RNA–Protein interactions for RNA: ENST00000395981.7

BDNF-205, Transcript of brain derived neurotrophic factor, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene BDNF, Length 4,071 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BDNF-205ENST00000395981 NISCHQ9Y2I1 1504 aa12.57□□□□□ -0.4
BDNF-205ENST00000395981 SLC24A1O60721 1099 aa11.49□□□□□ -0.57
BDNF-205ENST00000395981 CCDC180Q9P1Z9 1646 aa11.15□□□□□ -0.62
BDNF-205ENST00000395981 EHMT2Q96KQ7 1210 aa10.95□□□□□ -0.66
BDNF-205ENST00000395981 ABCC9O60706 1549 aa10.77□□□□□ -0.69
BDNF-205ENST00000395981 MYT1Q01538 1121 aa10.76□□□□□ -0.69
BDNF-205ENST00000395981 DCAF8L2P0C7V8 631 aa10.74□□□□□ -0.69
BDNF-205ENST00000395981 PELP1Q8IZL8 1130 aaKnown RBP10.54□□□□□ -0.72
BDNF-205ENST00000395981 ZCCHC6Q5VYS8 1495 aaKnown RBP10.5□□□□□ -0.73
BDNF-205ENST00000395981 ERICH6Q7L0X2 663 aa10.48□□□□□ -0.73
BDNF-205ENST00000395981 MYO15BQ96JP2 1530 aa10.45□□□□□ -0.74
BDNF-205ENST00000395981 DCAF1Q9Y4B6 1507 aa10.43□□□□□ -0.74
BDNF-205ENST00000395981 UNC13AQ9UPW8 1703 aa10.43□□□□□ -0.74
BDNF-205ENST00000395981 TTBK1Q5TCY1 1321 aaPredicted RBP10.42□□□□□ -0.74
BDNF-205ENST00000395981 NACADO15069 1562 aa10.41□□□□□ -0.74
BDNF-205ENST00000395981 DAXXQ9UER7 740 aaPredicted RBP10.4□□□□□ -0.74
BDNF-205ENST00000395981 RB1CC1Q8TDY2 1594 aa10.37□□□□□ -0.75
BDNF-205ENST00000395981 PLPPR3Q6T4P5 718 aa10.34□□□□□ -0.75
BDNF-205ENST00000395981 BICRAQ9NZM4 1560 aa10.3□□□□□ -0.76
BDNF-205ENST00000395981 SUPT5HO00267 1087 aaKnown RBP10.28□□□□□ -0.76
BDNF-205ENST00000395981 RTN4Q9NQC3 1192 aaKnown RBP10.27□□□□□ -0.77
BDNF-205ENST00000395981 PRKCSHP14314 528 aaPredicted RBP10.2□□□□□ -0.78
BDNF-205ENST00000395981 RANGAP1P46060 587 aaPredicted RBP10.19□□□□□ -0.78
BDNF-205ENST00000395981 PCGF6Q9BYE7 350 aa10.15□□□□□ -0.78
BDNF-205ENST00000395981 SHROOM4Q9ULL8 1493 aa10.15□□□□□ -0.78
BDNF-205ENST00000395981 SCRIBQ14160 1630 aa10.13□□□□□ -0.79
BDNF-205ENST00000395981 CHIC1Q5VXU3 224 aa10.09□□□□□ -0.79
BDNF-205ENST00000395981 HRCP23327 699 aa10.06□□□□□ -0.8
BDNF-205ENST00000395981 PABPN1Q86U42 306 aaKnown RBP eCLIP10.04□□□□□ -0.8
BDNF-205ENST00000395981 DNAJC5BQ9UF47 199 aa10.04□□□□□ -0.8
BDNF-205ENST00000395981 NCBP3Q53F19 620 aaKnown RBP10.03□□□□□ -0.8
BDNF-205ENST00000395981 PPARGC1BQ86YN6 1023 aaKnown RBP9.98□□□□□ -0.81
BDNF-205ENST00000395981 EIF5BO60841 1220 aaKnown RBP9.95□□□□□ -0.82
BDNF-205ENST00000395981 AMER1Q5JTC6 1135 aaPredicted RBP9.9□□□□□ -0.83
BDNF-205ENST00000395981 APLP2Q06481 763 aa9.89□□□□□ -0.83
BDNF-205ENST00000395981 EIF4G1Q04637 1599 aaKnown RBP9.89□□□□□ -0.83
BDNF-205ENST00000395981 TULP1O00294 542 aaPredicted RBP9.85□□□□□ -0.83
BDNF-205ENST00000395981 CC2D2AQ9P2K1 1620 aa9.84□□□□□ -0.83
BDNF-205ENST00000395981 CECR2Q9BXF3 1484 aa9.84□□□□□ -0.83
BDNF-205ENST00000395981 TIMELESSQ9UNS1 1208 aa9.76□□□□□ -0.85
BDNF-205ENST00000395981 SMARCA4P51532 1647 aa9.75□□□□□ -0.85
BDNF-205ENST00000395981 PEG3Q9GZU2 1588 aa9.73□□□□□ -0.85
BDNF-205ENST00000395981 PODXL2Q9NZ53 605 aa9.73□□□□□ -0.85
BDNF-205ENST00000395981 MROH2BQ7Z745 1585 aa9.73□□□□□ -0.85
BDNF-205ENST00000395981 KCNA4P22459 653 aa9.71□□□□□ -0.86
BDNF-205ENST00000395981 ARXQ96QS3 562 aa9.7□□□□□ -0.86
BDNF-205ENST00000395981 ATAD2BQ9ULI0 1458 aa9.67□□□□□ -0.86
BDNF-205ENST00000395981 BAZ1AQ9NRL2 1556 aaPredicted RBP9.66□□□□□ -0.86
BDNF-205ENST00000395981 NCAPD3P42695 1498 aa9.65□□□□□ -0.86
BDNF-205ENST00000395981 LOC105371045A0A1W2PR82 267 aa9.65□□□□□ -0.86
BDNF-205ENST00000395981 ZEB1P37275 1124 aaPredicted RBP9.65□□□□□ -0.86
BDNF-205ENST00000395981 HOMEZQ8IX15 550 aa9.65□□□□□ -0.86
BDNF-205ENST00000395981 TPRNQ4KMQ1 711 aa9.64□□□□□ -0.87
BDNF-205ENST00000395981 WIZO95785 1651 aa9.64□□□□□ -0.87
BDNF-205ENST00000395981 TRIM26Q12899 539 aaPredicted RBP9.63□□□□□ -0.87
BDNF-205ENST00000395981 FAM9AQ8IZU1 332 aaPredicted RBP9.61□□□□□ -0.87
BDNF-205ENST00000395981 HMGXB3Q12766 1538 aa9.6□□□□□ -0.87
BDNF-205ENST00000395981 RSF1Q96T23 1441 aaPredicted RBP9.6□□□□□ -0.87
BDNF-205ENST00000395981 KLHL34Q8N239 644 aa9.59□□□□□ -0.87
BDNF-205ENST00000395981 CENPBP07199 599 aaPredicted RBP9.59□□□□□ -0.87
BDNF-205ENST00000395981 SMARCA2P51531 1590 aa9.56□□□□□ -0.88
BDNF-205ENST00000395981 TAOK2Q9UL54 1235 aa9.53□□□□□ -0.88
BDNF-205ENST00000395981 CSRNP3Q8WYN3 585 aa9.53□□□□□ -0.88
BDNF-205ENST00000395981 CCER1Q8TC90 406 aaPredicted RBP9.51□□□□□ -0.89
BDNF-205ENST00000395981 SCAF1Q9H7N4 1312 aaKnown RBP9.51□□□□□ -0.89
BDNF-205ENST00000395981 HAP1P54257 671 aaPredicted RBP9.5□□□□□ -0.89
BDNF-205ENST00000395981 YTHDC1Q96MU7 727 aaKnown RBP9.5□□□□□ -0.89
BDNF-205ENST00000395981 C14orf37Q86TY3 774 aa9.5□□□□□ -0.89
BDNF-205ENST00000395981 BCANQ96GW7 911 aa9.48□□□□□ -0.89
BDNF-205ENST00000395981 PLEKHG5O94827 1062 aa9.47□□□□□ -0.89
BDNF-205ENST00000395981 BAZ1BQ9UIG0 1483 aaKnown RBP9.47□□□□□ -0.89
BDNF-205ENST00000395981 TOP2AP11388 1531 aaKnown RBP9.45□□□□□ -0.9
BDNF-205ENST00000395981 GTF3C3Q9Y5Q9 886 aa9.45□□□□□ -0.9
BDNF-205ENST00000395981 NESP48681 1621 aa9.44□□□□□ -0.9
BDNF-205ENST00000395981 NPM2Q86SE8 214 aaKnown RBP9.43□□□□□ -0.9
BDNF-205ENST00000395981 BCL11AQ9H165 835 aa9.42□□□□□ -0.9
BDNF-205ENST00000395981 TRIM41Q8WV44 630 aa9.41□□□□□ -0.9
BDNF-205ENST00000395981 ACIN1Q9UKV3 1341 aaKnown RBP9.38□□□□□ -0.91
BDNF-205ENST00000395981 CCDC88BA6NC98 1476 aa9.37□□□□□ -0.91
BDNF-205ENST00000395981 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP9.37□□□□□ -0.91
BDNF-205ENST00000395981 KIF21AQ7Z4S6 1674 aa9.36□□□□□ -0.91
BDNF-205ENST00000395981 DIEXFQ68CQ4 756 aaKnown RBP9.35□□□□□ -0.91
BDNF-205ENST00000395981 LAMC3Q9Y6N6 1575 aa9.35□□□□□ -0.91
BDNF-205ENST00000395981 NEUROD1Q13562 356 aa9.34□□□□□ -0.91
BDNF-205ENST00000395981 THOC2Q8NI27 1593 aaKnown RBP9.34□□□□□ -0.91
BDNF-205ENST00000395981 CFTRP13569 1480 aa9.33□□□□□ -0.92
BDNF-205ENST00000395981 PRDM2Q13029 1718 aa9.33□□□□□ -0.92
BDNF-205ENST00000395981 AEBP2Q6ZN18 517 aaPredicted RBP9.3□□□□□ -0.92
BDNF-205ENST00000395981 CADPSQ9ULU8 1353 aa9.3□□□□□ -0.92
BDNF-205ENST00000395981 POLR3GLQ9BT43 218 aa9.25□□□□□ -0.93
BDNF-205ENST00000395981 SLC4A1APQ9BWU0 796 aaKnown RBP9.24□□□□□ -0.93
BDNF-205ENST00000395981 WDR62O43379 1518 aa9.21□□□□□ -0.93
BDNF-205ENST00000395981 URB2Q14146 1524 aaKnown RBP9.21□□□□□ -0.94
BDNF-205ENST00000395981 UBTFP17480 764 aaKnown RBP9.2□□□□□ -0.94
BDNF-205ENST00000395981 FANCD2Q9BXW9 1451 aa9.19□□□□□ -0.94
BDNF-205ENST00000395981 PDS5BQ9NTI5 1447 aa9.16□□□□□ -0.94
BDNF-205ENST00000395981 CUX2O14529 1486 aa9.15□□□□□ -0.94
BDNF-205ENST00000395981 MRC2Q9UBG0 1479 aa9.13□□□□□ -0.95
BDNF-205ENST00000395981 PLCB2Q00722 1185 aa9.12□□□□□ -0.95
BDNF-205ENST00000395981 ERCC6Q03468 1493 aa9.12□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 72 ms