RNA–Protein interactions for RNA: ENST00000264926.6

RAD18-201, Transcript of RAD18, E3 ubiquitin protein ligase, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene RAD18, Length 5,886 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RAD18-201ENST00000264926 NISCHQ9Y2I1 1504 aa13.93□□□□□ -0.18
RAD18-201ENST00000264926 PELP1Q8IZL8 1130 aaKnown RBP13.63□□□□□ -0.23
RAD18-201ENST00000264926 DCAF8L2P0C7V8 631 aa13.49□□□□□ -0.25
RAD18-201ENST00000264926 MYT1Q01538 1121 aa13.42□□□□□ -0.26
RAD18-201ENST00000264926 SUPT5HO00267 1087 aaKnown RBP13.3□□□□□ -0.28
RAD18-201ENST00000264926 ZEB1P37275 1124 aaPredicted RBP13.24□□□□□ -0.29
RAD18-201ENST00000264926 CENPBP07199 599 aaPredicted RBP13.07□□□□□ -0.32
RAD18-201ENST00000264926 SHROOM4Q9ULL8 1493 aa12.99□□□□□ -0.33
RAD18-201ENST00000264926 CCER1Q8TC90 406 aaPredicted RBP12.96□□□□□ -0.33
RAD18-201ENST00000264926 APLP2Q06481 763 aa12.93□□□□□ -0.34
RAD18-201ENST00000264926 ERICH6Q7L0X2 663 aa12.81□□□□□ -0.36
RAD18-201ENST00000264926 PCGF6Q9BYE7 350 aa12.81□□□□□ -0.36
RAD18-201ENST00000264926 FAM9AQ8IZU1 332 aaPredicted RBP12.64□□□□□ -0.39
RAD18-201ENST00000264926 HRCP23327 699 aa12.62□□□□□ -0.39
RAD18-201ENST00000264926 TRIM26Q12899 539 aaPredicted RBP12.6□□□□□ -0.39
RAD18-201ENST00000264926 NEFLP07196 543 aa12.6□□□□□ -0.39
RAD18-201ENST00000264926 TRIM41Q8WV44 630 aa12.55□□□□□ -0.4
RAD18-201ENST00000264926 EHMT2Q96KQ7 1210 aa12.48□□□□□ -0.41
RAD18-201ENST00000264926 YTHDC1Q96MU7 727 aaKnown RBP12.39□□□□□ -0.43
RAD18-201ENST00000264926 UBTFP17480 764 aaKnown RBP12.27□□□□□ -0.45
RAD18-201ENST00000264926 TTBK1Q5TCY1 1321 aaPredicted RBP12.22□□□□□ -0.45
RAD18-201ENST00000264926 CHIC1Q5VXU3 224 aa12.18□□□□□ -0.46
RAD18-201ENST00000264926 DAXXQ9UER7 740 aaPredicted RBP12.18□□□□□ -0.46
RAD18-201ENST00000264926 CLSPNQ9HAW4 1339 aa12.17□□□□□ -0.46
RAD18-201ENST00000264926 DIEXFQ68CQ4 756 aaKnown RBP12.1□□□□□ -0.47
RAD18-201ENST00000264926 RTL5Q5HYW3 569 aaPredicted RBP12.06□□□□□ -0.48
RAD18-201ENST00000264926 ATP1B4Q9UN42 357 aaPredicted RBP12□□□□□ -0.49
RAD18-201ENST00000264926 DCAF1Q9Y4B6 1507 aa12□□□□□ -0.49
RAD18-201ENST00000264926 RANGAP1P46060 587 aaPredicted RBP11.97□□□□□ -0.49
RAD18-201ENST00000264926 MYT1LQ9UL68 1186 aa11.97□□□□□ -0.49
RAD18-201ENST00000264926 ZNF316A6NFI3 1004 aaPredicted RBP11.91□□□□□ -0.5
RAD18-201ENST00000264926 ACIN1Q9UKV3 1341 aaKnown RBP11.91□□□□□ -0.5
RAD18-201ENST00000264926 PPARGC1BQ86YN6 1023 aaKnown RBP11.9□□□□□ -0.5
RAD18-201ENST00000264926 LOC105371045A0A1W2PR82 267 aa11.9□□□□□ -0.5
RAD18-201ENST00000264926 GTF3C3Q9Y5Q9 886 aa11.89□□□□□ -0.51
RAD18-201ENST00000264926 CDK11AQ9UQ88 783 aaPredicted RBP11.88□□□□□ -0.51
RAD18-201ENST00000264926 HNRNPUL2Q1KMD3 747 aaKnown RBP11.83□□□□□ -0.52
RAD18-201ENST00000264926 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.81□□□□□ -0.52
RAD18-201ENST00000264926 ANP32CO43423 234 aa11.81□□□□□ -0.52
RAD18-201ENST00000264926 CCDC180Q9P1Z9 1646 aa11.73□□□□□ -0.53
RAD18-201ENST00000264926 ITGAEP38570 1179 aa11.7□□□□□ -0.54
RAD18-201ENST00000264926 ANP32AP39687 249 aaKnown RBP11.7□□□□□ -0.54
RAD18-201ENST00000264926 ZCCHC6Q5VYS8 1495 aaKnown RBP11.67□□□□□ -0.54
RAD18-201ENST00000264926 POLR3GLQ9BT43 218 aa11.64□□□□□ -0.55
RAD18-201ENST00000264926 GLIPR1L2Q4G1C9 344 aa11.62□□□□□ -0.55
RAD18-201ENST00000264926 FAM50AQ14320 339 aaKnown RBP11.6□□□□□ -0.55
RAD18-201ENST00000264926 BCANQ96GW7 911 aa11.54□□□□□ -0.56
RAD18-201ENST00000264926 TRIM52Q96A61 297 aa11.54□□□□□ -0.56
RAD18-201ENST00000264926 NEUROD1Q13562 356 aa11.52□□□□□ -0.57
RAD18-201ENST00000264926 ZBTB47Q9UFB7 747 aaPredicted RBP11.51□□□□□ -0.57
RAD18-201ENST00000264926 CSRNP3Q8WYN3 585 aa11.51□□□□□ -0.57
RAD18-201ENST00000264926 EEA1Q15075 1411 aa11.5□□□□□ -0.57
RAD18-201ENST00000264926 ANP32BQ92688 251 aaKnown RBP11.49□□□□□ -0.57
RAD18-201ENST00000264926 SCAF1Q9H7N4 1312 aaKnown RBP11.45□□□□□ -0.58
RAD18-201ENST00000264926 FKBP8Q14318 412 aa11.45□□□□□ -0.58
RAD18-201ENST00000264926 CANXP27824 592 aaKnown RBP11.43□□□□□ -0.58
RAD18-201ENST00000264926 TONSLQ96HA7 1378 aa11.43□□□□□ -0.58
RAD18-201ENST00000264926 UPF2Q9HAU5 1272 aaKnown RBP11.42□□□□□ -0.58
RAD18-201ENST00000264926 DDRGK1Q96HY6 314 aa11.41□□□□□ -0.58
RAD18-201ENST00000264926 ANP32EQ9BTT0 268 aa11.4□□□□□ -0.59
RAD18-201ENST00000264926 GOLGA6L2Q8N9W4 650 aaPredicted RBP11.38□□□□□ -0.59
RAD18-201ENST00000264926 NEFMP07197 916 aa11.37□□□□□ -0.59
RAD18-201ENST00000264926 SLC4A1APQ9BWU0 796 aaKnown RBP11.36□□□□□ -0.59
RAD18-201ENST00000264926 GOLGA3Q08378 1498 aa11.35□□□□□ -0.59
RAD18-201ENST00000264926 SCRIBQ14160 1630 aa11.35□□□□□ -0.59
RAD18-201ENST00000264926 EIF5BO60841 1220 aaKnown RBP11.33□□□□□ -0.6
RAD18-201ENST00000264926 CNGB1Q14028 1251 aaPredicted RBP11.31□□□□□ -0.6
RAD18-201ENST00000264926 HNRNPUQ00839 825 aaKnown RBP eCLIP11.3□□□□□ -0.6
RAD18-201ENST00000264926 CCDC136Q96JN2 1154 aa11.29□□□□□ -0.6
RAD18-201ENST00000264926 NPM2Q86SE8 214 aaKnown RBP11.28□□□□□ -0.6
RAD18-201ENST00000264926 ABCC9O60706 1549 aa11.26□□□□□ -0.61
RAD18-201ENST00000264926 PPM1GO15355 546 aaPredicted RBP11.26□□□□□ -0.61
RAD18-201ENST00000264926 BECN1Q14457 450 aa11.25□□□□□ -0.61
RAD18-201ENST00000264926 MYO15BQ96JP2 1530 aa11.25□□□□□ -0.61
RAD18-201ENST00000264926 RB1CC1Q8TDY2 1594 aa11.25□□□□□ -0.61
RAD18-201ENST00000264926 CLIP1P30622 1438 aa11.25□□□□□ -0.61
RAD18-201ENST00000264926 TNIKQ9UKE5 1360 aa11.25□□□□□ -0.61
RAD18-201ENST00000264926 ZNF326Q5BKZ1 582 aaKnown RBP11.24□□□□□ -0.61
RAD18-201ENST00000264926 MIER1Q8N108 512 aa11.23□□□□□ -0.61
RAD18-201ENST00000264926 CEP162Q5TB80 1403 aa11.23□□□□□ -0.61
RAD18-201ENST00000264926 RSF1Q96T23 1441 aaPredicted RBP11.23□□□□□ -0.61
RAD18-201ENST00000264926 CEP164Q9UPV0 1460 aa11.22□□□□□ -0.61
RAD18-201ENST00000264926 HSP90AA1P07900 732 aaKnown RBP11.22□□□□□ -0.61
RAD18-201ENST00000264926 DDX10Q13206 875 aaKnown RBP11.21□□□□□ -0.61
RAD18-201ENST00000264926 ERICH6BQ5W0A0 696 aa11.21□□□□□ -0.62
RAD18-201ENST00000264926 TIMELESSQ9UNS1 1208 aa11.19□□□□□ -0.62
RAD18-201ENST00000264926 TMC1Q8TDI8 760 aa11.18□□□□□ -0.62
RAD18-201ENST00000264926 PPP4R2Q9NY27 417 aa11.16□□□□□ -0.62
RAD18-201ENST00000264926 FAM9BQ8IZU0 186 aa11.16□□□□□ -0.62
RAD18-201ENST00000264926 EIF4G2P78344 907 aaKnown RBP eCLIP11.15□□□□□ -0.62
RAD18-201ENST00000264926 NBR1Q14596 966 aa11.15□□□□□ -0.62
RAD18-201ENST00000264926 MRS2Q9HD23 443 aa11.15□□□□□ -0.62
RAD18-201ENST00000264926 NACADO15069 1562 aa11.15□□□□□ -0.62
RAD18-201ENST00000264926 WDR43Q15061 677 aaKnown RBP eCLIP11.15□□□□□ -0.62
RAD18-201ENST00000264926 TNNT2P45379 298 aaPredicted RBP11.14□□□□□ -0.63
RAD18-201ENST00000264926 GOLGA6L22H0YM25 854 aa11.13□□□□□ -0.63
RAD18-201ENST00000264926 CCER2I3L3R5 266 aa11.13□□□□□ -0.63
RAD18-201ENST00000264926 TRIM44Q96DX7 344 aaPredicted RBP11.12□□□□□ -0.63
RAD18-201ENST00000264926 NOP58Q9Y2X3 529 aaKnown RBP11.11□□□□□ -0.63
RAD18-201ENST00000264926 SUPT16HQ9Y5B9 1047 aaKnown RBP11.09□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 74.6 ms