RNA–Protein interactions for RNA: ENST00000331173.5

CSTF2T-201, Transcript of cleavage stimulation factor subunit 2 tau variant, humanhuman

APPRIS P1 BASIC

Gene CSTF2T, Length 4,105 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSTF2T-201ENST00000331173 NISCHQ9Y2I1 1504 aa16.52■□□□□ 0.24
CSTF2T-201ENST00000331173 DCAF8L2P0C7V8 631 aa14.49□□□□□ -0.09
CSTF2T-201ENST00000331173 CCDC180Q9P1Z9 1646 aa14.36□□□□□ -0.11
CSTF2T-201ENST00000331173 ABCC9O60706 1549 aa14.17□□□□□ -0.14
CSTF2T-201ENST00000331173 ZCCHC6Q5VYS8 1495 aaKnown RBP13.76□□□□□ -0.21
CSTF2T-201ENST00000331173 SHROOM4Q9ULL8 1493 aa13.75□□□□□ -0.21
CSTF2T-201ENST00000331173 RB1CC1Q8TDY2 1594 aa13.61□□□□□ -0.23
CSTF2T-201ENST00000331173 NACADO15069 1562 aa13.61□□□□□ -0.23
CSTF2T-201ENST00000331173 DCAF1Q9Y4B6 1507 aa13.54□□□□□ -0.24
CSTF2T-201ENST00000331173 SUPT5HO00267 1087 aaKnown RBP13.48□□□□□ -0.25
CSTF2T-201ENST00000331173 MYO15BQ96JP2 1530 aa13.46□□□□□ -0.25
CSTF2T-201ENST00000331173 PABPN1Q86U42 306 aaKnown RBP eCLIP13.45□□□□□ -0.26
CSTF2T-201ENST00000331173 SCRIBQ14160 1630 aa13.39□□□□□ -0.27
CSTF2T-201ENST00000331173 PCGF6Q9BYE7 350 aa12.94□□□□□ -0.34
CSTF2T-201ENST00000331173 BICRAQ9NZM4 1560 aa12.88□□□□□ -0.35
CSTF2T-201ENST00000331173 UNC13AQ9UPW8 1703 aa12.87□□□□□ -0.35
CSTF2T-201ENST00000331173 CECR2Q9BXF3 1484 aa12.86□□□□□ -0.35
CSTF2T-201ENST00000331173 BAZ1AQ9NRL2 1556 aaPredicted RBP12.86□□□□□ -0.35
CSTF2T-201ENST00000331173 EHMT2Q96KQ7 1210 aa12.8□□□□□ -0.36
CSTF2T-201ENST00000331173 RSF1Q96T23 1441 aaPredicted RBP12.79□□□□□ -0.36
CSTF2T-201ENST00000331173 MROH2BQ7Z745 1585 aa12.74□□□□□ -0.37
CSTF2T-201ENST00000331173 EIF4G1Q04637 1599 aaKnown RBP12.72□□□□□ -0.37
CSTF2T-201ENST00000331173 BAZ1BQ9UIG0 1483 aaKnown RBP12.72□□□□□ -0.37
CSTF2T-201ENST00000331173 SMARCA2P51531 1590 aa12.7□□□□□ -0.38
CSTF2T-201ENST00000331173 SMARCA4P51532 1647 aa12.7□□□□□ -0.38
CSTF2T-201ENST00000331173 ATAD2BQ9ULI0 1458 aa12.65□□□□□ -0.39
CSTF2T-201ENST00000331173 FAM9AQ8IZU1 332 aaPredicted RBP12.63□□□□□ -0.39
CSTF2T-201ENST00000331173 ZEB1P37275 1124 aaPredicted RBP12.62□□□□□ -0.39
CSTF2T-201ENST00000331173 HRCP23327 699 aa12.6□□□□□ -0.39
CSTF2T-201ENST00000331173 PELP1Q8IZL8 1130 aaKnown RBP12.59□□□□□ -0.39
CSTF2T-201ENST00000331173 CC2D2AQ9P2K1 1620 aa12.59□□□□□ -0.39
