RNA–Protein interactions for RNA: ENST00000338356.7

CPM-201, Transcript of carboxypeptidase M, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CPM, Length 6,636 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPM-201ENST00000338356 DCAF8L2P0C7V8 631 aa14.96□□□□□ -0.02
CPM-201ENST00000338356 NISCHQ9Y2I1 1504 aa14.25□□□□□ -0.13
CPM-201ENST00000338356 FAM9AQ8IZU1 332 aaPredicted RBP13.94□□□□□ -0.18
CPM-201ENST00000338356 SUPT5HO00267 1087 aaKnown RBP13.9□□□□□ -0.19
CPM-201ENST00000338356 EHMT2Q96KQ7 1210 aa13.78□□□□□ -0.2
CPM-201ENST00000338356 SHROOM4Q9ULL8 1493 aa13.76□□□□□ -0.21
CPM-201ENST00000338356 PELP1Q8IZL8 1130 aaKnown RBP13.55□□□□□ -0.24
CPM-201ENST00000338356 TTBK1Q5TCY1 1321 aaPredicted RBP13.35□□□□□ -0.27
CPM-201ENST00000338356 PCGF6Q9BYE7 350 aa13.33□□□□□ -0.28
CPM-201ENST00000338356 ERICH6Q7L0X2 663 aa13.24□□□□□ -0.29
CPM-201ENST00000338356 APLP2Q06481 763 aa13.14□□□□□ -0.31
CPM-201ENST00000338356 CENPBP07199 599 aaPredicted RBP13.1□□□□□ -0.31
CPM-201ENST00000338356 YTHDC1Q96MU7 727 aaKnown RBP13.07□□□□□ -0.32
CPM-201ENST00000338356 CCER1Q8TC90 406 aaPredicted RBP13.01□□□□□ -0.33
CPM-201ENST00000338356 RANGAP1P46060 587 aaPredicted RBP13□□□□□ -0.33
CPM-201ENST00000338356 ZEB1P37275 1124 aaPredicted RBP12.97□□□□□ -0.33
CPM-201ENST00000338356 ABCC9O60706 1549 aa12.92□□□□□ -0.34
CPM-201ENST00000338356 MYT1Q01538 1121 aa12.9□□□□□ -0.34
CPM-201ENST00000338356 MYT1LQ9UL68 1186 aa12.88□□□□□ -0.35
CPM-201ENST00000338356 PPARGC1BQ86YN6 1023 aaKnown RBP12.83□□□□□ -0.36
CPM-201ENST00000338356 ATP1B4Q9UN42 357 aaPredicted RBP12.83□□□□□ -0.36
CPM-201ENST00000338356 NEFLP07196 543 aa12.78□□□□□ -0.36
CPM-201ENST00000338356 TRIM41Q8WV44 630 aa12.77□□□□□ -0.37
CPM-201ENST00000338356 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.67□□□□□ -0.38
CPM-201ENST00000338356 HNRNPUL2Q1KMD3 747 aaKnown RBP12.67□□□□□ -0.38
CPM-201ENST00000338356 HRCP23327 699 aa12.66□□□□□ -0.38
CPM-201ENST00000338356 PABPN1Q86U42 306 aaKnown RBP eCLIP12.64□□□□□ -0.39
CPM-201ENST00000338356 UBTFP17480 764 aaKnown RBP12.63□□□□□ -0.39
CPM-201ENST00000338356 TRIM26Q12899 539 aaPredicted RBP12.62□□□□□ -0.39
CPM-201ENST00000338356 DAXXQ9UER7 740 aaPredicted RBP12.47□□□□□ -0.41
CPM-201ENST00000338356 FBLN2P98095 1184 aa12.46□□□□□ -0.41
CPM-201ENST00000338356 LOC105371045A0A1W2PR82 267 aa12.45□□□□□ -0.42
CPM-201ENST00000338356 POLR3GLQ9BT43 218 aa12.44□□□□□ -0.42
CPM-201ENST00000338356 ITGAEP38570 1179 aa12.43□□□□□ -0.42
CPM-201ENST00000338356 CNGB1Q14028 1251 aaPredicted RBP12.42□□□□□ -0.42
CPM-201ENST00000338356 NPM1P06748 294 aaKnown RBP eCLIP12.41□□□□□ -0.42
CPM-201ENST00000338356 ESF1Q9H501 851 aaKnown RBP12.35□□□□□ -0.43
CPM-201ENST00000338356 DIEXFQ68CQ4 756 aaKnown RBP12.33□□□□□ -0.43
CPM-201ENST00000338356 CHIC1Q5VXU3 224 aa12.32□□□□□ -0.44
CPM-201ENST00000338356 BCANQ96GW7 911 aa12.3□□□□□ -0.44
CPM-201ENST00000338356 GTF3C3Q9Y5Q9 886 aa12.28□□□□□ -0.44
CPM-201ENST00000338356 ZNF316A6NFI3 1004 aaPredicted RBP12.27□□□□□ -0.44
CPM-201ENST00000338356 RTL5Q5HYW3 569 aaPredicted RBP12.26□□□□□ -0.45
CPM-201ENST00000338356 RB1CC1Q8TDY2 1594 aa12.21□□□□□ -0.46
CPM-201ENST00000338356 SLC4A1APQ9BWU0 796 aaKnown RBP12.13□□□□□ -0.47
CPM-201ENST00000338356 ERCC6Q03468 1493 aa12.12□□□□□ -0.47
CPM-201ENST00000338356 CLSPNQ9HAW4 1339 aa12.12□□□□□ -0.47
CPM-201ENST00000338356 NEUROD1Q13562 356 aa12.09□□□□□ -0.47
CPM-201ENST00000338356 FAM50AQ14320 339 aaKnown RBP12.06□□□□□ -0.48
CPM-201ENST00000338356 CCDC180Q9P1Z9 1646 aa12.05□□□□□ -0.48
CPM-201ENST00000338356 CDK11AQ9UQ88 783 aaPredicted RBP12.05□□□□□ -0.48
CPM-201ENST00000338356 TRHP20396 242 aaPredicted RBP12.04□□□□□ -0.48
CPM-201ENST00000338356 AEBP2Q6ZN18 517 aaPredicted RBP12.02□□□□□ -0.49
CPM-201ENST00000338356 SCRIBQ14160 1630 aa12.02□□□□□ -0.49
CPM-201ENST00000338356 ACIN1Q9UKV3 1341 aaKnown RBP12.01□□□□□ -0.49
CPM-201ENST00000338356 PLPPR3Q6T4P5 718 aa12□□□□□ -0.49
CPM-201ENST00000338356 STAG3Q9UJ98 1225 aa11.98□□□□□ -0.49
CPM-201ENST00000338356 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
CPM-201ENST00000338356 TRIM52Q96A61 297 aa11.97□□□□□ -0.49
CPM-201ENST00000338356 ANP32CO43423 234 aa11.96□□□□□ -0.49
CPM-201ENST00000338356 NPM2Q86SE8 214 aaKnown RBP11.92□□□□□ -0.5
CPM-201ENST00000338356 NACADO15069 1562 aa11.9□□□□□ -0.5
CPM-201ENST00000338356 BCL11AQ9H165 835 aa11.89□□□□□ -0.51
CPM-201ENST00000338356 ZNF326Q5BKZ1 582 aaKnown RBP11.88□□□□□ -0.51
CPM-201ENST00000338356 ARID4BQ4LE39 1312 aaPredicted RBP11.84□□□□□ -0.51
CPM-201ENST00000338356 ANP32AP39687 249 aaKnown RBP11.84□□□□□ -0.51
CPM-201ENST00000338356 CANXP27824 592 aaKnown RBP11.83□□□□□ -0.52
CPM-201ENST00000338356 FKBP8Q14318 412 aa11.83□□□□□ -0.52
CPM-201ENST00000338356 EIF5BO60841 1220 aaKnown RBP11.81□□□□□ -0.52
CPM-201ENST00000338356 SCAF1Q9H7N4 1312 aaKnown RBP11.79□□□□□ -0.52
CPM-201ENST00000338356 NBR1Q14596 966 aa11.79□□□□□ -0.52
CPM-201ENST00000338356 ZNF777Q9ULD5 760 aaPredicted RBP11.74□□□□□ -0.53
CPM-201ENST00000338356 ZBTB47Q9UFB7 747 aaPredicted RBP11.74□□□□□ -0.53
CPM-201ENST00000338356 SLC24A1O60721 1099 aa11.72□□□□□ -0.53
CPM-201ENST00000338356 NEFMP07197 916 aa11.71□□□□□ -0.53
CPM-201ENST00000338356 C14orf37Q86TY3 774 aa11.69□□□□□ -0.54
CPM-201ENST00000338356 ARID3CA6NKF2 412 aa11.69□□□□□ -0.54
CPM-201ENST00000338356 CHGAP10645 457 aaKnown RBP11.67□□□□□ -0.54
CPM-201ENST00000338356 DCAF1Q9Y4B6 1507 aa11.67□□□□□ -0.54
CPM-201ENST00000338356 ARXQ96QS3 562 aa11.67□□□□□ -0.54
CPM-201ENST00000338356 HAP1P54257 671 aaPredicted RBP11.66□□□□□ -0.54
CPM-201ENST00000338356 BAZ1BQ9UIG0 1483 aaKnown RBP11.66□□□□□ -0.54
CPM-201ENST00000338356 P3H3Q8IVL6 736 aa11.65□□□□□ -0.54
CPM-201ENST00000338356 IRX6P78412 446 aaPredicted RBP11.63□□□□□ -0.55
CPM-201ENST00000338356 FAM9BQ8IZU0 186 aa11.62□□□□□ -0.55
CPM-201ENST00000338356 PPP1R15AO75807 674 aaPredicted RBP11.62□□□□□ -0.55
CPM-201ENST00000338356 HNRNPUQ00839 825 aaKnown RBP eCLIP11.6□□□□□ -0.55
CPM-201ENST00000338356 PDS5BQ9NTI5 1447 aa11.6□□□□□ -0.55
CPM-201ENST00000338356 MYO15BQ96JP2 1530 aa11.6□□□□□ -0.55
CPM-201ENST00000338356 SALL2Q9Y467 1007 aaPredicted RBP11.59□□□□□ -0.55
CPM-201ENST00000338356 DDX10Q13206 875 aaKnown RBP11.58□□□□□ -0.56
CPM-201ENST00000338356 ANP32BQ92688 251 aaKnown RBP11.58□□□□□ -0.56
CPM-201ENST00000338356 KCNH8Q96L42 1107 aa11.56□□□□□ -0.56
CPM-201ENST00000338356 GLIPR1L2Q4G1C9 344 aa11.56□□□□□ -0.56
CPM-201ENST00000338356 MIER1Q8N108 512 aa11.55□□□□□ -0.56
CPM-201ENST00000338356 HSP90AA1P07900 732 aaKnown RBP11.55□□□□□ -0.56
CPM-201ENST00000338356 PLEKHD1A6NEE1 506 aa11.54□□□□□ -0.56
CPM-201ENST00000338356 CECR2Q9BXF3 1484 aa11.54□□□□□ -0.56
CPM-201ENST00000338356 A0A0G2JS52 829 aa11.54□□□□□ -0.56
CPM-201ENST00000338356 TSPY4P0CV99 314 aa11.53□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms