RNA–Protein interactions for RNA: ENST00000494042.3

RN7SL416P-201, Transcript of RNA, 7SL, cytoplasmic 416, pseudogene, humanhuman

BASIC

Gene RN7SL416P, Length 298 nt, Biotype misc RNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RN7SL416P-201ENST00000494042 NISCHQ9Y2I1 1504 aa19.05■□□□□ 0.64
RN7SL416P-201ENST00000494042 ABCC9O60706 1549 aa17.31■□□□□ 0.36
RN7SL416P-201ENST00000494042 CCDC180Q9P1Z9 1646 aa17.15■□□□□ 0.34
RN7SL416P-201ENST00000494042 RB1CC1Q8TDY2 1594 aa16.36■□□□□ 0.21
RN7SL416P-201ENST00000494042 DNAJC5BQ9UF47 199 aa16.29■□□□□ 0.2
RN7SL416P-201ENST00000494042 UNC13AQ9UPW8 1703 aa16.23■□□□□ 0.19
RN7SL416P-201ENST00000494042 NACADO15069 1562 aa16.13■□□□□ 0.17
RN7SL416P-201ENST00000494042 PABPN1Q86U42 306 aaKnown RBP eCLIP15.97■□□□□ 0.15
RN7SL416P-201ENST00000494042 DCAF8L2P0C7V8 631 aa15.95■□□□□ 0.14
RN7SL416P-201ENST00000494042 ZCCHC6Q5VYS8 1495 aaKnown RBP15.93■□□□□ 0.14
RN7SL416P-201ENST00000494042 BICRAQ9NZM4 1560 aa15.92■□□□□ 0.14
RN7SL416P-201ENST00000494042 DCAF1Q9Y4B6 1507 aa15.78■□□□□ 0.12
RN7SL416P-201ENST00000494042 MYO15BQ96JP2 1530 aa15.74■□□□□ 0.11
RN7SL416P-201ENST00000494042 CC2D2AQ9P2K1 1620 aa15.67■□□□□ 0.1
RN7SL416P-201ENST00000494042 SCRIBQ14160 1630 aa15.66■□□□□ 0.1
RN7SL416P-201ENST00000494042 CECR2Q9BXF3 1484 aa15.56■□□□□ 0.08
RN7SL416P-201ENST00000494042 SHROOM4Q9ULL8 1493 aa15.55■□□□□ 0.08
RN7SL416P-201ENST00000494042 EIF4G1Q04637 1599 aaKnown RBP15.54■□□□□ 0.08
RN7SL416P-201ENST00000494042 DNAJC5Q9H3Z4 198 aa15.06■□□□□ 0
RN7SL416P-201ENST00000494042 ERCC6Q03468 1493 aa14.95□□□□□ -0.02
RN7SL416P-201ENST00000494042 CUX2O14529 1486 aa14.94□□□□□ -0.02
RN7SL416P-201ENST00000494042 SMARCA4P51532 1647 aa14.85□□□□□ -0.03
RN7SL416P-201ENST00000494042 NESP48681 1621 aa14.81□□□□□ -0.04
RN7SL416P-201ENST00000494042 HMGXB3Q12766 1538 aa14.81□□□□□ -0.04
RN7SL416P-201ENST00000494042 NCAPD3P42695 1498 aa14.8□□□□□ -0.04
RN7SL416P-201ENST00000494042 THOC2Q8NI27 1593 aaKnown RBP14.79□□□□□ -0.04
RN7SL416P-201ENST00000494042 ATAD2BQ9ULI0 1458 aa14.79□□□□□ -0.04
RN7SL416P-201ENST00000494042 KIF21AQ7Z4S6 1674 aa14.78□□□□□ -0.04
RN7SL416P-201ENST00000494042 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
RN7SL416P-201ENST00000494042 MROH2BQ7Z745 1585 aa14.7□□□□□ -0.06
RN7SL416P-201ENST00000494042 RSF1Q96T23 1441 aaPredicted RBP14.7□□□□□ -0.06
