RNA–Protein interactions for RNA: ENST00000376217.6

GDPD4-202, Transcript of glycerophosphodiester phosphodiesterase domain containing 4, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene GDPD4, Length 2,502 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GDPD4-202ENST00000376217 NISCHQ9Y2I1 1504 aa13.74□□□□□ -0.21
GDPD4-202ENST00000376217 HRCP23327 699 aa12.72□□□□□ -0.37
GDPD4-202ENST00000376217 PELP1Q8IZL8 1130 aaKnown RBP12.65□□□□□ -0.38
GDPD4-202ENST00000376217 PCGF6Q9BYE7 350 aa12.33□□□□□ -0.44
GDPD4-202ENST00000376217 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
GDPD4-202ENST00000376217 MYT1Q01538 1121 aa12.27□□□□□ -0.45
GDPD4-202ENST00000376217 SUPT5HO00267 1087 aaKnown RBP12.21□□□□□ -0.45
GDPD4-202ENST00000376217 MYO15BQ96JP2 1530 aa12.19□□□□□ -0.46
GDPD4-202ENST00000376217 SHROOM4Q9ULL8 1493 aa12.18□□□□□ -0.46
GDPD4-202ENST00000376217 DCAF1Q9Y4B6 1507 aa12.11□□□□□ -0.47
GDPD4-202ENST00000376217 CHIC1Q5VXU3 224 aa12.09□□□□□ -0.47
GDPD4-202ENST00000376217 SCAF1Q9H7N4 1312 aaKnown RBP12.06□□□□□ -0.48
GDPD4-202ENST00000376217 ZEB1P37275 1124 aaPredicted RBP12.02□□□□□ -0.48
GDPD4-202ENST00000376217 CCDC180Q9P1Z9 1646 aa12.02□□□□□ -0.49
GDPD4-202ENST00000376217 TRIM26Q12899 539 aaPredicted RBP11.98□□□□□ -0.49
GDPD4-202ENST00000376217 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
GDPD4-202ENST00000376217 LOC105371045A0A1W2PR82 267 aa11.76□□□□□ -0.53
GDPD4-202ENST00000376217 ZCCHC6Q5VYS8 1495 aaKnown RBP11.73□□□□□ -0.53
GDPD4-202ENST00000376217 CENPBP07199 599 aaPredicted RBP11.7□□□□□ -0.54
GDPD4-202ENST00000376217 NEUROD1Q13562 356 aa11.68□□□□□ -0.54
GDPD4-202ENST00000376217 GTF3C3Q9Y5Q9 886 aa11.66□□□□□ -0.54
GDPD4-202ENST00000376217 TTBK1Q5TCY1 1321 aaPredicted RBP11.55□□□□□ -0.56
GDPD4-202ENST00000376217 DIEXFQ68CQ4 756 aaKnown RBP11.5□□□□□ -0.57
GDPD4-202ENST00000376217 CCER1Q8TC90 406 aaPredicted RBP11.43□□□□□ -0.58
GDPD4-202ENST00000376217 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.36□□□□□ -0.59
GDPD4-202ENST00000376217 TRIM41Q8WV44 630 aa11.33□□□□□ -0.6
GDPD4-202ENST00000376217 DCAF8L2P0C7V8 631 aa11.32□□□□□ -0.6
GDPD4-202ENST00000376217 YTHDC1Q96MU7 727 aaKnown RBP11.29□□□□□ -0.6
GDPD4-202ENST00000376217 FAM9AQ8IZU1 332 aaPredicted RBP11.27□□□□□ -0.61
GDPD4-202ENST00000376217 ZNF316A6NFI3 1004 aaPredicted RBP11.27□□□□□ -0.61
