RNA–Protein interactions for RNA: ENST00000353788.8

SNX16-202, Transcript of sorting nexin 16, humanhuman

TSL 1 (best) BASIC

Gene SNX16, Length 3,032 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX16-202ENST00000353788 NISCHQ9Y2I1 1504 aa18.6■□□□□ 0.57
SNX16-202ENST00000353788 CCDC180Q9P1Z9 1646 aa16.63■□□□□ 0.25
SNX16-202ENST00000353788 DCAF1Q9Y4B6 1507 aa15.72■□□□□ 0.11
SNX16-202ENST00000353788 MYO15BQ96JP2 1530 aa15.71■□□□□ 0.11
SNX16-202ENST00000353788 ZCCHC6Q5VYS8 1495 aaKnown RBP15.63■□□□□ 0.09
SNX16-202ENST00000353788 NACADO15069 1562 aa15.47■□□□□ 0.07
SNX16-202ENST00000353788 ABCC9O60706 1549 aa15.34■□□□□ 0.05
SNX16-202ENST00000353788 RB1CC1Q8TDY2 1594 aa15.31■□□□□ 0.04
SNX16-202ENST00000353788 SHROOM4Q9ULL8 1493 aa15.07■□□□□ 0
SNX16-202ENST00000353788 UNC13AQ9UPW8 1703 aa14.84□□□□□ -0.03
SNX16-202ENST00000353788 SCRIBQ14160 1630 aa14.75□□□□□ -0.05
SNX16-202ENST00000353788 BICRAQ9NZM4 1560 aa14.74□□□□□ -0.05
SNX16-202ENST00000353788 DCAF8L2P0C7V8 631 aa14.7□□□□□ -0.06
SNX16-202ENST00000353788 BAZ1AQ9NRL2 1556 aaPredicted RBP14.45□□□□□ -0.1
SNX16-202ENST00000353788 PEG3Q9GZU2 1588 aa14.42□□□□□ -0.1
SNX16-202ENST00000353788 SMARCA4P51532 1647 aa14.36□□□□□ -0.11
SNX16-202ENST00000353788 EIF4G1Q04637 1599 aaKnown RBP14.3□□□□□ -0.12
SNX16-202ENST00000353788 SMARCA2P51531 1590 aa14.28□□□□□ -0.12
SNX16-202ENST00000353788 HMGXB3Q12766 1538 aa14.24□□□□□ -0.13
SNX16-202ENST00000353788 PABPN1Q86U42 306 aaKnown RBP eCLIP14.22□□□□□ -0.13
SNX16-202ENST00000353788 CECR2Q9BXF3 1484 aa14.21□□□□□ -0.14
SNX16-202ENST00000353788 RSF1Q96T23 1441 aaPredicted RBP14.2□□□□□ -0.14
SNX16-202ENST00000353788 NCAPD3P42695 1498 aa14.19□□□□□ -0.14
SNX16-202ENST00000353788 MROH2BQ7Z745 1585 aa14.19□□□□□ -0.14
SNX16-202ENST00000353788 ATAD2BQ9ULI0 1458 aa14.14□□□□□ -0.15
SNX16-202ENST00000353788 TOP2AP11388 1531 aaKnown RBP14.13□□□□□ -0.15
SNX16-202ENST00000353788 CC2D2AQ9P2K1 1620 aa14.09□□□□□ -0.15
SNX16-202ENST00000353788 WIZO95785 1651 aa14.02□□□□□ -0.16
SNX16-202ENST00000353788 BAZ1BQ9UIG0 1483 aaKnown RBP14.01□□□□□ -0.17
SNX16-202ENST00000353788 PRDM2Q13029 1718 aa13.83□□□□□ -0.2
SNX16-202ENST00000353788 LAMC3Q9Y6N6 1575 aa13.79□□□□□ -0.2
SNX16-202ENST00000353788 CCDC88BA6NC98 1476 aa13.79□□□□□ -0.2
SNX16-202ENST00000353788 CFTRP13569 1480 aa13.75□□□□□ -0.21
SNX16-202ENST00000353788 CADPSQ9ULU8 1353 aa13.68□□□□□ -0.22
SNX16-202ENST00000353788 SUPT5HO00267 1087 aaKnown RBP13.64□□□□□ -0.23
SNX16-202ENST00000353788 DNAJC5BQ9UF47 199 aa13.61□□□□□ -0.23
SNX16-202ENST00000353788 PDS5BQ9NTI5 1447 aa13.58□□□□□ -0.23
SNX16-202ENST00000353788 ABCC8Q09428 1581 aa13.58□□□□□ -0.23
SNX16-202ENST00000353788 BIVM-ERCC5R4GMW8 1640 aa13.5□□□□□ -0.25
SNX16-202ENST00000353788 WDR97A6NE52 1622 aa13.49□□□□□ -0.25
SNX16-202ENST00000353788 FANCD2Q9BXW9 1451 aa13.48□□□□□ -0.25
SNX16-202ENST00000353788 CEP164Q9UPV0 1460 aa13.47□□□□□ -0.25
SNX16-202ENST00000353788 DNMBPQ6XZF7 1577 aa13.46□□□□□ -0.26
SNX16-202ENST00000353788 TOP2BQ02880 1626 aa13.45□□□□□ -0.26
SNX16-202ENST00000353788 WDR62O43379 1518 aa13.44□□□□□ -0.26
SNX16-202ENST00000353788 MRC2Q9UBG0 1479 aa13.43□□□□□ -0.26
SNX16-202ENST00000353788 THOC2Q8NI27 1593 aaKnown RBP13.41□□□□□ -0.26
SNX16-202ENST00000353788 KIF21AQ7Z4S6 1674 aa13.4□□□□□ -0.26
SNX16-202ENST00000353788 NESP48681 1621 aa13.38□□□□□ -0.27
SNX16-202ENST00000353788 WRNQ14191 1432 aaPredicted RBP eCLIP13.38□□□□□ -0.27
SNX16-202ENST00000353788 CUX1P39880 1505 aa13.34□□□□□ -0.27
SNX16-202ENST00000353788 TOPBP1Q92547 1522 aa13.33□□□□□ -0.27
SNX16-202ENST00000353788 CUX2O14529 1486 aa13.33□□□□□ -0.28
SNX16-202ENST00000353788 EEA1Q15075 1411 aa13.31□□□□□ -0.28
SNX16-202ENST00000353788 URB2Q14146 1524 aaKnown RBP13.31□□□□□ -0.28
SNX16-202ENST00000353788 SYNJ1O43426 1573 aa13.3□□□□□ -0.28
SNX16-202ENST00000353788 ERCC6Q03468 1493 aa13.28□□□□□ -0.28
SNX16-202ENST00000353788 IFT140Q96RY7 1462 aa13.27□□□□□ -0.29
SNX16-202ENST00000353788 ABCA10Q8WWZ4 1543 aa13.26□□□□□ -0.29
SNX16-202ENST00000353788 TARBP1Q13395 1621 aaKnown RBP13.23□□□□□ -0.29
SNX16-202ENST00000353788 POLA1P09884 1462 aaPredicted RBP13.21□□□□□ -0.29
SNX16-202ENST00000353788 FGD5Q6ZNL6 1462 aa13.21□□□□□ -0.3
SNX16-202ENST00000353788 CHIC1Q5VXU3 224 aa13.19□□□□□ -0.3
SNX16-202ENST00000353788 ABCA5Q8WWZ7 1642 aa13.18□□□□□ -0.3
SNX16-202ENST00000353788 ERICH3Q5RHP9 1530 aa13.15□□□□□ -0.3
SNX16-202ENST00000353788 CUL7Q14999 1698 aa13.13□□□□□ -0.31
SNX16-202ENST00000353788 SOGA1O94964 1423 aa13.12□□□□□ -0.31
SNX16-202ENST00000353788 KIF27Q86VH2 1401 aa13.12□□□□□ -0.31
SNX16-202ENST00000353788 TRIM41Q8WV44 630 aa13.09□□□□□ -0.31
SNX16-202ENST00000353788 KIF21BO75037 1637 aa13.08□□□□□ -0.32
SNX16-202ENST00000353788 MAGI1Q96QZ7 1491 aaPredicted RBP13.05□□□□□ -0.32
SNX16-202ENST00000353788 PBRM1Q86U86 1689 aa13.05□□□□□ -0.32
SNX16-202ENST00000353788 GRIN2BQ13224 1484 aa13.05□□□□□ -0.32
SNX16-202ENST00000353788 EIF4G3O43432 1585 aaKnown RBP13.03□□□□□ -0.32
SNX16-202ENST00000353788 GAPVD1Q14C86 1478 aa13.03□□□□□ -0.32
SNX16-202ENST00000353788 PRXQ9BXM0 1461 aa13.01□□□□□ -0.33
SNX16-202ENST00000353788 ADAMTS12P58397 1594 aa13□□□□□ -0.33
SNX16-202ENST00000353788 RAD54L2Q9Y4B4 1467 aa12.99□□□□□ -0.33
SNX16-202ENST00000353788 FHAD1B1AJZ9 1412 aa12.97□□□□□ -0.33
SNX16-202ENST00000353788 IGF1RP08069 1367 aa12.96□□□□□ -0.34
SNX16-202ENST00000353788 SYNJ2O15056 1496 aa12.93□□□□□ -0.34
SNX16-202ENST00000353788 RAPGEF2Q9Y4G8 1499 aa12.92□□□□□ -0.34
SNX16-202ENST00000353788 GOLGA3Q08378 1498 aa12.92□□□□□ -0.34
SNX16-202ENST00000353788 ZNF608Q9ULD9 1512 aaPredicted RBP12.9□□□□□ -0.34
SNX16-202ENST00000353788 CSRNP3Q8WYN3 585 aa12.9□□□□□ -0.34
SNX16-202ENST00000353788 CARMIL1Q5VZK9 1371 aa12.87□□□□□ -0.35
SNX16-202ENST00000353788 SNAPC4Q5SXM2 1469 aa12.86□□□□□ -0.35
SNX16-202ENST00000353788 NUP160Q12769 1436 aa12.86□□□□□ -0.35
SNX16-202ENST00000353788 CTTNBP2Q8WZ74 1663 aa12.85□□□□□ -0.35
SNX16-202ENST00000353788 AQRO60306 1485 aaKnown RBP eCLIP12.84□□□□□ -0.35
SNX16-202ENST00000353788 GRIN2AQ12879 1464 aa12.84□□□□□ -0.35
SNX16-202ENST00000353788 RUSC2Q8N2Y8 1516 aa12.84□□□□□ -0.35
SNX16-202ENST00000353788 TDRD9Q8NDG6 1382 aaKnown RBP12.84□□□□□ -0.35
SNX16-202ENST00000353788 TNIKQ9UKE5 1360 aa12.83□□□□□ -0.36
SNX16-202ENST00000353788 EFCAB5A4FU69 1503 aa12.81□□□□□ -0.36
SNX16-202ENST00000353788 KIAA0586Q9BVV6 1533 aa12.8□□□□□ -0.36
SNX16-202ENST00000353788 SHROOM2Q13796 1616 aa12.79□□□□□ -0.36
SNX16-202ENST00000353788 CLASP1Q7Z460 1538 aa12.78□□□□□ -0.36
SNX16-202ENST00000353788 UGGT2Q9NYU1 1516 aa12.78□□□□□ -0.36
SNX16-202ENST00000353788 CHD1O14646 1710 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms