RNA–Protein interactions for RNA: ENST00000605806.1

U1.22-201, humanhuman

BASIC

Gene U1, Length 164 nt, Biotype snRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
U1.22-201ENST00000605806 NISCHQ9Y2I1 1504 aa18.39■□□□□ 0.53
U1.22-201ENST00000605806 CCDC180Q9P1Z9 1646 aa16.17■□□□□ 0.18
U1.22-201ENST00000605806 ABCC9O60706 1549 aa15.5■□□□□ 0.07
U1.22-201ENST00000605806 DCAF8L2P0C7V8 631 aa15.39■□□□□ 0.05
U1.22-201ENST00000605806 ZCCHC6Q5VYS8 1495 aaKnown RBP15.39■□□□□ 0.05
U1.22-201ENST00000605806 DCAF1Q9Y4B6 1507 aa15.17■□□□□ 0.02
U1.22-201ENST00000605806 NACADO15069 1562 aa15.1■□□□□ 0.01
U1.22-201ENST00000605806 MYO15BQ96JP2 1530 aa15.06■□□□□ 0
U1.22-201ENST00000605806 RB1CC1Q8TDY2 1594 aa15.05■□□□□ -0
U1.22-201ENST00000605806 SHROOM4Q9ULL8 1493 aa14.94□□□□□ -0.02
U1.22-201ENST00000605806 SCRIBQ14160 1630 aa14.87□□□□□ -0.03
U1.22-201ENST00000605806 UNC13AQ9UPW8 1703 aa14.75□□□□□ -0.05
U1.22-201ENST00000605806 PABPN1Q86U42 306 aaKnown RBP eCLIP14.58□□□□□ -0.08
U1.22-201ENST00000605806 BICRAQ9NZM4 1560 aa14.54□□□□□ -0.08
U1.22-201ENST00000605806 CECR2Q9BXF3 1484 aa14.31□□□□□ -0.12
U1.22-201ENST00000605806 SUPT5HO00267 1087 aaKnown RBP14.28□□□□□ -0.12
U1.22-201ENST00000605806 BAZ1AQ9NRL2 1556 aaPredicted RBP14.24□□□□□ -0.13
U1.22-201ENST00000605806 MROH2BQ7Z745 1585 aa14.21□□□□□ -0.14
U1.22-201ENST00000605806 SMARCA4P51532 1647 aa14.2□□□□□ -0.14
U1.22-201ENST00000605806 RSF1Q96T23 1441 aaPredicted RBP14.16□□□□□ -0.14
U1.22-201ENST00000605806 EIF4G1Q04637 1599 aaKnown RBP14.14□□□□□ -0.15
U1.22-201ENST00000605806 WIZO95785 1651 aa14.12□□□□□ -0.15
U1.22-201ENST00000605806 CC2D2AQ9P2K1 1620 aa14.01□□□□□ -0.17
U1.22-201ENST00000605806 SMARCA2P51531 1590 aa14.01□□□□□ -0.17
U1.22-201ENST00000605806 ATAD2BQ9ULI0 1458 aa14□□□□□ -0.17
U1.22-201ENST00000605806 PEG3Q9GZU2 1588 aa13.99□□□□□ -0.17
U1.22-201ENST00000605806 BAZ1BQ9UIG0 1483 aaKnown RBP13.94□□□□□ -0.18
U1.22-201ENST00000605806 TOP2AP11388 1531 aaKnown RBP13.94□□□□□ -0.18
U1.22-201ENST00000605806 NCAPD3P42695 1498 aa13.9□□□□□ -0.18
U1.22-201ENST00000605806 HMGXB3Q12766 1538 aa13.88□□□□□ -0.19
U1.22-201ENST00000605806 DNAJC5BQ9UF47 199 aa13.81□□□□□ -0.2
U1.22-201ENST00000605806 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
U1.22-201ENST00000605806 CADPSQ9ULU8 1353 aa13.56□□□□□ -0.24
U1.22-201ENST00000605806 PRDM2Q13029 1718 aa13.54□□□□□ -0.24
U1.22-201ENST00000605806 CFTRP13569 1480 aa13.54□□□□□ -0.24
U1.22-201ENST00000605806 NESP48681 1621 aa13.52□□□□□ -0.25
U1.22-201ENST00000605806 LAMC3Q9Y6N6 1575 aa13.5□□□□□ -0.25
U1.22-201ENST00000605806 CHIC1Q5VXU3 224 aa13.49□□□□□ -0.25
U1.22-201ENST00000605806 ABCC8Q09428 1581 aa13.45□□□□□ -0.26
U1.22-201ENST00000605806 TRIM41Q8WV44 630 aa13.43□□□□□ -0.26
U1.22-201ENST00000605806 FANCD2Q9BXW9 1451 aa13.42□□□□□ -0.26
U1.22-201ENST00000605806 PDS5BQ9NTI5 1447 aa13.41□□□□□ -0.26
U1.22-201ENST00000605806 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
U1.22-201ENST00000605806 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
U1.22-201ENST00000605806 CEP164Q9UPV0 1460 aa13.37□□□□□ -0.27
U1.22-201ENST00000605806 ERCC6Q03468 1493 aa13.34□□□□□ -0.27
U1.22-201ENST00000605806 SYNJ1O43426 1573 aa13.32□□□□□ -0.28
U1.22-201ENST00000605806 CUX1P39880 1505 aa13.29□□□□□ -0.28
U1.22-201ENST00000605806 BIVM-ERCC5R4GMW8 1640 aa13.29□□□□□ -0.28
U1.22-201ENST00000605806 TOP2BQ02880 1626 aa13.28□□□□□ -0.28
U1.22-201ENST00000605806 DNMBPQ6XZF7 1577 aa13.27□□□□□ -0.29
U1.22-201ENST00000605806 TOPBP1Q92547 1522 aa13.25□□□□□ -0.29
U1.22-201ENST00000605806 MRC2Q9UBG0 1479 aa13.25□□□□□ -0.29
U1.22-201ENST00000605806 URB2Q14146 1524 aaKnown RBP13.24□□□□□ -0.29
U1.22-201ENST00000605806 FAM9AQ8IZU1 332 aaPredicted RBP13.21□□□□□ -0.29
U1.22-201ENST00000605806 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
U1.22-201ENST00000605806 THOC2Q8NI27 1593 aaKnown RBP13.19□□□□□ -0.3
U1.22-201ENST00000605806 WDR62O43379 1518 aa13.17□□□□□ -0.3
U1.22-201ENST00000605806 POLA1P09884 1462 aaPredicted RBP13.15□□□□□ -0.3
U1.22-201ENST00000605806 SOGA1O94964 1423 aa13.14□□□□□ -0.31
U1.22-201ENST00000605806 RAD54L2Q9Y4B4 1467 aa13.14□□□□□ -0.31
U1.22-201ENST00000605806 RUSC2Q8N2Y8 1516 aa13.11□□□□□ -0.31
U1.22-201ENST00000605806 CUX2O14529 1486 aa13.1□□□□□ -0.31
U1.22-201ENST00000605806 EEA1Q15075 1411 aa13.07□□□□□ -0.32
U1.22-201ENST00000605806 KIF27Q86VH2 1401 aa13.07□□□□□ -0.32
U1.22-201ENST00000605806 WDR97A6NE52 1622 aa13.06□□□□□ -0.32
U1.22-201ENST00000605806 EHMT2Q96KQ7 1210 aa13.06□□□□□ -0.32
U1.22-201ENST00000605806 ABCA10Q8WWZ4 1543 aa13.06□□□□□ -0.32
U1.22-201ENST00000605806 IFT140Q96RY7 1462 aa13.05□□□□□ -0.32
U1.22-201ENST00000605806 TARBP1Q13395 1621 aaKnown RBP13.05□□□□□ -0.32
U1.22-201ENST00000605806 CSRNP3Q8WYN3 585 aa13.04□□□□□ -0.32
U1.22-201ENST00000605806 TDRD9Q8NDG6 1382 aaKnown RBP13.02□□□□□ -0.33
U1.22-201ENST00000605806 LOC105371045A0A1W2PR82 267 aa13□□□□□ -0.33
U1.22-201ENST00000605806 GAPVD1Q14C86 1478 aa12.98□□□□□ -0.33
U1.22-201ENST00000605806 ABCA5Q8WWZ7 1642 aa12.98□□□□□ -0.33
U1.22-201ENST00000605806 ZNF608Q9ULD9 1512 aaPredicted RBP12.98□□□□□ -0.33
U1.22-201ENST00000605806 AQRO60306 1485 aaKnown RBP eCLIP12.97□□□□□ -0.33
U1.22-201ENST00000605806 PBRM1Q86U86 1689 aa12.97□□□□□ -0.33
U1.22-201ENST00000605806 EIF4G3O43432 1585 aaKnown RBP12.95□□□□□ -0.34
U1.22-201ENST00000605806 IGF1RP08069 1367 aa12.94□□□□□ -0.34
U1.22-201ENST00000605806 KIF21BO75037 1637 aa12.92□□□□□ -0.34
U1.22-201ENST00000605806 ERICH3Q5RHP9 1530 aa12.92□□□□□ -0.34
U1.22-201ENST00000605806 GRIN2BQ13224 1484 aa12.91□□□□□ -0.34
U1.22-201ENST00000605806 UBTFP17480 764 aaKnown RBP12.91□□□□□ -0.34
U1.22-201ENST00000605806 CUL7Q14999 1698 aa12.91□□□□□ -0.34
U1.22-201ENST00000605806 CARMIL1Q5VZK9 1371 aa12.91□□□□□ -0.34
U1.22-201ENST00000605806 GOLGA3Q08378 1498 aa12.91□□□□□ -0.34
U1.22-201ENST00000605806 PRXQ9BXM0 1461 aa12.88□□□□□ -0.35
U1.22-201ENST00000605806 RAPGEF2Q9Y4G8 1499 aa12.87□□□□□ -0.35
U1.22-201ENST00000605806 SNAPC4Q5SXM2 1469 aa12.86□□□□□ -0.35
U1.22-201ENST00000605806 ADAMTS12P58397 1594 aa12.84□□□□□ -0.35
U1.22-201ENST00000605806 FHAD1B1AJZ9 1412 aa12.83□□□□□ -0.36
U1.22-201ENST00000605806 FBLN2P98095 1184 aa12.83□□□□□ -0.36
U1.22-201ENST00000605806 MAGI1Q96QZ7 1491 aaPredicted RBP12.81□□□□□ -0.36
U1.22-201ENST00000605806 RANGAP1P46060 587 aaPredicted RBP12.81□□□□□ -0.36
U1.22-201ENST00000605806 CHMP7Q8WUX9 453 aaPredicted RBP12.81□□□□□ -0.36
U1.22-201ENST00000605806 TNIKQ9UKE5 1360 aa12.81□□□□□ -0.36
U1.22-201ENST00000605806 SYNJ2O15056 1496 aa12.77□□□□□ -0.37
U1.22-201ENST00000605806 CTTNBP2Q8WZ74 1663 aa12.77□□□□□ -0.37
U1.22-201ENST00000605806 CHD1O14646 1710 aa12.75□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 33.7 ms