RNA–Protein interactions for RNA: ENST00000450288.3

PDXDC1-203, Transcript of pyridoxal dependent decarboxylase domain containing 1, humanhuman

TSL 5 BASIC

Gene PDXDC1, Length 4,171 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDXDC1-203ENST00000450288 NISCHQ9Y2I1 1504 aa16.38■□□□□ 0.21
PDXDC1-203ENST00000450288 DCAF8L2P0C7V8 631 aa15.58■□□□□ 0.08
PDXDC1-203ENST00000450288 SHROOM4Q9ULL8 1493 aa14.84□□□□□ -0.03
PDXDC1-203ENST00000450288 SUPT5HO00267 1087 aaKnown RBP14.54□□□□□ -0.08
PDXDC1-203ENST00000450288 ABCC9O60706 1549 aa14.24□□□□□ -0.13
PDXDC1-203ENST00000450288 EHMT2Q96KQ7 1210 aa13.92□□□□□ -0.18
PDXDC1-203ENST00000450288 PABPN1Q86U42 306 aaKnown RBP eCLIP13.89□□□□□ -0.198e-6■□□□□ 8.9
PDXDC1-203ENST00000450288 CCDC180Q9P1Z9 1646 aa13.68□□□□□ -0.22
PDXDC1-203ENST00000450288 FAM9AQ8IZU1 332 aaPredicted RBP13.65□□□□□ -0.22
PDXDC1-203ENST00000450288 ZCCHC6Q5VYS8 1495 aaKnown RBP13.59□□□□□ -0.23
PDXDC1-203ENST00000450288 SCRIBQ14160 1630 aa13.51□□□□□ -0.25
PDXDC1-203ENST00000450288 TRIM41Q8WV44 630 aa13.38□□□□□ -0.27
PDXDC1-203ENST00000450288 RANGAP1P46060 587 aaPredicted RBP13.38□□□□□ -0.27
PDXDC1-203ENST00000450288 TTBK1Q5TCY1 1321 aaPredicted RBP13.28□□□□□ -0.28
PDXDC1-203ENST00000450288 RB1CC1Q8TDY2 1594 aa13.2□□□□□ -0.3
PDXDC1-203ENST00000450288 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
PDXDC1-203ENST00000450288 LOC105371045A0A1W2PR82 267 aa13.14□□□□□ -0.31
PDXDC1-203ENST00000450288 NACADO15069 1562 aa13.12□□□□□ -0.31
PDXDC1-203ENST00000450288 UBTFP17480 764 aaKnown RBP13.08□□□□□ -0.32
PDXDC1-203ENST00000450288 PPARGC1BQ86YN6 1023 aaKnown RBP13.07□□□□□ -0.32
PDXDC1-203ENST00000450288 CECR2Q9BXF3 1484 aa13.05□□□□□ -0.32
PDXDC1-203ENST00000450288 ATP1B4Q9UN42 357 aaPredicted RBP12.99□□□□□ -0.33
PDXDC1-203ENST00000450288 DCAF1Q9Y4B6 1507 aa12.97□□□□□ -0.33
PDXDC1-203ENST00000450288 RSF1Q96T23 1441 aaPredicted RBP12.95□□□□□ -0.34
PDXDC1-203ENST00000450288 PCGF6Q9BYE7 350 aa12.89□□□□□ -0.35
PDXDC1-203ENST00000450288 APLP2Q06481 763 aa12.88□□□□□ -0.35
PDXDC1-203ENST00000450288 MROH2BQ7Z745 1585 aa12.81□□□□□ -0.36
PDXDC1-203ENST00000450288 FBLN2P98095 1184 aa12.75□□□□□ -0.37
PDXDC1-203ENST00000450288 BAZ1BQ9UIG0 1483 aaKnown RBP12.71□□□□□ -0.37
PDXDC1-203ENST00000450288 MYO15BQ96JP2 1530 aa12.7□□□□□ -0.38
PDXDC1-203ENST00000450288 BAZ1AQ9NRL2 1556 aaPredicted RBP12.69□□□□□ -0.38
