RNA–Protein interactions for RNA: ENST00000346166.7

RNF6-201, Transcript of ring finger protein 6, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RNF6, Length 3,282 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF6-201ENST00000346166 NISCHQ9Y2I1 1504 aa9.58□□□□□ -0.88
RNF6-201ENST00000346166 CCDC180Q9P1Z9 1646 aa9.17□□□□□ -0.94
RNF6-201ENST00000346166 AEBP2Q6ZN18 517 aaPredicted RBP8.83□□□□□ -1
RNF6-201ENST00000346166 MYO15BQ96JP2 1530 aa8.69□□□□□ -1.02
RNF6-201ENST00000346166 CHIC1Q5VXU3 224 aa8.56□□□□□ -1.04
RNF6-201ENST00000346166 SHROOM4Q9ULL8 1493 aa8.53□□□□□ -1.04
RNF6-201ENST00000346166 DCAF1Q9Y4B6 1507 aa8.49□□□□□ -1.05
RNF6-201ENST00000346166 NACADO15069 1562 aa8.37□□□□□ -1.07
RNF6-201ENST00000346166 RB1CC1Q8TDY2 1594 aa8.26□□□□□ -1.09
RNF6-201ENST00000346166 UNC13AQ9UPW8 1703 aa8.24□□□□□ -1.09
RNF6-201ENST00000346166 ZCCHC6Q5VYS8 1495 aaKnown RBP8.07□□□□□ -1.12
RNF6-201ENST00000346166 BICRAQ9NZM4 1560 aa8.04□□□□□ -1.12
RNF6-201ENST00000346166 ABCC9O60706 1549 aa7.87□□□□□ -1.15
RNF6-201ENST00000346166 PEG3Q9GZU2 1588 aa7.87□□□□□ -1.15
RNF6-201ENST00000346166 SMARCA2P51531 1590 aa7.79□□□□□ -1.16
RNF6-201ENST00000346166 HMGXB3Q12766 1538 aa7.72□□□□□ -1.17
RNF6-201ENST00000346166 PRDM2Q13029 1718 aa7.7□□□□□ -1.18
RNF6-201ENST00000346166 SENP3Q9H4L4 574 aaPredicted RBP7.69□□□□□ -1.18
RNF6-201ENST00000346166 EIF4G1Q04637 1599 aaKnown RBP7.68□□□□□ -1.18
RNF6-201ENST00000346166 CC2D2AQ9P2K1 1620 aa7.62□□□□□ -1.19
RNF6-201ENST00000346166 NCAPD3P42695 1498 aa7.57□□□□□ -1.2
RNF6-201ENST00000346166 WDR97A6NE52 1622 aa7.55□□□□□ -1.2
RNF6-201ENST00000346166 SMARCA4P51532 1647 aa7.53□□□□□ -1.2
RNF6-201ENST00000346166 CUX2O14529 1486 aa7.51□□□□□ -1.21
RNF6-201ENST00000346166 BAZ1AQ9NRL2 1556 aaPredicted RBP7.49□□□□□ -1.21
RNF6-201ENST00000346166 LAMC3Q9Y6N6 1575 aa7.49□□□□□ -1.21
RNF6-201ENST00000346166 SCRIBQ14160 1630 aa7.46□□□□□ -1.22
RNF6-201ENST00000346166 PHF23Q9BUL5 403 aaPredicted RBP7.46□□□□□ -1.22
RNF6-201ENST00000346166 THOC2Q8NI27 1593 aaKnown RBP7.45□□□□□ -1.22
RNF6-201ENST00000346166 BAZ1BQ9UIG0 1483 aaKnown RBP7.38□□□□□ -1.23
RNF6-201ENST00000346166 ATAD2BQ9ULI0 1458 aa7.35□□□□□ -1.23
RNF6-201ENST00000346166 WDR62O43379 1518 aa7.35□□□□□ -1.23
RNF6-201ENST00000346166 CECR2Q9BXF3 1484 aa7.35□□□□□ -1.23
RNF6-201ENST00000346166 TOP2AP11388 1531 aaKnown RBP7.3□□□□□ -1.24
RNF6-201ENST00000346166 KIF21AQ7Z4S6 1674 aa7.24□□□□□ -1.25
RNF6-201ENST00000346166 DNAJC5BQ9UF47 199 aa7.2□□□□□ -1.26
RNF6-201ENST00000346166 ABCC8Q09428 1581 aa7.2□□□□□ -1.26
RNF6-201ENST00000346166 CFTRP13569 1480 aa7.18□□□□□ -1.26
RNF6-201ENST00000346166 MROH2BQ7Z745 1585 aa7.14□□□□□ -1.27
RNF6-201ENST00000346166 MRC2Q9UBG0 1479 aa7.13□□□□□ -1.27
RNF6-201ENST00000346166 BIVM-ERCC5R4GMW8 1640 aa7.12□□□□□ -1.27
RNF6-201ENST00000346166 TARBP1Q13395 1621 aaKnown RBP7.11□□□□□ -1.27
RNF6-201ENST00000346166 DNMBPQ6XZF7 1577 aa7.09□□□□□ -1.27
RNF6-201ENST00000346166 WIZO95785 1651 aa7.09□□□□□ -1.28
RNF6-201ENST00000346166 SLC24A1O60721 1099 aa7.09□□□□□ -1.28
RNF6-201ENST00000346166 PDS5BQ9NTI5 1447 aa7.09□□□□□ -1.28
RNF6-201ENST00000346166 SHROOM2Q13796 1616 aa7.05□□□□□ -1.28
RNF6-201ENST00000346166 CADPSQ9ULU8 1353 aa7.04□□□□□ -1.28
RNF6-201ENST00000346166 ABCA5Q8WWZ7 1642 aa7.03□□□□□ -1.28
RNF6-201ENST00000346166 FOXD1Q16676 465 aa7.03□□□□□ -1.28
RNF6-201ENST00000346166 NESP48681 1621 aa7.03□□□□□ -1.28
RNF6-201ENST00000346166 CLASP1Q7Z460 1538 aa7.01□□□□□ -1.29
RNF6-201ENST00000346166 IFT140Q96RY7 1462 aa7.01□□□□□ -1.29
RNF6-201ENST00000346166 RSF1Q96T23 1441 aaPredicted RBP7□□□□□ -1.29
RNF6-201ENST00000346166 PBRM1Q86U86 1689 aa7□□□□□ -1.29
RNF6-201ENST00000346166 CEP164Q9UPV0 1460 aa6.98□□□□□ -1.29
RNF6-201ENST00000346166 URB2Q14146 1524 aaKnown RBP6.95□□□□□ -1.3
RNF6-201ENST00000346166 EIF4G3O43432 1585 aaKnown RBP6.94□□□□□ -1.3
RNF6-201ENST00000346166 TOP2BQ02880 1626 aa6.93□□□□□ -1.3
RNF6-201ENST00000346166 PABPN1Q86U42 306 aaKnown RBP eCLIP6.93□□□□□ -1.3
RNF6-201ENST00000346166 FANCD2Q9BXW9 1451 aa6.93□□□□□ -1.3
RNF6-201ENST00000346166 MAGI1Q96QZ7 1491 aaPredicted RBP6.91□□□□□ -1.3
RNF6-201ENST00000346166 TOPBP1Q92547 1522 aa6.91□□□□□ -1.3
RNF6-201ENST00000346166 CHD1O14646 1710 aa6.91□□□□□ -1.3
RNF6-201ENST00000346166 ERICH3Q5RHP9 1530 aa6.9□□□□□ -1.3
RNF6-201ENST00000346166 CUL7Q14999 1698 aa6.9□□□□□ -1.31
RNF6-201ENST00000346166 ABCA10Q8WWZ4 1543 aa6.89□□□□□ -1.31
RNF6-201ENST00000346166 CCDC88BA6NC98 1476 aa6.88□□□□□ -1.31
RNF6-201ENST00000346166 ADAMTS12P58397 1594 aa6.86□□□□□ -1.31
RNF6-201ENST00000346166 DNAJC5Q9H3Z4 198 aa6.86□□□□□ -1.31
RNF6-201ENST00000346166 PLPPR3Q6T4P5 718 aa6.84□□□□□ -1.31
RNF6-201ENST00000346166 ERCC6Q03468 1493 aa6.84□□□□□ -1.31
RNF6-201ENST00000346166 RIMBP3CA6NJZ7 1639 aa6.84□□□□□ -1.32
RNF6-201ENST00000346166 RIMBP3BA6NNM3 1639 aa6.84□□□□□ -1.32
RNF6-201ENST00000346166 RIMBP3Q9UFD9 1639 aa6.84□□□□□ -1.32
RNF6-201ENST00000346166 SYNJ1O43426 1573 aa6.84□□□□□ -1.32
RNF6-201ENST00000346166 CUX1P39880 1505 aa6.8□□□□□ -1.32
RNF6-201ENST00000346166 GLI2P10070 1586 aa6.79□□□□□ -1.32
RNF6-201ENST00000346166 NUP160Q12769 1436 aa6.79□□□□□ -1.32
RNF6-201ENST00000346166 RUSC2Q8N2Y8 1516 aa6.78□□□□□ -1.32
RNF6-201ENST00000346166 POLA1P09884 1462 aaPredicted RBP6.77□□□□□ -1.33
RNF6-201ENST00000346166 MAPKBP1O60336 1514 aa6.76□□□□□ -1.33
RNF6-201ENST00000346166 SYNJ2O15056 1496 aa6.76□□□□□ -1.33
RNF6-201ENST00000346166 MSH5O43196 834 aa6.75□□□□□ -1.33
RNF6-201ENST00000346166 GRIN2BQ13224 1484 aa6.74□□□□□ -1.33
RNF6-201ENST00000346166 UHRF1BP1LA0JNW5 1464 aa6.73□□□□□ -1.33
RNF6-201ENST00000346166 CTTNBP2Q8WZ74 1663 aa6.72□□□□□ -1.33
RNF6-201ENST00000346166 KIF13AQ9H1H9 1805 aa6.72□□□□□ -1.33
RNF6-201ENST00000346166 ARHGEF11O15085 1522 aa6.7□□□□□ -1.34
RNF6-201ENST00000346166 CEP170Q5SW79 1584 aa6.68□□□□□ -1.34
RNF6-201ENST00000346166 KDM5BQ9UGL1 1544 aa6.68□□□□□ -1.34
RNF6-201ENST00000346166 FGD5Q6ZNL6 1462 aa6.67□□□□□ -1.34
RNF6-201ENST00000346166 UGGT2Q9NYU1 1516 aa6.67□□□□□ -1.34
RNF6-201ENST00000346166 MAP3K4Q9Y6R4 1608 aa6.66□□□□□ -1.34
RNF6-201ENST00000346166 PPRC1Q5VV67 1664 aaKnown RBP6.65□□□□□ -1.34
RNF6-201ENST00000346166 FHAD1B1AJZ9 1412 aa6.65□□□□□ -1.35
RNF6-201ENST00000346166 KIAA0586Q9BVV6 1533 aa6.64□□□□□ -1.35
RNF6-201ENST00000346166 GRIN2AQ12879 1464 aa6.64□□□□□ -1.35
RNF6-201ENST00000346166 EHMT2Q96KQ7 1210 aa6.64□□□□□ -1.35
RNF6-201ENST00000346166 SAMD9Q5K651 1589 aa6.63□□□□□ -1.35
Retrieved 100 of 20,778 RNA–protein pairs in 12.5 ms