RNA–Protein interactions for RNA: ENST00000402280.5

NLRC4-203, Transcript of NLR family CARD domain containing 4, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene NLRC4, Length 3,355 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NLRC4-203ENST00000402280 NISCHQ9Y2I1 1504 aa10.55□□□□□ -0.72
NLRC4-203ENST00000402280 CCDC180Q9P1Z9 1646 aa9.53□□□□□ -0.88
NLRC4-203ENST00000402280 PELP1Q8IZL8 1130 aaKnown RBP9.12□□□□□ -0.95
NLRC4-203ENST00000402280 DCAF1Q9Y4B6 1507 aa8.97□□□□□ -0.97
NLRC4-203ENST00000402280 MYO15BQ96JP2 1530 aa8.96□□□□□ -0.97
NLRC4-203ENST00000402280 MYT1Q01538 1121 aa8.92□□□□□ -0.98
NLRC4-203ENST00000402280 ZCCHC6Q5VYS8 1495 aaKnown RBP8.89□□□□□ -0.99
NLRC4-203ENST00000402280 AEBP2Q6ZN18 517 aaPredicted RBP8.86□□□□□ -0.99
NLRC4-203ENST00000402280 NACADO15069 1562 aa8.77□□□□□ -1.01
NLRC4-203ENST00000402280 SLC24A1O60721 1099 aa8.74□□□□□ -1.01
NLRC4-203ENST00000402280 ABCC9O60706 1549 aa8.73□□□□□ -1.01
NLRC4-203ENST00000402280 HRCP23327 699 aa8.7□□□□□ -1.02
NLRC4-203ENST00000402280 RB1CC1Q8TDY2 1594 aa8.65□□□□□ -1.02
NLRC4-203ENST00000402280 UNC13AQ9UPW8 1703 aa8.64□□□□□ -1.03
NLRC4-203ENST00000402280 PRKCSHP14314 528 aaPredicted RBP8.61□□□□□ -1.03
NLRC4-203ENST00000402280 TTBK1Q5TCY1 1321 aaPredicted RBP8.57□□□□□ -1.04
NLRC4-203ENST00000402280 SHROOM4Q9ULL8 1493 aa8.56□□□□□ -1.04
NLRC4-203ENST00000402280 CHIC1Q5VXU3 224 aa8.5□□□□□ -1.05
NLRC4-203ENST00000402280 BICRAQ9NZM4 1560 aa8.46□□□□□ -1.05
NLRC4-203ENST00000402280 PPARGC1BQ86YN6 1023 aaKnown RBP8.46□□□□□ -1.06
NLRC4-203ENST00000402280 SCAF1Q9H7N4 1312 aaKnown RBP8.46□□□□□ -1.06
NLRC4-203ENST00000402280 SCRIBQ14160 1630 aa8.39□□□□□ -1.07
NLRC4-203ENST00000402280 ERICH6Q7L0X2 663 aa8.37□□□□□ -1.07
NLRC4-203ENST00000402280 APLP2Q06481 763 aa8.34□□□□□ -1.07
NLRC4-203ENST00000402280 PCGF6Q9BYE7 350 aa8.31□□□□□ -1.08
NLRC4-203ENST00000402280 PEG3Q9GZU2 1588 aa8.27□□□□□ -1.09
NLRC4-203ENST00000402280 DCAF8L2P0C7V8 631 aa8.21□□□□□ -1.09
NLRC4-203ENST00000402280 BCL11AQ9H165 835 aa8.21□□□□□ -1.1
NLRC4-203ENST00000402280 DAXXQ9UER7 740 aaPredicted RBP8.19□□□□□ -1.1
NLRC4-203ENST00000402280 SMARCA4P51532 1647 aa8.18□□□□□ -1.1
NLRC4-203ENST00000402280 BAZ1AQ9NRL2 1556 aaPredicted RBP8.17□□□□□ -1.1
