RNA–Protein interactions for RNA: ENST00000390917.1

RNU6-604P-201, Transcript of RNA, U6 small nuclear 604, pseudogene, humanhuman

BASIC

Gene RNU6-604P, Length 100 nt, Biotype snRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNU6-604P-201ENST00000390917 AEBP2Q6ZN18 517 aaPredicted RBP8.39□□□□□ -1.07
RNU6-604P-201ENST00000390917 CHIC1Q5VXU3 224 aa7.93□□□□□ -1.14
RNU6-604P-201ENST00000390917 POTEDQ86YR6 584 aa7.65□□□□□ -1.18
RNU6-604P-201ENST00000390917 SENP3Q9H4L4 574 aaPredicted RBP7.36□□□□□ -1.23
RNU6-604P-201ENST00000390917 PHF23Q9BUL5 403 aaPredicted RBP7.09□□□□□ -1.27
RNU6-604P-201ENST00000390917 FOXD1Q16676 465 aa6.86□□□□□ -1.31
RNU6-604P-201ENST00000390917 MSH5O43196 834 aa6.77□□□□□ -1.33
RNU6-604P-201ENST00000390917 PIAS4Q8N2W9 510 aaPredicted RBP6.29□□□□□ -1.4
RNU6-604P-201ENST00000390917 CACNB1Q02641 598 aaPredicted RBP6.16□□□□□ -1.42
RNU6-604P-201ENST00000390917 POTEHQ6S545 545 aa5.88□□□□□ -1.47
RNU6-604P-201ENST00000390917 PPP6R1Q9UPN7 881 aa5.85□□□□□ -1.47
RNU6-604P-201ENST00000390917 ADRA2BP18089 450 aa5.8□□□□□ -1.48
RNU6-604P-201ENST00000390917 DMRT2Q9Y5R5 561 aa5.71□□□□□ -1.5
RNU6-604P-201ENST00000390917 RNF39Q9H2S5 420 aa5.68□□□□□ -1.5
RNU6-604P-201ENST00000390917 PLPPR3Q6T4P5 718 aa5.63□□□□□ -1.51
RNU6-604P-201ENST00000390917 C1QBPQ07021 282 aaKnown RBP5.58□□□□□ -1.52
RNU6-604P-201ENST00000390917 MAPK8IP2Q13387 824 aaPredicted RBP5.5□□□□□ -1.53
RNU6-604P-201ENST00000390917 DCAF8L1A6NGE4 600 aa5.48□□□□□ -1.53
RNU6-604P-201ENST00000390917 SCAF1Q9H7N4 1312 aaKnown RBP5.43□□□□□ -1.54
RNU6-604P-201ENST00000390917 DNAJC5BQ9UF47 199 aa5.25□□□□□ -1.57
RNU6-604P-201ENST00000390917 HOXD11P31277 338 aaPredicted RBP5.24□□□□□ -1.57
RNU6-604P-201ENST00000390917 SP7Q8TDD2 431 aaPredicted RBP5.22□□□□□ -1.57
RNU6-604P-201ENST00000390917 PLSCR2Q9NRY7 297 aa5.11□□□□□ -1.59
RNU6-604P-201ENST00000390917 DSG3P32926 999 aa5.06□□□□□ -1.6
RNU6-604P-201ENST00000390917 CHRDL2Q6WN34 429 aa5.04□□□□□ -1.6
RNU6-604P-201ENST00000390917 RNF216Q9NWF9 866 aaPredicted RBP5.03□□□□□ -1.6
RNU6-604P-201ENST00000390917 GRWD1Q9BQ67 446 aaKnown RBP eCLIP4.98□□□□□ -1.61
RNU6-604P-201ENST00000390917 CAPN15O75808 1086 aa4.94□□□□□ -1.62
RNU6-604P-201ENST00000390917 RBM42Q9BTD8 480 aaKnown RBP4.94□□□□□ -1.62
RNU6-604P-201ENST00000390917 CNKSR2Q8WXI2 1034 aa4.9□□□□□ -1.63
RNU6-604P-201ENST00000390917 SPINK5Q9NQ38 1064 aaPredicted RBP4.88□□□□□ -1.63
RNU6-604P-201ENST00000390917 LHX8Q68G74 356 aa4.86□□□□□ -1.63
RNU6-604P-201ENST00000390917 HAX1O00165 279 aa4.83□□□□□ -1.64
RNU6-604P-201ENST00000390917 PPP4R3CPQ6ZMV5 832 aa4.8□□□□□ -1.64
RNU6-604P-201ENST00000390917 U3KPZ7 1027 aaPredicted RBP4.79□□□□□ -1.64
RNU6-604P-201ENST00000390917 ABCB7O75027 752 aa4.75□□□□□ -1.65
RNU6-604P-201ENST00000390917 PIP4P2Q8N4L2 257 aa4.75□□□□□ -1.65
RNU6-604P-201ENST00000390917 ZNF219Q9P2Y4 722 aaPredicted RBP4.74□□□□□ -1.65
RNU6-604P-201ENST00000390917 APLP2Q06481 763 aa4.7□□□□□ -1.66
RNU6-604P-201ENST00000390917 TRHP20396 242 aaPredicted RBP4.69□□□□□ -1.66
RNU6-604P-201ENST00000390917 EVX2Q03828 476 aa4.65□□□□□ -1.67
RNU6-604P-201ENST00000390917 AKT1S1Q96B36 256 aa4.64□□□□□ -1.67
RNU6-604P-201ENST00000390917 PCDH10Q9P2E7 1040 aa4.64□□□□□ -1.67
RNU6-604P-201ENST00000390917 POTEMA6NI47 508 aa4.63□□□□□ -1.67
RNU6-604P-201ENST00000390917 FXR2P51116 673 aaKnown RBP eCLIP4.62□□□□□ -1.67
RNU6-604P-201ENST00000390917 POTEGQ6S5H5 508 aa4.58□□□□□ -1.68
RNU6-604P-201ENST00000390917 GABBR2O75899 941 aa4.57□□□□□ -1.68
RNU6-604P-201ENST00000390917 REM2Q8IYK8 340 aaPredicted RBP4.56□□□□□ -1.68
RNU6-604P-201ENST00000390917 PITPNM1O00562 1244 aa4.53□□□□□ -1.68
RNU6-604P-201ENST00000390917 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP4.51□□□□□ -1.69
RNU6-604P-201ENST00000390917 HNRNPUL2Q1KMD3 747 aaKnown RBP4.51□□□□□ -1.69
RNU6-604P-201ENST00000390917 C19orf67A6NJJ6 358 aa4.5□□□□□ -1.69
RNU6-604P-201ENST00000390917 NCBP3Q53F19 620 aaKnown RBP4.48□□□□□ -1.69
RNU6-604P-201ENST00000390917 POTEIP0CG38 1075 aa4.44□□□□□ -1.7
RNU6-604P-201ENST00000390917 SAMD1Q6SPF0 538 aaPredicted RBP4.44□□□□□ -1.7
RNU6-604P-201ENST00000390917 OTUD5Q96G74 571 aa4.42□□□□□ -1.7
RNU6-604P-201ENST00000390917 PRKAR2AP13861 404 aaKnown RBP4.4□□□□□ -1.71
RNU6-604P-201ENST00000390917 POLA2Q14181 598 aa4.4□□□□□ -1.71
RNU6-604P-201ENST00000390917 ZBTB12Q9Y330 459 aaPredicted RBP4.39□□□□□ -1.71
RNU6-604P-201ENST00000390917 CLCN6P51797 869 aa4.38□□□□□ -1.71
RNU6-604P-201ENST00000390917 NPM3O75607 178 aaKnown RBP4.35□□□□□ -1.71
RNU6-604P-201ENST00000390917 DCBLD2Q96PD2 775 aa4.35□□□□□ -1.71
RNU6-604P-201ENST00000390917 OSCARQ8IYS5 282 aa4.33□□□□□ -1.72
RNU6-604P-201ENST00000390917 SLC4A2P04920 1241 aa4.3□□□□□ -1.72
RNU6-604P-201ENST00000390917 LCE2DQ5TA82 110 aaPredicted RBP4.3□□□□□ -1.72
RNU6-604P-201ENST00000390917 POTEB2H3BUK9 544 aa4.26□□□□□ -1.73
RNU6-604P-201ENST00000390917 CDAN1Q8IWY9 1227 aa4.25□□□□□ -1.73
RNU6-604P-201ENST00000390917 CD44P16070 742 aaKnown RBP4.24□□□□□ -1.73
RNU6-604P-201ENST00000390917 SPDYE1Q8NFV5 336 aaPredicted RBP4.24□□□□□ -1.73
RNU6-604P-201ENST00000390917 MMRN1Q13201 1228 aa4.23□□□□□ -1.73
RNU6-604P-201ENST00000390917 MAMSTRQ6ZN01 415 aa4.22□□□□□ -1.73
RNU6-604P-201ENST00000390917 FAM163AQ96GL9 167 aaPredicted RBP4.21□□□□□ -1.74
RNU6-604P-201ENST00000390917 CLEC11AQ9Y240 323 aa4.2□□□□□ -1.74
RNU6-604P-201ENST00000390917 ZNF579Q8NAF0 562 aaKnown RBP4.17□□□□□ -1.74
RNU6-604P-201ENST00000390917 CHADLQ6NUI6 762 aa4.16□□□□□ -1.74
RNU6-604P-201ENST00000390917 SPNS2Q8IVW8 549 aa4.16□□□□□ -1.74
RNU6-604P-201ENST00000390917 SPDYE2BA6NHP3 402 aa4.15□□□□□ -1.75
RNU6-604P-201ENST00000390917 SPDYE6P0CI01 402 aa4.15□□□□□ -1.75
RNU6-604P-201ENST00000390917 SPDYE2Q495Y8 402 aa4.15□□□□□ -1.75
RNU6-604P-201ENST00000390917 SCUBE2Q9NQ36 999 aa4.15□□□□□ -1.75
RNU6-604P-201ENST00000390917 METRNQ9UJH8 293 aa4.11□□□□□ -1.75
RNU6-604P-201ENST00000390917 GALR2O43603 387 aaPredicted RBP4.1□□□□□ -1.75
RNU6-604P-201ENST00000390917 MYCNP04198 464 aaPredicted RBP4.1□□□□□ -1.75
RNU6-604P-201ENST00000390917 POTEJP0CG39 1038 aa4.1□□□□□ -1.75
RNU6-604P-201ENST00000390917 SLC39A7Q92504 469 aa4.08□□□□□ -1.76
RNU6-604P-201ENST00000390917 FARP1Q9Y4F1 1045 aaPredicted RBP4.08□□□□□ -1.76
RNU6-604P-201ENST00000390917 C7P10643 843 aa4.07□□□□□ -1.76
RNU6-604P-201ENST00000390917 PRR29P0C7W0 189 aa4.05□□□□□ -1.76
RNU6-604P-201ENST00000390917 PELP1Q8IZL8 1130 aaKnown RBP4.05□□□□□ -1.76
RNU6-604P-201ENST00000390917 ZRANB1Q9UGI0 708 aa4.05□□□□□ -1.76
RNU6-604P-201ENST00000390917 ASTLQ6HA08 431 aaPredicted RBP4.02□□□□□ -1.77
RNU6-604P-201ENST00000390917 SSUH2Q9Y2M2 353 aa4.01□□□□□ -1.77
RNU6-604P-201ENST00000390917 ST18O60284 1047 aa3.99□□□□□ -1.77
RNU6-604P-201ENST00000390917 TMEM121BQ9BXQ6 578 aaPredicted RBP3.98□□□□□ -1.77
RNU6-604P-201ENST00000390917 ATMINO43313 823 aaPredicted RBP3.96□□□□□ -1.78
RNU6-604P-201ENST00000390917 PAK3O75914 559 aaPredicted RBP3.95□□□□□ -1.78
RNU6-604P-201ENST00000390917 FBLN2P98095 1184 aa3.95□□□□□ -1.78
RNU6-604P-201ENST00000390917 ATF5Q9Y2D1 282 aaPredicted RBP3.95□□□□□ -1.78
RNU6-604P-201ENST00000390917 ZNF692Q9BU19 519 aaPredicted RBP3.94□□□□□ -1.78
RNU6-604P-201ENST00000390917 PHF12Q96QT6 1004 aa3.93□□□□□ -1.78
Retrieved 100 of 20,778 RNA–protein pairs in 20.2 ms