GDPD4-202ENST00000376217 BCL11AQ9H165 835 aa11.27□□□□□ -0.61
GDPD4-202ENST00000376217 CLSPNQ9HAW4 1339 aa11.22□□□□□ -0.61
GDPD4-202ENST00000376217 ANP32EQ9BTT0 268 aa11.22□□□□□ -0.61
GDPD4-202ENST00000376217 ABCC9O60706 1549 aa11.21□□□□□ -0.61
GDPD4-202ENST00000376217 EHMT2Q96KQ7 1210 aa11.18□□□□□ -0.62
GDPD4-202ENST00000376217 MIER1Q8N108 512 aa11.14□□□□□ -0.63
GDPD4-202ENST00000376217 RB1CC1Q8TDY2 1594 aa11.09□□□□□ -0.63
GDPD4-202ENST00000376217 RSF1Q96T23 1441 aaPredicted RBP11.08□□□□□ -0.64
GDPD4-202ENST00000376217 SUPT16HQ9Y5B9 1047 aaKnown RBP11.07□□□□□ -0.64
GDPD4-202ENST00000376217 TSHZ2Q9NRE2 1034 aa11.06□□□□□ -0.64
GDPD4-202ENST00000376217 WRNQ14191 1432 aaPredicted RBP eCLIP11.04□□□□□ -0.64
GDPD4-202ENST00000376217 CSRNP3Q8WYN3 585 aa11.03□□□□□ -0.64
GDPD4-202ENST00000376217 CEP162Q5TB80 1403 aa10.92□□□□□ -0.66
GDPD4-202ENST00000376217 PRKCSHP14314 528 aaPredicted RBP10.88□□□□□ -0.67
GDPD4-202ENST00000376217 SCRIBQ14160 1630 aa10.86□□□□□ -0.67
GDPD4-202ENST00000376217 TNIKQ9UKE5 1360 aa10.84□□□□□ -0.67
GDPD4-202ENST00000376217 ERICH6Q7L0X2 663 aa10.83□□□□□ -0.68
GDPD4-202ENST00000376217 HNRNPUL2Q1KMD3 747 aaKnown RBP10.82□□□□□ -0.68
GDPD4-202ENST00000376217 RBM19Q9Y4C8 960 aaKnown RBP10.8□□□□□ -0.68
GDPD4-202ENST00000376217 BCANQ96GW7 911 aa10.79□□□□□ -0.68
GDPD4-202ENST00000376217 EIF4G1Q04637 1599 aaKnown RBP10.78□□□□□ -0.68
GDPD4-202ENST00000376217 NEFLP07196 543 aa10.77□□□□□ -0.69
GDPD4-202ENST00000376217 FKBP8Q14318 412 aa10.76□□□□□ -0.69
GDPD4-202ENST00000376217 MYT1LQ9UL68 1186 aa10.76□□□□□ -0.69
GDPD4-202ENST00000376217 EEA1Q15075 1411 aa10.75□□□□□ -0.69
GDPD4-202ENST00000376217 UBTFP17480 764 aaKnown RBP10.74□□□□□ -0.69
GDPD4-202ENST00000376217 GOLGA3Q08378 1498 aa10.72□□□□□ -0.69
GDPD4-202ENST00000376217 MROH2BQ7Z745 1585 aa10.71□□□□□ -0.69
GDPD4-202ENST00000376217 WIZO95785 1651 aa10.7□□□□□ -0.7
GDPD4-202ENST00000376217 ABCC8Q09428 1581 aa10.7□□□□□ -0.7
GDPD4-202ENST00000376217 BAZ1AQ9NRL2 1556 aaPredicted RBP10.7□□□□□ -0.7
GDPD4-202ENST00000376217 CCDC88BA6NC98 1476 aa10.7□□□□□ -0.7
GDPD4-202ENST00000376217 FANCIQ9NVI1 1328 aa10.68□□□□□ -0.7
GDPD4-202ENST00000376217 APLP2Q06481 763 aa10.67□□□□□ -0.7
GDPD4-202ENST00000376217 CECR2Q9BXF3 1484 aa10.67□□□□□ -0.7
GDPD4-202ENST00000376217 MSH5O43196 834 aa10.66□□□□□ -0.7
