RNA–Protein interactions for RNA: ENST00000459235.1

snoU13.28-201, humanhuman

BASIC

Gene snoU13, Length 104 nt, Biotype snoRNA, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
snoU13.28-201ENST00000459235 CHIC1Q5VXU3 224 aa9.55□□□□□ -0.88
snoU13.28-201ENST00000459235 AEBP2Q6ZN18 517 aaPredicted RBP9.16□□□□□ -0.94
snoU13.28-201ENST00000459235 PHF23Q9BUL5 403 aaPredicted RBP8.38□□□□□ -1.07
snoU13.28-201ENST00000459235 PLPPR3Q6T4P5 718 aa8.03□□□□□ -1.12
snoU13.28-201ENST00000459235 SENP3Q9H4L4 574 aaPredicted RBP7.8□□□□□ -1.16
snoU13.28-201ENST00000459235 EHMT2Q96KQ7 1210 aa7.59□□□□□ -1.19
snoU13.28-201ENST00000459235 KCNA4P22459 653 aa7.47□□□□□ -1.21
snoU13.28-201ENST00000459235 ADRA2BP18089 450 aa7.36□□□□□ -1.23
snoU13.28-201ENST00000459235 CSRNP3Q8WYN3 585 aa7.3□□□□□ -1.24
snoU13.28-201ENST00000459235 SLC4A1APQ9BWU0 796 aaKnown RBP7.27□□□□□ -1.25
snoU13.28-201ENST00000459235 PPP6R1Q9UPN7 881 aa7.21□□□□□ -1.26
snoU13.28-201ENST00000459235 NCBP3Q53F19 620 aaKnown RBP7.15□□□□□ -1.26
snoU13.28-201ENST00000459235 SLC24A1O60721 1099 aa7.13□□□□□ -1.27
snoU13.28-201ENST00000459235 FOXD1Q16676 465 aa7.1□□□□□ -1.27
snoU13.28-201ENST00000459235 PPP4R3CPQ6ZMV5 832 aa7.1□□□□□ -1.27
snoU13.28-201ENST00000459235 AMER1Q5JTC6 1135 aaPredicted RBP7□□□□□ -1.29
snoU13.28-201ENST00000459235 NPM3O75607 178 aaKnown RBP6.93□□□□□ -1.3
snoU13.28-201ENST00000459235 RTN4Q9NQC3 1192 aaKnown RBP6.87□□□□□ -1.31
snoU13.28-201ENST00000459235 ZBTB22O15209 634 aa6.84□□□□□ -1.31
snoU13.28-201ENST00000459235 PIAS4Q8N2W9 510 aaPredicted RBP6.83□□□□□ -1.32
snoU13.28-201ENST00000459235 CNKSR2Q8WXI2 1034 aa6.83□□□□□ -1.32
snoU13.28-201ENST00000459235 FOXD4L1Q9NU39 408 aa6.8□□□□□ -1.32
snoU13.28-201ENST00000459235 SCAF1Q9H7N4 1312 aaKnown RBP6.78□□□□□ -1.32
snoU13.28-201ENST00000459235 DNAJC5BQ9UF47 199 aa6.78□□□□□ -1.32
snoU13.28-201ENST00000459235 ATXN8OSP0DMR3 200 aa6.58□□□□□ -1.36
snoU13.28-201ENST00000459235 FKBP8Q14318 412 aa6.57□□□□□ -1.36
snoU13.28-201ENST00000459235 RNF216Q9NWF9 866 aaPredicted RBP6.55□□□□□ -1.36
snoU13.28-201ENST00000459235 MYCNP04198 464 aaPredicted RBP6.45□□□□□ -1.38
snoU13.28-201ENST00000459235 MSH5O43196 834 aa6.43□□□□□ -1.38
snoU13.28-201ENST00000459235 SLC4A2P04920 1241 aa6.4□□□□□ -1.38
snoU13.28-201ENST00000459235 MAPK8IP2Q13387 824 aaPredicted RBP6.4□□□□□ -1.38
snoU13.28-201ENST00000459235 HOXD11P31277 338 aaPredicted RBP6.38□□□□□ -1.39
snoU13.28-201ENST00000459235 PLCB2Q00722 1185 aa6.38□□□□□ -1.39
snoU13.28-201ENST00000459235 BCANQ96GW7 911 aa6.34□□□□□ -1.39
snoU13.28-201ENST00000459235 FBXO3Q9UK99 471 aa6.31□□□□□ -1.4
snoU13.28-201ENST00000459235 DMRT2Q9Y5R5 561 aa6.28□□□□□ -1.4
snoU13.28-201ENST00000459235 HAP1P54257 671 aaPredicted RBP6.27□□□□□ -1.41
snoU13.28-201ENST00000459235 VSIG10Q8N0Z9 540 aa6.27□□□□□ -1.41
snoU13.28-201ENST00000459235 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP6.23□□□□□ -1.41
snoU13.28-201ENST00000459235 HNRNPUL2Q1KMD3 747 aaKnown RBP6.23□□□□□ -1.41
snoU13.28-201ENST00000459235 TAOK2Q9UL54 1235 aa6.23□□□□□ -1.41
snoU13.28-201ENST00000459235 SAMD1Q6SPF0 538 aaPredicted RBP6.2□□□□□ -1.42
snoU13.28-201ENST00000459235 PRKCSHP14314 528 aaPredicted RBP6.17□□□□□ -1.42
snoU13.28-201ENST00000459235 DCAF8L2P0C7V8 631 aa6.15□□□□□ -1.42
snoU13.28-201ENST00000459235 ZBTB4Q9P1Z0 1013 aaPredicted RBP6.13□□□□□ -1.43
snoU13.28-201ENST00000459235 ATF5Q9Y2D1 282 aaPredicted RBP6.13□□□□□ -1.43
snoU13.28-201ENST00000459235 VASPP50552 380 aaPredicted RBP6.12□□□□□ -1.43
snoU13.28-201ENST00000459235 TPRNQ4KMQ1 711 aa6.11□□□□□ -1.43
snoU13.28-201ENST00000459235 SPDYE4A6NLX3 237 aa6.09□□□□□ -1.43
snoU13.28-201ENST00000459235 BBXQ8WY36 941 aaPredicted RBP6.09□□□□□ -1.43
snoU13.28-201ENST00000459235 ERICH6Q7L0X2 663 aa6.08□□□□□ -1.44
snoU13.28-201ENST00000459235 PROM2Q8N271 834 aa6.08□□□□□ -1.44
snoU13.28-201ENST00000459235 GRWD1Q9BQ67 446 aaKnown RBP eCLIP6.08□□□□□ -1.44
snoU13.28-201ENST00000459235 APLP2Q06481 763 aa6.07□□□□□ -1.44
snoU13.28-201ENST00000459235 PKD2Q13563 968 aa6.05□□□□□ -1.44
snoU13.28-201ENST00000459235 ZNF219Q9P2Y4 722 aaPredicted RBP6.05□□□□□ -1.44
snoU13.28-201ENST00000459235 IFNLR1Q8IU57 520 aaPredicted RBP6.04□□□□□ -1.44
snoU13.28-201ENST00000459235 KDM2AQ9Y2K7 1162 aa6.02□□□□□ -1.45
snoU13.28-201ENST00000459235 PAXIP1Q6ZW49 1069 aaPredicted RBP6□□□□□ -1.45
snoU13.28-201ENST00000459235 U3KPZ7 1027 aaPredicted RBP5.99□□□□□ -1.45
snoU13.28-201ENST00000459235 SPRYD3Q8NCJ5 442 aa5.98□□□□□ -1.45
snoU13.28-201ENST00000459235 ARXQ96QS3 562 aa5.98□□□□□ -1.45
snoU13.28-201ENST00000459235 FBLN2P98095 1184 aa5.97□□□□□ -1.45
snoU13.28-201ENST00000459235 CFAP44Q96MT7 982 aa5.97□□□□□ -1.45
snoU13.28-201ENST00000459235 SPOCK2Q92563 424 aa5.95□□□□□ -1.46
snoU13.28-201ENST00000459235 DAXXQ9UER7 740 aaPredicted RBP5.95□□□□□ -1.46
snoU13.28-201ENST00000459235 DCAF8L1A6NGE4 600 aa5.94□□□□□ -1.46
snoU13.28-201ENST00000459235 ECM2O94769 699 aaPredicted RBP5.94□□□□□ -1.46
snoU13.28-201ENST00000459235 NBR1Q14596 966 aa5.93□□□□□ -1.46
snoU13.28-201ENST00000459235 KLHL34Q8N239 644 aa5.92□□□□□ -1.46
snoU13.28-201ENST00000459235 NPM1P06748 294 aaKnown RBP eCLIP5.91□□□□□ -1.46
snoU13.28-201ENST00000459235 MKRN4PQ13434 485 aaPredicted RBP5.91□□□□□ -1.46
snoU13.28-201ENST00000459235 GTF3C3Q9Y5Q9 886 aa5.91□□□□□ -1.46
snoU13.28-201ENST00000459235 TULP1O00294 542 aaPredicted RBP5.89□□□□□ -1.47
snoU13.28-201ENST00000459235 TSHZ2Q9NRE2 1034 aa5.89□□□□□ -1.47
snoU13.28-201ENST00000459235 TIMELESSQ9UNS1 1208 aa5.89□□□□□ -1.47
snoU13.28-201ENST00000459235 DNAJC5Q9H3Z4 198 aa5.87□□□□□ -1.47
snoU13.28-201ENST00000459235 STAG3Q9UJ98 1225 aa5.87□□□□□ -1.47
snoU13.28-201ENST00000459235 TMEM132AQ24JP5 1023 aa5.84□□□□□ -1.47
snoU13.28-201ENST00000459235 RGL2O15211 777 aa5.83□□□□□ -1.48
snoU13.28-201ENST00000459235 TRIM41Q8WV44 630 aa5.82□□□□□ -1.48
snoU13.28-201ENST00000459235 CHGAP10645 457 aaKnown RBP5.81□□□□□ -1.48
snoU13.28-201ENST00000459235 HOMEZQ8IX15 550 aa5.81□□□□□ -1.48
snoU13.28-201ENST00000459235 PLCD3Q8N3E9 789 aa5.8□□□□□ -1.48
snoU13.28-201ENST00000459235 ZBTB12Q9Y330 459 aaPredicted RBP5.8□□□□□ -1.48
snoU13.28-201ENST00000459235 ZBTB47Q9UFB7 747 aaPredicted RBP5.78□□□□□ -1.48
snoU13.28-201ENST00000459235 POLA2Q14181 598 aa5.76□□□□□ -1.49
snoU13.28-201ENST00000459235 HS6ST3Q8IZP7 471 aa5.76□□□□□ -1.49
snoU13.28-201ENST00000459235 PLEKHG5O94827 1062 aa5.75□□□□□ -1.49
snoU13.28-201ENST00000459235 MIER1Q8N108 512 aa5.74□□□□□ -1.49
snoU13.28-201ENST00000459235 C14orf37Q86TY3 774 aa5.73□□□□□ -1.49
snoU13.28-201ENST00000459235 CIZ1Q9ULV3 898 aaPredicted RBP5.73□□□□□ -1.49
snoU13.28-201ENST00000459235 TRHP20396 242 aaPredicted RBP5.72□□□□□ -1.49
snoU13.28-201ENST00000459235 ZNF692Q9BU19 519 aaPredicted RBP5.69□□□□□ -1.5
snoU13.28-201ENST00000459235 RYDENQ9NUL5 291 aaKnown RBP5.68□□□□□ -1.5
snoU13.28-201ENST00000459235 SPDYE2BA6NHP3 402 aa5.67□□□□□ -1.5
snoU13.28-201ENST00000459235 SPDYE6P0CI01 402 aa5.67□□□□□ -1.5
snoU13.28-201ENST00000459235 GSE1Q14687 1217 aa5.67□□□□□ -1.5
snoU13.28-201ENST00000459235 SPDYE2Q495Y8 402 aa5.67□□□□□ -1.5
snoU13.28-201ENST00000459235 P3H3Q8IVL6 736 aa5.67□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 14.8 ms