RNA–Protein interactions for RNA: ENST00000554818.5

NUMB-213, Transcript of NUMB, endocytic adaptor protein, humanhuman

TSL 3

Gene NUMB, Length 552 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUMB-213ENST00000554818 NISCHQ9Y2I1 1504 aa36.16■■■■□ 3.38
NUMB-213ENST00000554818 CCDC180Q9P1Z9 1646 aa31.97■■■□□ 2.71
NUMB-213ENST00000554818 ABCC9O60706 1549 aa30.8■■■□□ 2.52
NUMB-213ENST00000554818 ZCCHC6Q5VYS8 1495 aaKnown RBP30.22■■■□□ 2.43
NUMB-213ENST00000554818 DCAF1Q9Y4B6 1507 aa29.99■■■□□ 2.39
NUMB-213ENST00000554818 MYO15BQ96JP2 1530 aa29.97■■■□□ 2.39
NUMB-213ENST00000554818 NACADO15069 1562 aa29.95■■■□□ 2.39
NUMB-213ENST00000554818 DCAF8L2P0C7V8 631 aa29.84■■■□□ 2.37
NUMB-213ENST00000554818 RB1CC1Q8TDY2 1594 aa29.84■■■□□ 2.37
NUMB-213ENST00000554818 UNC13AQ9UPW8 1703 aa29.24■■■□□ 2.27
NUMB-213ENST00000554818 SCRIBQ14160 1630 aa29.12■■■□□ 2.25
NUMB-213ENST00000554818 BICRAQ9NZM4 1560 aa29.01■■■□□ 2.24
NUMB-213ENST00000554818 PABPN1Q86U42 306 aaKnown RBP eCLIP28.84■■■□□ 2.21
NUMB-213ENST00000554818 SHROOM4Q9ULL8 1493 aa28.72■■■□□ 2.19
NUMB-213ENST00000554818 EIF4G1Q04637 1599 aaKnown RBP28.15■■■□□ 2.1
NUMB-213ENST00000554818 CECR2Q9BXF3 1484 aa28.12■■■□□ 2.09
NUMB-213ENST00000554818 DNAJC5BQ9UF47 199 aa27.99■■■□□ 2.07
NUMB-213ENST00000554818 BAZ1AQ9NRL2 1556 aaPredicted RBP27.96■■■□□ 2.07
NUMB-213ENST00000554818 SMARCA4P51532 1647 aa27.96■■■□□ 2.07
NUMB-213ENST00000554818 CC2D2AQ9P2K1 1620 aa27.92■■■□□ 2.06
NUMB-213ENST00000554818 MROH2BQ7Z745 1585 aa27.87■■■□□ 2.05
NUMB-213ENST00000554818 PEG3Q9GZU2 1588 aa27.73■■■□□ 2.03
NUMB-213ENST00000554818 ATAD2BQ9ULI0 1458 aa27.71■■■□□ 2.03
NUMB-213ENST00000554818 RSF1Q96T23 1441 aaPredicted RBP27.71■■■□□ 2.03
NUMB-213ENST00000554818 SMARCA2P51531 1590 aa27.67■■■□□ 2.02
NUMB-213ENST00000554818 NCAPD3P42695 1498 aa27.65■■■□□ 2.02
NUMB-213ENST00000554818 WIZO95785 1651 aa27.57■■■□□ 2
NUMB-213ENST00000554818 HMGXB3Q12766 1538 aa27.54■■■□□ 2
NUMB-213ENST00000554818 BAZ1BQ9UIG0 1483 aaKnown RBP27.44■■□□□ 1.98
NUMB-213ENST00000554818 TOP2AP11388 1531 aaKnown RBP27.31■■□□□ 1.96
NUMB-213ENST00000554818 SUPT5HO00267 1087 aaKnown RBP27.18■■□□□ 1.94