PDXDC1-203ENST00000450288 WIZO95785 1651 aa12.67□□□□□ -0.38
PDXDC1-203ENST00000450288 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP12.65□□□□□ -0.38
PDXDC1-203ENST00000450288 HNRNPUL2Q1KMD3 747 aaKnown RBP12.65□□□□□ -0.38
PDXDC1-203ENST00000450288 P3H3Q8IVL6 736 aa12.64□□□□□ -0.39
PDXDC1-203ENST00000450288 ITGAEP38570 1179 aa12.61□□□□□ -0.39
PDXDC1-203ENST00000450288 ARID3CA6NKF2 412 aa12.61□□□□□ -0.39
PDXDC1-203ENST00000450288 CSRNP3Q8WYN3 585 aa12.6□□□□□ -0.39
PDXDC1-203ENST00000450288 DNAJC5BQ9UF47 199 aa12.55□□□□□ -0.4
PDXDC1-203ENST00000450288 CCDC88BA6NC98 1476 aa12.55□□□□□ -0.4
PDXDC1-203ENST00000450288 ATAD2BQ9ULI0 1458 aa12.5□□□□□ -0.41
PDXDC1-203ENST00000450288 SMARCA4P51532 1647 aa12.49□□□□□ -0.41
PDXDC1-203ENST00000450288 ABCC8Q09428 1581 aa12.47□□□□□ -0.41
PDXDC1-203ENST00000450288 WRNQ14191 1432 aaPredicted RBP eCLIP12.45□□□□□ -0.42
PDXDC1-203ENST00000450288 CCER1Q8TC90 406 aaPredicted RBP12.44□□□□□ -0.42
PDXDC1-203ENST00000450288 BICRAQ9NZM4 1560 aa12.43□□□□□ -0.42
PDXDC1-203ENST00000450288 SMARCA2P51531 1590 aa12.41□□□□□ -0.42
PDXDC1-203ENST00000450288 EIF4G1Q04637 1599 aaKnown RBP12.4□□□□□ -0.42
PDXDC1-203ENST00000450288 ERCC6Q03468 1493 aa12.39□□□□□ -0.43
PDXDC1-203ENST00000450288 TRIM26Q12899 539 aaPredicted RBP12.38□□□□□ -0.43
PDXDC1-203ENST00000450288 SOGA1O94964 1423 aa12.38□□□□□ -0.43
PDXDC1-203ENST00000450288 TOP2AP11388 1531 aaKnown RBP12.37□□□□□ -0.43
PDXDC1-203ENST00000450288 UNC13AQ9UPW8 1703 aa12.35□□□□□ -0.43
PDXDC1-203ENST00000450288 MYT1LQ9UL68 1186 aa12.34□□□□□ -0.43
PDXDC1-203ENST00000450288 CHMP7Q8WUX9 453 aaPredicted RBP12.32□□□□□ -0.44
PDXDC1-203ENST00000450288 FAM50AQ14320 339 aaKnown RBP12.32□□□□□ -0.44
PDXDC1-203ENST00000450288 CADPSQ9ULU8 1353 aa12.3□□□□□ -0.44
PDXDC1-203ENST00000450288 TDRD9Q8NDG6 1382 aaKnown RBP12.29□□□□□ -0.44
PDXDC1-203ENST00000450288 CC2D2AQ9P2K1 1620 aa12.27□□□□□ -0.44
PDXDC1-203ENST00000450288 NESP48681 1621 aa12.27□□□□□ -0.45
PDXDC1-203ENST00000450288 CUX2O14529 1486 aa12.24□□□□□ -0.45
PDXDC1-203ENST00000450288 RUSC2Q8N2Y8 1516 aa12.23□□□□□ -0.45
PDXDC1-203ENST00000450288 NCAPD3P42695 1498 aa12.22□□□□□ -0.45
PDXDC1-203ENST00000450288 KIF27Q86VH2 1401 aa12.19□□□□□ -0.46
PDXDC1-203ENST00000450288 PDS5BQ9NTI5 1447 aa12.19□□□□□ -0.46
PDXDC1-203ENST00000450288 ZNF777Q9ULD5 760 aaPredicted RBP12.19□□□□□ -0.46
PDXDC1-203ENST00000450288 FANCD2Q9BXW9 1451 aa12.17□□□□□ -0.46
PDXDC1-203ENST00000450288 CLIP1P30622 1438 aa12.15□□□□□ -0.46
PDXDC1-203ENST00000450288 CEP162Q5TB80 1403 aa12.13□□□□□ -0.47
PDXDC1-203ENST00000450288 CARMIL1Q5VZK9 1371 aa12.12□□□□□ -0.47
PDXDC1-203ENST00000450288 CEP164Q9UPV0 1460 aa12.11□□□□□ -0.47
PDXDC1-203ENST00000450288 RAD54L2Q9Y4B4 1467 aa12.11□□□□□ -0.47
PDXDC1-203ENST00000450288 GOLGA3Q08378 1498 aa12.1□□□□□ -0.47
PDXDC1-203ENST00000450288 TRIM52Q96A61 297 aa12.08□□□□□ -0.48
PDXDC1-203ENST00000450288 KCNH8Q96L42 1107 aa12.08□□□□□ -0.48
PDXDC1-203ENST00000450288 CHIC2Q9UKJ5 165 aa12.07□□□□□ -0.48
PDXDC1-203ENST00000450288 NEUROD1Q13562 356 aa12.05□□□□□ -0.48
PDXDC1-203ENST00000450288 EEA1Q15075 1411 aa12.05□□□□□ -0.48
PDXDC1-203ENST00000450288 CNGB1Q14028 1251 aaPredicted RBP12.03□□□□□ -0.48
PDXDC1-203ENST00000450288 FGD5Q6ZNL6 1462 aa12.03□□□□□ -0.48
PDXDC1-203ENST00000450288 HRCP23327 699 aa12.02□□□□□ -0.48
PDXDC1-203ENST00000450288 RAPGEF2Q9Y4G8 1499 aa12.02□□□□□ -0.49
PDXDC1-203ENST00000450288 TNIKQ9UKE5 1360 aa12.02□□□□□ -0.49
PDXDC1-203ENST00000450288 CFTRP13569 1480 aa12.01□□□□□ -0.49
PDXDC1-203ENST00000450288 AQRO60306 1485 aaKnown RBP eCLIP12.01□□□□□ -0.494e-7■■■□□ 18.5
PDXDC1-203ENST00000450288 POLR3GLQ9BT43 218 aa11.98□□□□□ -0.49
PDXDC1-203ENST00000450288 HMGXB3Q12766 1538 aa11.98□□□□□ -0.49
PDXDC1-203ENST00000450288 SYNJ1O43426 1573 aa11.98□□□□□ -0.49
PDXDC1-203ENST00000450288 MTUS2Q5JR59 1369 aa11.97□□□□□ -0.49
PDXDC1-203ENST00000450288 CDK11AQ9UQ88 783 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-203ENST00000450288 NPM1P06748 294 aaKnown RBP eCLIP11.97□□□□□ -0.49
PDXDC1-203ENST00000450288 ZEB1P37275 1124 aaPredicted RBP11.97□□□□□ -0.49
PDXDC1-203ENST00000450288 PLPPR3Q6T4P5 718 aa11.96□□□□□ -0.5
PDXDC1-203ENST00000450288 KANK4Q5T7N3 995 aaPredicted RBP11.95□□□□□ -0.5
PDXDC1-203ENST00000450288 ZNF326Q5BKZ1 582 aaKnown RBP11.93□□□□□ -0.5
PDXDC1-203ENST00000450288 IGF1RP08069 1367 aa11.93□□□□□ -0.5
PDXDC1-203ENST00000450288 CUX1P39880 1505 aa11.91□□□□□ -0.5
PDXDC1-203ENST00000450288 RRP7BPQ9NSQ0 103 aa11.9□□□□□ -0.5
PDXDC1-203ENST00000450288 FHOD3Q2V2M9 1422 aa11.89□□□□□ -0.51
PDXDC1-203ENST00000450288 PLEKHD1A6NEE1 506 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 13.3 ms