Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 ANLN-201ENST00000265748 4787 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 ZEB1-208ENST00000542815 3217 ntAPPRIS ALT2 TSL 2 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 POLR2B-203ENST00000431623 3666 ntTSL 2 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 NFIB-203ENST00000380934 2142 ntTSL 2 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 CDH18-201ENST00000274170 2809 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 IPCEF1-201ENST00000265198 6689 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 OR2AG2-202ENST00000641124 4224 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 OR2AG2-203ENST00000641169 4221 ntAPPRIS P1 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 NCAM2-202ENST00000400546 8135 ntAPPRIS P2 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SKP145-201ENST00000363291 303 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RNY1P2-201ENST00000364820 117 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 Y_RNA.510-201ENST00000384511 114 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 MT-TS1-201ENST00000387416 69 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 Y_RNA.606-201ENST00000410579 103 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 FAM183DP-201ENST00000421987 399 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 GH2-202ENST00000423893 819 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RPS27P18-201ENST00000431701 247 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 AC004692.1-201ENST00000455430 424 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 CHIAP1-201ENST00000456220 995 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 snoU13.28-201ENST00000459235 104 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL302P-201ENST00000475999 300 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL416P-201ENST00000494042 298 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL700P-201ENST00000496982 294 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 MRPL40P1-201ENST00000542687 604 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 AL355989.2-201ENST00000603304 512 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 FAM30B-201ENST00000611556 397 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 AC013553.3-201ENST00000612943 615 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 Metazoa_SRP.176-201ENST00000619772 282 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 AC005154.1-203ENST00000626245 451 ntTSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 LINC02495-203ENST00000636704 242 ntBASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 HEATR9-207ENST00000604834 1974 ntAPPRIS P3 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 EHHADH-201ENST00000231887 3850 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 ZFP90-201ENST00000398253 4384 ntAPPRIS P1 TSL 4 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 SPARCL1-202ENST00000418378 2994 ntAPPRIS P1 TSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 GDPD4-202ENST00000376217 2502 ntAPPRIS ALT2 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 AL359220.1-202ENST00000500036 4499 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 SNX16-202ENST00000353788 3032 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 MRRF-202ENST00000344641 9826 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RNF6-201ENST00000346166 3282 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 STK32B-207ENST00000512636 3272 ntTSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF658-206ENST00000621410 4025 ntAPPRIS P1 TSL 2 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 GRB10-207ENST00000402578 4760 ntTSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 PKP4-AS1-201ENST00000342892 4067 ntTSL 2 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 BDNF-205ENST00000395981 4071 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 TCF12-207ENST00000557843 4076 ntAPPRIS ALT1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 ADGRL3-213ENST00000509896 5069 ntTSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 KIDINS220-201ENST00000256707 7361 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 RAD18-201ENST00000264926 5886 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 NLRC4-203ENST00000402280 3355 ntAPPRIS P1 TSL 1 (best) BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 CSMD1-206ENST00000520002 11740 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 CSMD1-216ENST00000602557 11740 ntAPPRIS ALT2 TSL 5 BASIC3.88□□□□□ -1.79
KRTAP3-3Q9BYR6 CPM-201ENST00000338356 6636 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 LINC00276-202ENST00000418420 3503 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 OR14J1-203ENST00000641895 6443 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 XIAP-202ENST00000371199 8591 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ZNF37A-201ENST00000351773 7027 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 DLG1-202ENST00000357674 4931 ntAPPRIS ALT1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 GPCPD1-201ENST00000379019 5489 ntAPPRIS P1 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 CCDC150-201ENST00000389175 3685 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 DOCK11-202ENST00000276204 6664 ntAPPRIS ALT1 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 GPM6B-205ENST00000454189 3957 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 CDH2-202ENST00000399380 3737 ntTSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 FAM13C-216ENST00000618427 3458 ntAPPRIS ALT2 TSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AC105342.1-201ENST00000378334 6848 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AL359551.1-201ENST00000442726 2900 ntTSL 2 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ARHGEF7-208ENST00000426073 4921 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 RNA5SP223-201ENST00000365174 120 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR515-2-201ENST00000384883 83 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR515-1-201ENST00000384884 83 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 IGLV5-37-201ENST00000390300 374 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 RNU6-604P-201ENST00000390917 100 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AL031848.1-201ENST00000419034 351 ntTSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ATP6V0E1P3-201ENST00000420036 246 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 HSPB1P1-201ENST00000423240 256 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL337P-201ENST00000462468 301 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AL122013.1-201ENST00000473054 801 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 RN7SL403P-201ENST00000481783 305 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AC060765.1-202ENST00000518367 257 ntTSL 3 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 LINC02489-201ENST00000527239 354 ntTSL 3 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 TMEM269-202ENST00000536543 983 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 U1.22-201ENST00000605806 164 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 Metazoa_SRP.46-201ENST00000611137 251 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 5_8S_rRNA.2-201ENST00000612732 151 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 MIR6741-201ENST00000618782 63 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AL355987.5-201ENST00000621585 411 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AC112200.1-201ENST00000625015 234 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AC027279.3-201ENST00000625055 122 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 LYG2-206ENST00000626374 650 ntTSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 KRTAP9-1-202ENST00000634235 351 ntAPPRIS P1 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 AC007326.3-201ENST00000636418 176 ntBASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 SNCAIP-201ENST00000261367 4986 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 CSTF2T-201ENST00000331173 4105 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 VPS8-210ENST00000446204 4721 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 DNAH10-201ENST00000409039 14473 ntAPPRIS ALT2 TSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 HLTF-201ENST00000310053 5317 ntAPPRIS P3 TSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 PDXDC1-203ENST00000450288 4171 ntTSL 5 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 ANKRD49-208ENST00000544253 3002 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 WNT2B-203ENST00000369686 10879 ntTSL 1 (best) BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 USP26-201ENST00000370832 3642 ntAPPRIS P1 BASIC3.87□□□□□ -1.79
KRTAP3-3Q9BYR6 MAPK10-242ENST00000639242 3088 ntAPPRIS P2 TSL 5 BASIC3.87□□□□□ -1.79
Retrieved 100 of 98,524 protein–RNA pairs in 103.9 ms