NUMB-213ENST00000554818 CCDC88BA6NC98 1476 aa27■■□□□ 1.91
NUMB-213ENST00000554818 CADPSQ9ULU8 1353 aa26.84■■□□□ 1.89
NUMB-213ENST00000554818 NESP48681 1621 aa26.82■■□□□ 1.88
NUMB-213ENST00000554818 LAMC3Q9Y6N6 1575 aa26.81■■□□□ 1.88
NUMB-213ENST00000554818 CFTRP13569 1480 aa26.79■■□□□ 1.88
NUMB-213ENST00000554818 PRDM2Q13029 1718 aa26.62■■□□□ 1.85
NUMB-213ENST00000554818 PDS5BQ9NTI5 1447 aa26.59■■□□□ 1.85
NUMB-213ENST00000554818 KIF21AQ7Z4S6 1674 aa26.51■■□□□ 1.83
NUMB-213ENST00000554818 FANCD2Q9BXW9 1451 aa26.5■■□□□ 1.83
NUMB-213ENST00000554818 ERCC6Q03468 1493 aa26.46■■□□□ 1.83
NUMB-213ENST00000554818 CEP164Q9UPV0 1460 aa26.41■■□□□ 1.82
NUMB-213ENST00000554818 THOC2Q8NI27 1593 aaKnown RBP26.35■■□□□ 1.81
NUMB-213ENST00000554818 MRC2Q9UBG0 1479 aa26.31■■□□□ 1.8
NUMB-213ENST00000554818 URB2Q14146 1524 aaKnown RBP26.25■■□□□ 1.79
NUMB-213ENST00000554818 WDR62O43379 1518 aa26.24■■□□□ 1.79
NUMB-213ENST00000554818 ABCC8Q09428 1581 aa26.16■■□□□ 1.78
NUMB-213ENST00000554818 TOPBP1Q92547 1522 aa26.15■■□□□ 1.78
NUMB-213ENST00000554818 DNMBPQ6XZF7 1577 aa26.15■■□□□ 1.78
NUMB-213ENST00000554818 CUX2O14529 1486 aa26.13■■□□□ 1.77
NUMB-213ENST00000554818 CUX1P39880 1505 aa26.13■■□□□ 1.77
NUMB-213ENST00000554818 WRNQ14191 1432 aaPredicted RBP eCLIP26.06■■□□□ 1.76
NUMB-213ENST00000554818 TOP2BQ02880 1626 aa26■■□□□ 1.75
NUMB-213ENST00000554818 BIVM-ERCC5R4GMW8 1640 aa26■■□□□ 1.75
NUMB-213ENST00000554818 SYNJ1O43426 1573 aa26■■□□□ 1.75
NUMB-213ENST00000554818 POLA1P09884 1462 aaPredicted RBP25.95■■□□□ 1.74
NUMB-213ENST00000554818 FGD5Q6ZNL6 1462 aa25.93■■□□□ 1.74
NUMB-213ENST00000554818 IFT140Q96RY7 1462 aa25.86■■□□□ 1.73
NUMB-213ENST00000554818 TARBP1Q13395 1621 aaKnown RBP25.86■■□□□ 1.73
NUMB-213ENST00000554818 SOGA1O94964 1423 aa25.82■■□□□ 1.72
NUMB-213ENST00000554818 RAD54L2Q9Y4B4 1467 aa25.82■■□□□ 1.72
NUMB-213ENST00000554818 WDR97A6NE52 1622 aa25.75■■□□□ 1.71
NUMB-213ENST00000554818 ABCA10Q8WWZ4 1543 aa25.74■■□□□ 1.71
NUMB-213ENST00000554818 ZNF608Q9ULD9 1512 aaPredicted RBP25.73■■□□□ 1.71
NUMB-213ENST00000554818 CHIC1Q5VXU3 224 aa25.71■■□□□ 1.71
NUMB-213ENST00000554818 TRIM41Q8WV44 630 aa25.66■■□□□ 1.7