NLRC4-203ENST00000402280 ACIN1Q9UKV3 1341 aaKnown RBP8.14□□□□□ -1.11
NLRC4-203ENST00000402280 EIF4G1Q04637 1599 aaKnown RBP8.14□□□□□ -1.11
NLRC4-203ENST00000402280 CENPBP07199 599 aaPredicted RBP8.12□□□□□ -1.11
NLRC4-203ENST00000402280 SMARCA2P51531 1590 aa8.11□□□□□ -1.11
NLRC4-203ENST00000402280 FAM9AQ8IZU1 332 aaPredicted RBP8.11□□□□□ -1.11
NLRC4-203ENST00000402280 HMGXB3Q12766 1538 aa8.1□□□□□ -1.11
NLRC4-203ENST00000402280 GTF3C3Q9Y5Q9 886 aa8.1□□□□□ -1.11
NLRC4-203ENST00000402280 NEUROD1Q13562 356 aa8.08□□□□□ -1.12
NLRC4-203ENST00000402280 ZEB1P37275 1124 aaPredicted RBP8.07□□□□□ -1.12
NLRC4-203ENST00000402280 CECR2Q9BXF3 1484 aa8.07□□□□□ -1.12
NLRC4-203ENST00000402280 PABPN1Q86U42 306 aaKnown RBP eCLIP8.07□□□□□ -1.12
NLRC4-203ENST00000402280 CC2D2AQ9P2K1 1620 aa8.07□□□□□ -1.12
NLRC4-203ENST00000402280 MROH2BQ7Z745 1585 aa8.06□□□□□ -1.12
NLRC4-203ENST00000402280 NCAPD3P42695 1498 aa8.03□□□□□ -1.12
NLRC4-203ENST00000402280 RSF1Q96T23 1441 aaPredicted RBP8.02□□□□□ -1.13
NLRC4-203ENST00000402280 TOP2AP11388 1531 aaKnown RBP8.02□□□□□ -1.13
NLRC4-203ENST00000402280 PRDM2Q13029 1718 aa8.01□□□□□ -1.13
NLRC4-203ENST00000402280 WIZO95785 1651 aa8.01□□□□□ -1.13
NLRC4-203ENST00000402280 ATAD2BQ9ULI0 1458 aa7.99□□□□□ -1.13
NLRC4-203ENST00000402280 EIF5BO60841 1220 aaKnown RBP7.97□□□□□ -1.13
NLRC4-203ENST00000402280 TRIM26Q12899 539 aaPredicted RBP7.95□□□□□ -1.14
NLRC4-203ENST00000402280 ANP32EQ9BTT0 268 aa7.93□□□□□ -1.14
NLRC4-203ENST00000402280 SUPT5HO00267 1087 aaKnown RBP7.93□□□□□ -1.14
NLRC4-203ENST00000402280 DNAJC5BQ9UF47 199 aa7.87□□□□□ -1.15
NLRC4-203ENST00000402280 BAZ1BQ9UIG0 1483 aaKnown RBP7.87□□□□□ -1.15
NLRC4-203ENST00000402280 PLEKHG5O94827 1062 aa7.85□□□□□ -1.15
NLRC4-203ENST00000402280 CSRNP3Q8WYN3 585 aa7.84□□□□□ -1.15
NLRC4-203ENST00000402280 LAMC3Q9Y6N6 1575 aa7.82□□□□□ -1.16
NLRC4-203ENST00000402280 PHF23Q9BUL5 403 aaPredicted RBP7.81□□□□□ -1.16
NLRC4-203ENST00000402280 CCDC88BA6NC98 1476 aa7.79□□□□□ -1.16
NLRC4-203ENST00000402280 DIEXFQ68CQ4 756 aaKnown RBP7.78□□□□□ -1.16
NLRC4-203ENST00000402280 CFTRP13569 1480 aa7.78□□□□□ -1.16
NLRC4-203ENST00000402280 DNAJC5Q9H3Z4 198 aa7.77□□□□□ -1.17
NLRC4-203ENST00000402280 KIF21AQ7Z4S6 1674 aa7.74□□□□□ -1.17
NLRC4-203ENST00000402280 BIVM-ERCC5R4GMW8 1640 aa7.74□□□□□ -1.17
NLRC4-203ENST00000402280 THOC2Q8NI27 1593 aaKnown RBP7.69□□□□□ -1.18
NLRC4-203ENST00000402280 WDR97A6NE52 1622 aa7.69□□□□□ -1.18
NLRC4-203ENST00000402280 LOC105371045A0A1W2PR82 267 aa7.68□□□□□ -1.18
NLRC4-203ENST00000402280 NCBP3Q53F19 620 aaKnown RBP7.68□□□□□ -1.18
NLRC4-203ENST00000402280 YTHDC1Q96MU7 727 aaKnown RBP7.68□□□□□ -1.18
NLRC4-203ENST00000402280 TSHZ2Q9NRE2 1034 aa7.68□□□□□ -1.18
NLRC4-203ENST00000402280 CADPSQ9ULU8 1353 aa7.67□□□□□ -1.18
NLRC4-203ENST00000402280 NESP48681 1621 aa7.66□□□□□ -1.18
NLRC4-203ENST00000402280 PLPPR3Q6T4P5 718 aa7.66□□□□□ -1.18
NLRC4-203ENST00000402280 TOP2BQ02880 1626 aa7.65□□□□□ -1.18
NLRC4-203ENST00000402280 WDR62O43379 1518 aa7.65□□□□□ -1.18
NLRC4-203ENST00000402280 PODXL2Q9NZ53 605 aa7.65□□□□□ -1.19
NLRC4-203ENST00000402280 ANO8Q9HCE9 1232 aaPredicted RBP7.64□□□□□ -1.19
NLRC4-203ENST00000402280 DNMBPQ6XZF7 1577 aa7.63□□□□□ -1.19
NLRC4-203ENST00000402280 ABCC8Q09428 1581 aa7.62□□□□□ -1.19
NLRC4-203ENST00000402280 CLSPNQ9HAW4 1339 aa7.61□□□□□ -1.19
NLRC4-203ENST00000402280 KLHL34Q8N239 644 aa7.59□□□□□ -1.19
NLRC4-203ENST00000402280 SUPT16HQ9Y5B9 1047 aaKnown RBP7.59□□□□□ -1.19
NLRC4-203ENST00000402280 FANCD2Q9BXW9 1451 aa7.59□□□□□ -1.19
NLRC4-203ENST00000402280 UBE2Q2Q8WVN8 375 aa7.58□□□□□ -1.2
NLRC4-203ENST00000402280 RTN4Q9NQC3 1192 aaKnown RBP7.58□□□□□ -1.2
NLRC4-203ENST00000402280 SYNJ1O43426 1573 aa7.58□□□□□ -1.2
NLRC4-203ENST00000402280 TRIM41Q8WV44 630 aa7.58□□□□□ -1.2
NLRC4-203ENST00000402280 EHMT2Q96KQ7 1210 aa7.58□□□□□ -1.2
NLRC4-203ENST00000402280 PDS5BQ9NTI5 1447 aa7.58□□□□□ -1.2
NLRC4-203ENST00000402280 CUX1P39880 1505 aa7.58□□□□□ -1.2
NLRC4-203ENST00000402280 TARBP1Q13395 1621 aaKnown RBP7.58□□□□□ -1.2
NLRC4-203ENST00000402280 URB2Q14146 1524 aaKnown RBP7.57□□□□□ -1.2
NLRC4-203ENST00000402280 CEP164Q9UPV0 1460 aa7.57□□□□□ -1.2
NLRC4-203ENST00000402280 CCER1Q8TC90 406 aaPredicted RBP7.56□□□□□ -1.2
NLRC4-203ENST00000402280 MRC2Q9UBG0 1479 aa7.56□□□□□ -1.2
NLRC4-203ENST00000402280 ABCA5Q8WWZ7 1642 aa7.54□□□□□ -1.2
NLRC4-203ENST00000402280 TOPBP1Q92547 1522 aa7.54□□□□□ -1.2
NLRC4-203ENST00000402280 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP7.53□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 79.5 ms