RN7SL416P-201ENST00000494042 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
RN7SL416P-201ENST00000494042 BAZ1AQ9NRL2 1556 aaPredicted RBP14.66□□□□□ -0.06
RN7SL416P-201ENST00000494042 LAMC3Q9Y6N6 1575 aa14.64□□□□□ -0.07
RN7SL416P-201ENST00000494042 PEG3Q9GZU2 1588 aa14.61□□□□□ -0.07
RN7SL416P-201ENST00000494042 WIZO95785 1651 aa14.47□□□□□ -0.09
RN7SL416P-201ENST00000494042 TRIM41Q8WV44 630 aa14.47□□□□□ -0.09
RN7SL416P-201ENST00000494042 SUPT5HO00267 1087 aaKnown RBP14.46□□□□□ -0.09
RN7SL416P-201ENST00000494042 WDR62O43379 1518 aa14.45□□□□□ -0.1
RN7SL416P-201ENST00000494042 MRC2Q9UBG0 1479 aa14.44□□□□□ -0.1
RN7SL416P-201ENST00000494042 PDS5BQ9NTI5 1447 aa14.44□□□□□ -0.1
RN7SL416P-201ENST00000494042 CEP164Q9UPV0 1460 aa14.35□□□□□ -0.11
RN7SL416P-201ENST00000494042 TOP2AP11388 1531 aaKnown RBP14.35□□□□□ -0.11
RN7SL416P-201ENST00000494042 PRDM2Q13029 1718 aa14.34□□□□□ -0.11
RN7SL416P-201ENST00000494042 CADPSQ9ULU8 1353 aa14.34□□□□□ -0.11
RN7SL416P-201ENST00000494042 FANCD2Q9BXW9 1451 aa14.28□□□□□ -0.12
RN7SL416P-201ENST00000494042 CCDC88BA6NC98 1476 aa14.26□□□□□ -0.13
RN7SL416P-201ENST00000494042 URB2Q14146 1524 aaKnown RBP14.21□□□□□ -0.13
RN7SL416P-201ENST00000494042 RIMBP3CA6NJZ7 1639 aa14.2□□□□□ -0.14
RN7SL416P-201ENST00000494042 RIMBP3BA6NNM3 1639 aa14.2□□□□□ -0.14
RN7SL416P-201ENST00000494042 RIMBP3Q9UFD9 1639 aa14.2□□□□□ -0.14
RN7SL416P-201ENST00000494042 CFTRP13569 1480 aa14.17□□□□□ -0.14
RN7SL416P-201ENST00000494042 CHD1O14646 1710 aa14.12□□□□□ -0.15
RN7SL416P-201ENST00000494042 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
RN7SL416P-201ENST00000494042 OSCARQ8IYS5 282 aa14.09□□□□□ -0.15
RN7SL416P-201ENST00000494042 ZNF608Q9ULD9 1512 aaPredicted RBP14.08□□□□□ -0.16
RN7SL416P-201ENST00000494042 ARHGEF11O15085 1522 aa14.06□□□□□ -0.16
RN7SL416P-201ENST00000494042 IFT140Q96RY7 1462 aa14.01□□□□□ -0.17
RN7SL416P-201ENST00000494042 TOPBP1Q92547 1522 aa14□□□□□ -0.17
RN7SL416P-201ENST00000494042 DNMBPQ6XZF7 1577 aa13.97□□□□□ -0.17
RN7SL416P-201ENST00000494042 TARBP1Q13395 1621 aaKnown RBP13.96□□□□□ -0.17
RN7SL416P-201ENST00000494042 ARAP1Q96P48 1450 aa13.9□□□□□ -0.18
RN7SL416P-201ENST00000494042 AQRO60306 1485 aaKnown RBP eCLIP13.87□□□□□ -0.19
RN7SL416P-201ENST00000494042 ABCC8Q09428 1581 aa13.85□□□□□ -0.19
RN7SL416P-201ENST00000494042 CYB5RLQ6IPT4 315 aa13.84□□□□□ -0.19
RN7SL416P-201ENST00000494042 POLA1P09884 1462 aaPredicted RBP13.84□□□□□ -0.19
RN7SL416P-201ENST00000494042 PBRM1Q86U86 1689 aa13.82□□□□□ -0.2
RN7SL416P-201ENST00000494042 FBLN2P98095 1184 aa13.81□□□□□ -0.2
RN7SL416P-201ENST00000494042 WDR97A6NE52 1622 aa13.81□□□□□ -0.2
RN7SL416P-201ENST00000494042 RAD54L2Q9Y4B4 1467 aa13.8□□□□□ -0.2
RN7SL416P-201ENST00000494042 TRHP20396 242 aaPredicted RBP13.8□□□□□ -0.2
RN7SL416P-201ENST00000494042 CHIC1Q5VXU3 224 aa13.79□□□□□ -0.2
RN7SL416P-201ENST00000494042 SNAPC4Q5SXM2 1469 aa13.79□□□□□ -0.2
RN7SL416P-201ENST00000494042 CLASP1Q7Z460 1538 aa13.79□□□□□ -0.2
RN7SL416P-201ENST00000494042 SYNJ1O43426 1573 aa13.76□□□□□ -0.21
RN7SL416P-201ENST00000494042 WRNQ14191 1432 aaPredicted RBP eCLIP13.76□□□□□ -0.21
RN7SL416P-201ENST00000494042 CUX1P39880 1505 aa13.75□□□□□ -0.21
RN7SL416P-201ENST00000494042 FGD5Q6ZNL6 1462 aa13.75□□□□□ -0.21
RN7SL416P-201ENST00000494042 TDRD9Q8NDG6 1382 aaKnown RBP13.72□□□□□ -0.21
RN7SL416P-201ENST00000494042 SOGA1O94964 1423 aa13.69□□□□□ -0.22
RN7SL416P-201ENST00000494042 MAGI1Q96QZ7 1491 aaPredicted RBP13.67□□□□□ -0.22
RN7SL416P-201ENST00000494042 TOP2BQ02880 1626 aa13.65□□□□□ -0.22
RN7SL416P-201ENST00000494042 ABCA5Q8WWZ7 1642 aa13.64□□□□□ -0.23
RN7SL416P-201ENST00000494042 SYNJ2O15056 1496 aa13.64□□□□□ -0.23
RN7SL416P-201ENST00000494042 GRIN2BQ13224 1484 aa13.64□□□□□ -0.23
RN7SL416P-201ENST00000494042 ERCC6L2Q5T890 1561 aa13.61□□□□□ -0.23
RN7SL416P-201ENST00000494042 CHMP7Q8WUX9 453 aaPredicted RBP13.6□□□□□ -0.23
RN7SL416P-201ENST00000494042 BIVM-ERCC5R4GMW8 1640 aa13.6□□□□□ -0.23
RN7SL416P-201ENST00000494042 GAPVD1Q14C86 1478 aa13.6□□□□□ -0.23
RN7SL416P-201ENST00000494042 ADAMTS12P58397 1594 aa13.58□□□□□ -0.24
RN7SL416P-201ENST00000494042 KIF13AQ9H1H9 1805 aa13.57□□□□□ -0.24
RN7SL416P-201ENST00000494042 AEBP2Q6ZN18 517 aaPredicted RBP13.56□□□□□ -0.24
RN7SL416P-201ENST00000494042 CEP170Q5SW79 1584 aa13.55□□□□□ -0.24
RN7SL416P-201ENST00000494042 ABCA10Q8WWZ4 1543 aa13.54□□□□□ -0.24
RN7SL416P-201ENST00000494042 SHROOM2Q13796 1616 aa13.5□□□□□ -0.25
RN7SL416P-201ENST00000494042 GRIN2AQ12879 1464 aa13.5□□□□□ -0.25
RN7SL416P-201ENST00000494042 RUSC2Q8N2Y8 1516 aa13.49□□□□□ -0.25
RN7SL416P-201ENST00000494042 IGF1RP08069 1367 aa13.47□□□□□ -0.25
RN7SL416P-201ENST00000494042 KIF27Q86VH2 1401 aa13.43□□□□□ -0.26
RN7SL416P-201ENST00000494042 NUP160Q12769 1436 aa13.41□□□□□ -0.26
Retrieved 100 of 20,778 RNA–protein pairs in 68.1 ms