NUMB-213ENST00000554818 EIF4G3O43432 1585 aaKnown RBP25.62■■□□□ 1.69
NUMB-213ENST00000554818 TDRD9Q8NDG6 1382 aaKnown RBP25.62■■□□□ 1.69
NUMB-213ENST00000554818 AQRO60306 1485 aaKnown RBP eCLIP25.61■■□□□ 1.69
NUMB-213ENST00000554818 ABCA5Q8WWZ7 1642 aa25.59■■□□□ 1.69
NUMB-213ENST00000554818 GAPVD1Q14C86 1478 aa25.53■■□□□ 1.68
NUMB-213ENST00000554818 GRIN2BQ13224 1484 aa25.48■■□□□ 1.67
NUMB-213ENST00000554818 KIF27Q86VH2 1401 aa25.47■■□□□ 1.67
NUMB-213ENST00000554818 PBRM1Q86U86 1689 aa25.46■■□□□ 1.67
NUMB-213ENST00000554818 ERICH3Q5RHP9 1530 aa25.42■■□□□ 1.66
NUMB-213ENST00000554818 RUSC2Q8N2Y8 1516 aa25.42■■□□□ 1.66
NUMB-213ENST00000554818 IGF1RP08069 1367 aa25.39■■□□□ 1.65
NUMB-213ENST00000554818 MAGI1Q96QZ7 1491 aaPredicted RBP25.39■■□□□ 1.65
NUMB-213ENST00000554818 SNAPC4Q5SXM2 1469 aa25.38■■□□□ 1.65
NUMB-213ENST00000554818 ADAMTS12P58397 1594 aa25.31■■□□□ 1.64
NUMB-213ENST00000554818 EEA1Q15075 1411 aa25.29■■□□□ 1.64
NUMB-213ENST00000554818 FHAD1B1AJZ9 1412 aa25.28■■□□□ 1.64
NUMB-213ENST00000554818 SYNJ2O15056 1496 aa25.28■■□□□ 1.64
NUMB-213ENST00000554818 CUL7Q14999 1698 aa25.25■■□□□ 1.63
NUMB-213ENST00000554818 CHD1O14646 1710 aa25.23■■□□□ 1.63
NUMB-213ENST00000554818 CARMIL1Q5VZK9 1371 aa25.2■■□□□ 1.63
NUMB-213ENST00000554818 CSRNP3Q8WYN3 585 aa25.18■■□□□ 1.62
NUMB-213ENST00000554818 GRIN2AQ12879 1464 aa25.16■■□□□ 1.62
NUMB-213ENST00000554818 PRXQ9BXM0 1461 aa25.16■■□□□ 1.62
NUMB-213ENST00000554818 CHMP7Q8WUX9 453 aaPredicted RBP25.16■■□□□ 1.62
NUMB-213ENST00000554818 FBLN2P98095 1184 aa25.11■■□□□ 1.61
NUMB-213ENST00000554818 RAPGEF2Q9Y4G8 1499 aa25.09■■□□□ 1.61
NUMB-213ENST00000554818 OSCARQ8IYS5 282 aa25.08■■□□□ 1.61
NUMB-213ENST00000554818 FAM9AQ8IZU1 332 aaPredicted RBP25.08■■□□□ 1.61
NUMB-213ENST00000554818 NUP160Q12769 1436 aa25.08■■□□□ 1.61
NUMB-213ENST00000554818 CEP170Q5SW79 1584 aa25.04■■□□□ 1.6
NUMB-213ENST00000554818 CLASP1Q7Z460 1538 aa25.01■■□□□ 1.59
NUMB-213ENST00000554818 KIF21BO75037 1637 aa25.01■■□□□ 1.59
NUMB-213ENST00000554818 KIAA0586Q9BVV6 1533 aa24.91■■□□□ 1.58
NUMB-213ENST00000554818 DNAJC5Q9H3Z4 198 aa24.85■■□□□ 1.57
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms