Protein–RNA interactions for Protein: Q9BYR6

KRTAP3-3, Keratin-associated protein 3-3, humanhuman

Predictions only

Length 98 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRTAP3-3Q9BYR6 AC079416.2-201ENST00000625035 1193 ntBASIC21.94■■□□□ 1.1
KRTAP3-3Q9BYR6 ATP5C1-201ENST00000335698 1078 ntAPPRIS P3 TSL 1 (best) BASIC20.63■□□□□ 0.89
KRTAP3-3Q9BYR6 PLGRKT-201ENST00000223864 932 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
KRTAP3-3Q9BYR6 DCD-201ENST00000293371 645 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
KRTAP3-3Q9BYR6 KDM2B-217ENST00000543852 1188 ntTSL 5 BASIC20.31■□□□□ 0.84
KRTAP3-3Q9BYR6 AP001002.2-201ENST00000625137 386 ntBASIC20.2■□□□□ 0.82
KRTAP3-3Q9BYR6 Metazoa_SRP.96-201ENST00000621315 318 ntBASIC20.19■□□□□ 0.82
KRTAP3-3Q9BYR6 KRTAP5-2-201ENST00000412090 1118 ntAPPRIS P1 BASIC19.84■□□□□ 0.77
KRTAP3-3Q9BYR6 CARMIL1-202ENST00000461945 1290 ntTSL 1 (best) BASIC19.78■□□□□ 0.76
KRTAP3-3Q9BYR6 AL122058.1-201ENST00000412321 1166 ntTSL 1 (best) BASIC19.77■□□□□ 0.76
KRTAP3-3Q9BYR6 Z99916.3-201ENST00000623422 1080 ntBASIC19.69■□□□□ 0.74
KRTAP3-3Q9BYR6 AC092473.1-201ENST00000441098 221 ntBASIC19.63■□□□□ 0.73
KRTAP3-3Q9BYR6 NIFKP4-201ENST00000567275 1192 ntBASIC19.61■□□□□ 0.73
KRTAP3-3Q9BYR6 TCEAL3-202ENST00000372627 1113 ntAPPRIS P1 TSL 1 (best) BASIC19.58■□□□□ 0.72
KRTAP3-3Q9BYR6 TCEAL3-203ENST00000372628 1221 ntAPPRIS P1 TSL 5 BASIC19.58■□□□□ 0.72
KRTAP3-3Q9BYR6 Metazoa_SRP.67-201ENST00000617099 296 ntBASIC19.54■□□□□ 0.72
KRTAP3-3Q9BYR6 SATB1-AS1-227ENST00000625533 743 ntTSL 5 BASIC19.54■□□□□ 0.72
KRTAP3-3Q9BYR6 LST1-202ENST00000303757 604 ntTSL 1 (best) BASIC19.47■□□□□ 0.71
KRTAP3-3Q9BYR6 IFNA4-201ENST00000421715 978 ntAPPRIS P1 BASIC19.44■□□□□ 0.7
KRTAP3-3Q9BYR6 AC009446.1-201ENST00000519840 808 ntTSL 2 BASIC19.44■□□□□ 0.7
KRTAP3-3Q9BYR6 AL035078.1-201ENST00000531962 820 ntTSL 5 BASIC19.3■□□□□ 0.68
KRTAP3-3Q9BYR6 BNIP3P41-202ENST00000616656 861 ntBASIC19.26■□□□□ 0.67
KRTAP3-3Q9BYR6 AC109587.1-201ENST00000482368 962 ntTSL 3 BASIC19.22■□□□□ 0.67
KRTAP3-3Q9BYR6 RGS1-203ENST00000469578 1034 ntTSL 2 BASIC19.15■□□□□ 0.66
KRTAP3-3Q9BYR6 AC008686.1-203ENST00000591826 463 ntTSL 2 BASIC19.13■□□□□ 0.65
KRTAP3-3Q9BYR6 AC012183.1-201ENST00000625197 499 ntBASIC19.09■□□□□ 0.65
KRTAP3-3Q9BYR6 LINC02536-201ENST00000625799 625 ntTSL 3 BASIC19.08■□□□□ 0.64
KRTAP3-3Q9BYR6 STK33P1-201ENST00000423835 1218 ntBASIC19.04■□□□□ 0.64
KRTAP3-3Q9BYR6 UBE2Q2P6-202ENST00000617217 443 ntTSL 5 BASIC19.03■□□□□ 0.64
KRTAP3-3Q9BYR6 AC098799.1-201ENST00000504752 800 ntBASIC19.02■□□□□ 0.64
KRTAP3-3Q9BYR6 AC006213.4-201ENST00000616184 634 ntBASIC19.02■□□□□ 0.64
KRTAP3-3Q9BYR6 HAPLN1-206ENST00000514416 1145 ntTSL 5 BASIC19.01■□□□□ 0.63
KRTAP3-3Q9BYR6 AL355338.1-201ENST00000612598 913 ntTSL 2 BASIC18.99■□□□□ 0.63
KRTAP3-3Q9BYR6 CAMTA1-205ENST00000467404 546 ntTSL 3 BASIC18.97■□□□□ 0.63
KRTAP3-3Q9BYR6 KRTAP4-4-201ENST00000390661 1081 ntAPPRIS P1 BASIC18.96■□□□□ 0.63
KRTAP3-3Q9BYR6 AC120057.1-201ENST00000483947 663 ntBASIC18.96■□□□□ 0.63
KRTAP3-3Q9BYR6 AKR1B10P2-201ENST00000577332 927 ntBASIC18.94■□□□□ 0.62
KRTAP3-3Q9BYR6 AC012368.2-201ENST00000423539 560 ntTSL 3 BASIC18.93■□□□□ 0.62
KRTAP3-3Q9BYR6 AL390728.6-201ENST00000566446 1246 ntBASIC18.89■□□□□ 0.61
KRTAP3-3Q9BYR6 RN7SL602P-201ENST00000578326 324 ntBASIC18.89■□□□□ 0.61
KRTAP3-3Q9BYR6 AC244517.3-201ENST00000616254 1235 ntBASIC18.88■□□□□ 0.61
KRTAP3-3Q9BYR6 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC18.87■□□□□ 0.61
KRTAP3-3Q9BYR6 LST1-204ENST00000376086 554 ntTSL 1 (best) BASIC18.87■□□□□ 0.61
KRTAP3-3Q9BYR6 AC107419.1-202ENST00000608735 1081 ntTSL 3 BASIC18.87■□□□□ 0.61
KRTAP3-3Q9BYR6 AL158825.2-201ENST00000455336 670 ntTSL 5 BASIC18.86■□□□□ 0.61
KRTAP3-3Q9BYR6 AC093831.1-201ENST00000509166 434 ntTSL 3 BASIC18.85■□□□□ 0.61
KRTAP3-3Q9BYR6 HLA-F-217ENST00000334668 1283 ntAPPRIS ALT2 BASIC18.8■□□□□ 0.6
KRTAP3-3Q9BYR6 IL12A-202ENST00000466512 1283 ntTSL 3 BASIC18.78■□□□□ 0.6
KRTAP3-3Q9BYR6 AC092068.1-201ENST00000592525 454 ntTSL 2 BASIC18.77■□□□□ 0.6
KRTAP3-3Q9BYR6 LINC00437-201ENST00000414161 791 ntTSL 1 (best) BASIC18.76■□□□□ 0.59
KRTAP3-3Q9BYR6 RN7SL275P-201ENST00000582762 335 ntBASIC18.75■□□□□ 0.59
KRTAP3-3Q9BYR6 MTATP6P19-201ENST00000413797 659 ntBASIC18.73■□□□□ 0.59
KRTAP3-3Q9BYR6 TMEM41B-205ENST00000533723 723 ntTSL 2 BASIC18.73■□□□□ 0.59
KRTAP3-3Q9BYR6 AL589935.2-201ENST00000616471 1231 ntBASIC18.69■□□□□ 0.58
KRTAP3-3Q9BYR6 TMEM14EP-202ENST00000639378 1296 ntBASIC18.69■□□□□ 0.58
KRTAP3-3Q9BYR6 AC019209.2-201ENST00000545704 373 ntTSL 3 BASIC18.67■□□□□ 0.58
KRTAP3-3Q9BYR6 ATP6V1G1-201ENST00000374050 1080 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
KRTAP3-3Q9BYR6 MTND4LP12-201ENST00000448237 295 ntBASIC18.65■□□□□ 0.58
KRTAP3-3Q9BYR6 CAMTA1-208ENST00000473578 567 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
KRTAP3-3Q9BYR6 MTND2P7-201ENST00000521337 640 ntBASIC18.6■□□□□ 0.57
KRTAP3-3Q9BYR6 AL161757.2-201ENST00000553800 421 ntTSL 3 BASIC18.58■□□□□ 0.56
KRTAP3-3Q9BYR6 AC013391.2-201ENST00000559041 501 ntTSL 5 BASIC18.58■□□□□ 0.56
KRTAP3-3Q9BYR6 PAX6-247ENST00000638965 979 ntTSL 5 BASIC18.58■□□□□ 0.56
KRTAP3-3Q9BYR6 AC107982.2-201ENST00000577360 463 ntTSL 5 BASIC18.57■□□□□ 0.56
KRTAP3-3Q9BYR6 GULP1-204ENST00000409637 1242 ntTSL 2 BASIC18.53■□□□□ 0.56
KRTAP3-3Q9BYR6 AC073575.1-201ENST00000551125 596 ntTSL 3 BASIC18.5■□□□□ 0.55
KRTAP3-3Q9BYR6 AC012497.1-201ENST00000429392 575 ntBASIC18.48■□□□□ 0.55
KRTAP3-3Q9BYR6 RN7SL718P-201ENST00000581254 303 ntBASIC18.47■□□□□ 0.55
KRTAP3-3Q9BYR6 ADCYAP1-202ENST00000450565 918 ntAPPRIS P1 TSL 1 (best) BASIC18.44■□□□□ 0.54
KRTAP3-3Q9BYR6 AC108359.1-201ENST00000616451 1211 ntBASIC18.44■□□□□ 0.54
KRTAP3-3Q9BYR6 AP003400.6-201ENST00000624698 740 ntBASIC18.44■□□□□ 0.54
KRTAP3-3Q9BYR6 AC022726.2-201ENST00000634673 547 ntBASIC18.41■□□□□ 0.54
KRTAP3-3Q9BYR6 FMC1-201ENST00000297534 1210 ntAPPRIS P1 TSL 1 (best) BASIC18.38■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-205ENST00000376089 680 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-206ENST00000376090 689 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-208ENST00000376093 648 ntAPPRIS ALT2 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-209ENST00000376096 565 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-210ENST00000376099 610 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-212ENST00000396101 459 ntTSL 1 (best) BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-214ENST00000418507 726 ntTSL 2 BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 LST1-217ENST00000438075 764 ntAPPRIS P3 TSL 1 (best) BASIC18.37■□□□□ 0.53
KRTAP3-3Q9BYR6 SELENOS-203ENST00000526049 1188 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
KRTAP3-3Q9BYR6 AC137695.1-201ENST00000604126 489 ntBASIC18.29■□□□□ 0.52
KRTAP3-3Q9BYR6 AC106744.2-201ENST00000513955 898 ntTSL 5 BASIC18.28■□□□□ 0.52
KRTAP3-3Q9BYR6 ANKRD10-IT1-201ENST00000426991 800 ntTSL 2 BASIC18.27■□□□□ 0.52
KRTAP3-3Q9BYR6 SERPINA7P1-201ENST00000443077 631 ntBASIC18.27■□□□□ 0.52
KRTAP3-3Q9BYR6 KATNBL1P2-201ENST00000433311 835 ntBASIC18.26■□□□□ 0.51
KRTAP3-3Q9BYR6 AC026790.2-201ENST00000606282 430 ntBASIC18.19■□□□□ 0.5
KRTAP3-3Q9BYR6 CFTRP2-201ENST00000634304 199 ntBASIC18.17■□□□□ 0.5
KRTAP3-3Q9BYR6 AP000240.1-201ENST00000609910 452 ntBASIC18.14■□□□□ 0.49
KRTAP3-3Q9BYR6 IFNA2-201ENST00000380206 1135 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
KRTAP3-3Q9BYR6 AC009948.4-201ENST00000604692 675 ntBASIC18.07■□□□□ 0.48
KRTAP3-3Q9BYR6 IL20-201ENST00000367096 925 ntAPPRIS P1 TSL 1 (best) BASIC18.02■□□□□ 0.48
KRTAP3-3Q9BYR6 LINC00511-205ENST00000578206 908 ntTSL 3 BASIC18.01■□□□□ 0.47
KRTAP3-3Q9BYR6 PTS-201ENST00000280362 935 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
KRTAP3-3Q9BYR6 ATP5L2-201ENST00000505920 799 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
KRTAP3-3Q9BYR6 AC027701.1-201ENST00000520155 823 ntTSL 3 BASIC17.95■□□□□ 0.46
KRTAP3-3Q9BYR6 AC017007.3-201ENST00000479865 435 ntBASIC17.93■□□□□ 0.46
KRTAP3-3Q9BYR6 AC009712.1-201ENST00000564938 316 ntBASIC17.93■□□□□ 0.46
KRTAP3-3Q9BYR6 AL365223.1-201ENST00000574864 1297 ntBASIC17.93■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 14.1 ms