GDPD4-202ENST00000376217 SOGA1O94964 1423 aa10.66□□□□□ -0.7
GDPD4-202ENST00000376217 DHX57Q6P158 1386 aaKnown RBP10.66□□□□□ -0.7
GDPD4-202ENST00000376217 VPS8Q8N3P4 1428 aa10.62□□□□□ -0.71
GDPD4-202ENST00000376217 ITGAEP38570 1179 aa10.61□□□□□ -0.71
GDPD4-202ENST00000376217 KCNH8Q96L42 1107 aa10.6□□□□□ -0.71
GDPD4-202ENST00000376217 CDK11AQ9UQ88 783 aaPredicted RBP10.6□□□□□ -0.71
GDPD4-202ENST00000376217 CLIP1P30622 1438 aa10.6□□□□□ -0.71
GDPD4-202ENST00000376217 DEKP35659 375 aaKnown RBP10.6□□□□□ -0.71
GDPD4-202ENST00000376217 NACADO15069 1562 aa10.59□□□□□ -0.71
GDPD4-202ENST00000376217 CEP164Q9UPV0 1460 aa10.58□□□□□ -0.72
GDPD4-202ENST00000376217 KIF21BO75037 1637 aa10.57□□□□□ -0.72
GDPD4-202ENST00000376217 RUSC2Q8N2Y8 1516 aa10.56□□□□□ -0.72
GDPD4-202ENST00000376217 TOP2AP11388 1531 aaKnown RBP10.55□□□□□ -0.72
GDPD4-202ENST00000376217 ERICH6BQ5W0A0 696 aa10.54□□□□□ -0.72
GDPD4-202ENST00000376217 CCER2I3L3R5 266 aa10.52□□□□□ -0.72
GDPD4-202ENST00000376217 BAZ1BQ9UIG0 1483 aaKnown RBP10.52□□□□□ -0.73
GDPD4-202ENST00000376217 SMARCA2P51531 1590 aa10.5□□□□□ -0.73
GDPD4-202ENST00000376217 DDX10Q13206 875 aaKnown RBP10.49□□□□□ -0.73
GDPD4-202ENST00000376217 TRIM52Q96A61 297 aa10.49□□□□□ -0.73
GDPD4-202ENST00000376217 ANO8Q9HCE9 1232 aaPredicted RBP10.49□□□□□ -0.73
GDPD4-202ENST00000376217 ANP32CO43423 234 aa10.49□□□□□ -0.73
GDPD4-202ENST00000376217 CUX2O14529 1486 aa10.48□□□□□ -0.73
GDPD4-202ENST00000376217 NOP58Q9Y2X3 529 aaKnown RBP10.45□□□□□ -0.74
GDPD4-202ENST00000376217 RRBP1Q9P2E9 1410 aaKnown RBP10.44□□□□□ -0.74
GDPD4-202ENST00000376217 PPP1R15AO75807 674 aaPredicted RBP10.43□□□□□ -0.74
GDPD4-202ENST00000376217 RTL5Q5HYW3 569 aaPredicted RBP10.43□□□□□ -0.74
GDPD4-202ENST00000376217 NBR1Q14596 966 aa10.42□□□□□ -0.74
GDPD4-202ENST00000376217 PPP4R2Q9NY27 417 aa10.41□□□□□ -0.74
GDPD4-202ENST00000376217 SALL2Q9Y467 1007 aaPredicted RBP10.4□□□□□ -0.74
GDPD4-202ENST00000376217 MAPKBP1O60336 1514 aa10.39□□□□□ -0.75
GDPD4-202ENST00000376217 WDR97A6NE52 1622 aa10.39□□□□□ -0.75
GDPD4-202ENST00000376217 RAPGEF2Q9Y4G8 1499 aa10.39□□□□□ -0.75
GDPD4-202ENST00000376217 IRX6P78412 446 aaPredicted RBP10.39□□□□□ -0.75
GDPD4-202ENST00000376217 CCNB3Q8WWL7 1395 aa10.39□□□□□ -0.75
Retrieved 100 of 20,778 RNA–protein pairs in 16.1 ms