CSTF2T-201ENST00000331173 WIZO95785 1651 aa12.57□□□□□ -0.4
CSTF2T-201ENST00000331173 NCAPD3P42695 1498 aa12.56□□□□□ -0.4
CSTF2T-201ENST00000331173 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
CSTF2T-201ENST00000331173 TOP2AP11388 1531 aaKnown RBP12.51□□□□□ -0.41
CSTF2T-201ENST00000331173 CENPBP07199 599 aaPredicted RBP12.5□□□□□ -0.41
CSTF2T-201ENST00000331173 TRIM41Q8WV44 630 aa12.49□□□□□ -0.41
CSTF2T-201ENST00000331173 HMGXB3Q12766 1538 aa12.46□□□□□ -0.42
CSTF2T-201ENST00000331173 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
CSTF2T-201ENST00000331173 TTBK1Q5TCY1 1321 aaPredicted RBP12.43□□□□□ -0.42
CSTF2T-201ENST00000331173 CCDC88BA6NC98 1476 aa12.43□□□□□ -0.42
CSTF2T-201ENST00000331173 APLP2Q06481 763 aa12.42□□□□□ -0.42
CSTF2T-201ENST00000331173 TRIM26Q12899 539 aaPredicted RBP12.42□□□□□ -0.42
CSTF2T-201ENST00000331173 CHIC1Q5VXU3 224 aa12.41□□□□□ -0.42
CSTF2T-201ENST00000331173 PEG3Q9GZU2 1588 aa12.41□□□□□ -0.42
CSTF2T-201ENST00000331173 CADPSQ9ULU8 1353 aa12.37□□□□□ -0.43
CSTF2T-201ENST00000331173 ERCC6Q03468 1493 aa12.36□□□□□ -0.43
CSTF2T-201ENST00000331173 PDS5BQ9NTI5 1447 aa12.34□□□□□ -0.43
CSTF2T-201ENST00000331173 PPARGC1BQ86YN6 1023 aaKnown RBP12.33□□□□□ -0.44
CSTF2T-201ENST00000331173 LOC105371045A0A1W2PR82 267 aa12.31□□□□□ -0.44
CSTF2T-201ENST00000331173 MYT1Q01538 1121 aa12.28□□□□□ -0.44
CSTF2T-201ENST00000331173 CFTRP13569 1480 aa12.21□□□□□ -0.45
CSTF2T-201ENST00000331173 WRNQ14191 1432 aaPredicted RBP eCLIP12.21□□□□□ -0.45
CSTF2T-201ENST00000331173 FANCD2Q9BXW9 1451 aa12.21□□□□□ -0.45
CSTF2T-201ENST00000331173 CEP164Q9UPV0 1460 aa12.21□□□□□ -0.46
CSTF2T-201ENST00000331173 NESP48681 1621 aa12.21□□□□□ -0.46
CSTF2T-201ENST00000331173 YTHDC1Q96MU7 727 aaKnown RBP12.19□□□□□ -0.46
CSTF2T-201ENST00000331173 LAMC3Q9Y6N6 1575 aa12.17□□□□□ -0.46
CSTF2T-201ENST00000331173 UBTFP17480 764 aaKnown RBP12.16□□□□□ -0.46
CSTF2T-201ENST00000331173 RANGAP1P46060 587 aaPredicted RBP12.12□□□□□ -0.47
CSTF2T-201ENST00000331173 ABCC8Q09428 1581 aa12.1□□□□□ -0.47
CSTF2T-201ENST00000331173 FBLN2P98095 1184 aa12.08□□□□□ -0.48
CSTF2T-201ENST00000331173 MRC2Q9UBG0 1479 aa12.05□□□□□ -0.48
CSTF2T-201ENST00000331173 SOGA1O94964 1423 aa12.04□□□□□ -0.48
CSTF2T-201ENST00000331173 CSRNP3Q8WYN3 585 aa12.03□□□□□ -0.48
CSTF2T-201ENST00000331173 ERICH6Q7L0X2 663 aa12.01□□□□□ -0.49
CSTF2T-201ENST00000331173 KIF27Q86VH2 1401 aa12.01□□□□□ -0.49
CSTF2T-201ENST00000331173 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP11.99□□□□□ -0.49
CSTF2T-201ENST00000331173 CUX2O14529 1486 aa11.98□□□□□ -0.49
CSTF2T-201ENST00000331173 NEFLP07196 543 aa11.98□□□□□ -0.49
CSTF2T-201ENST00000331173 DIEXFQ68CQ4 756 aaKnown RBP11.98□□□□□ -0.49
CSTF2T-201ENST00000331173 CHMP7Q8WUX9 453 aaPredicted RBP11.97□□□□□ -0.49
CSTF2T-201ENST00000331173 TOPBP1Q92547 1522 aa11.96□□□□□ -0.49
CSTF2T-201ENST00000331173 FGD5Q6ZNL6 1462 aa11.96□□□□□ -0.49
CSTF2T-201ENST00000331173 TDRD9Q8NDG6 1382 aaKnown RBP11.96□□□□□ -0.49
CSTF2T-201ENST00000331173 EEA1Q15075 1411 aa11.95□□□□□ -0.5
CSTF2T-201ENST00000331173 DNMBPQ6XZF7 1577 aa11.94□□□□□ -0.5
CSTF2T-201ENST00000331173 CUX1P39880 1505 aa11.92□□□□□ -0.5
CSTF2T-201ENST00000331173 URB2Q14146 1524 aaKnown RBP11.91□□□□□ -0.5
CSTF2T-201ENST00000331173 RAD54L2Q9Y4B4 1467 aa11.9□□□□□ -0.5
CSTF2T-201ENST00000331173 HNRNPUL2Q1KMD3 747 aaKnown RBP11.89□□□□□ -0.51
CSTF2T-201ENST00000331173 POLA1P09884 1462 aaPredicted RBP11.89□□□□□ -0.51
CSTF2T-201ENST00000331173 IFT140Q96RY7 1462 aa11.89□□□□□ -0.51
CSTF2T-201ENST00000331173 SYNJ1O43426 1573 aa11.89□□□□□ -0.51
CSTF2T-201ENST00000331173 KIF21AQ7Z4S6 1674 aa11.88□□□□□ -0.51
CSTF2T-201ENST00000331173 TOP2BQ02880 1626 aa11.88□□□□□ -0.51
CSTF2T-201ENST00000331173 ATP1B4Q9UN42 357 aaPredicted RBP11.87□□□□□ -0.51
CSTF2T-201ENST00000331173 GTF3C3Q9Y5Q9 886 aa11.87□□□□□ -0.51
CSTF2T-201ENST00000331173 PRDM2Q13029 1718 aa11.86□□□□□ -0.51
CSTF2T-201ENST00000331173 CARMIL1Q5VZK9 1371 aa11.85□□□□□ -0.51
CSTF2T-201ENST00000331173 GAPVD1Q14C86 1478 aa11.84□□□□□ -0.51
CSTF2T-201ENST00000331173 AQRO60306 1485 aaKnown RBP eCLIP11.83□□□□□ -0.52
CSTF2T-201ENST00000331173 WDR62O43379 1518 aa11.8□□□□□ -0.52
CSTF2T-201ENST00000331173 ACIN1Q9UKV3 1341 aaKnown RBP11.79□□□□□ -0.52
CSTF2T-201ENST00000331173 GRIN2BQ13224 1484 aa11.78□□□□□ -0.52
CSTF2T-201ENST00000331173 ABCA10Q8WWZ4 1543 aa11.78□□□□□ -0.52
CSTF2T-201ENST00000331173 BIVM-ERCC5R4GMW8 1640 aa11.77□□□□□ -0.52
CSTF2T-201ENST00000331173 GOLGA3Q08378 1498 aa11.77□□□□□ -0.53
CSTF2T-201ENST00000331173 ITGAEP38570 1179 aa11.76□□□□□ -0.53
CSTF2T-201ENST00000331173 IGF1RP08069 1367 aa11.76□□□□□ -0.53
Retrieved 100 of 20,778 RNA–protein pairs in 23.8 ms