Protein–RNA interactions for Protein: A0A0B4J248

TRAV1-1, T-cell receptor alpha variable 1-1 (Fragment), humanhuman

Predictions only

Length 108 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV1-1A0A0B4J248 AL354811.1-201ENST00000610286 706 ntBASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 MRM1-203ENST00000612760 1284 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 GPX1-204ENST00000620890 897 ntAPPRIS ALT2 TSL 5 BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 LMAN1L-202ENST00000379709 1699 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 BSCL2-207ENST00000407022 1516 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 NFE2-204ENST00000553070 1523 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 ZNF416-201ENST00000196489 2561 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 ADCY3-201ENST00000260600 5050 ntAPPRIS P3 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 AC104417.2-201ENST00000562989 1793 ntBASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 PXK-206ENST00000463280 2825 ntTSL 2 BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 SPINT2-202ENST00000454580 1367 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 DYNLL1-209ENST00000550845 1376 ntTSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 SDHAP1-207ENST00000440850 2000 ntBASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 EPS8L2-205ENST00000526198 2289 ntAPPRIS ALT2 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 GAL3ST4-201ENST00000360039 2537 ntAPPRIS P1 TSL 1 (best) BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 CELF6-205ENST00000567083 1496 ntAPPRIS ALT2 TSL 2 BASIC14.95□□□□□ -0.02
TRAV1-1A0A0B4J248 EEF1D-225ENST00000529272 1311 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ZBTB33-201ENST00000326624 5211 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 CCDC43-201ENST00000315286 2082 ntAPPRIS P2 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 KIAA1324L-208ENST00000450689 6841 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PRRT1-201ENST00000211413 1909 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ALDH3A1-206ENST00000457500 1925 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 EHMT1-236ENST00000637161 5049 ntAPPRIS ALT2 TSL 5 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 DDX1-207ENST00000617198 2257 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 LTBP1-203ENST00000404816 6333 ntAPPRIS P4 TSL 5 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PCBP4-210ENST00000471622 1784 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PITPNM2-209ENST00000546049 1793 ntTSL 5 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 KLHL35-201ENST00000376292 1500 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ALKBH6-213ENST00000486389 1525 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 LIN7B-202ENST00000391864 582 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 NT5C3AP1-201ENST00000394500 1012 ntBASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ZNF32-202ENST00000395797 1201 ntAPPRIS P1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PRKCQ-AS1-202ENST00000445427 1133 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 AC023632.3-201ENST00000521633 145 ntBASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 AC027682.1-201ENST00000562846 899 ntBASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 RPRD1A-207ENST00000588737 1264 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 AC244517.4-202ENST00000624089 484 ntTSL 3 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PCDHA12-202ENST00000613593 2588 ntBASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 SPRED3-202ENST00000586301 1366 ntAPPRIS P1 TSL 5 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 HPGD-213ENST00000541923 2920 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ARHGAP8-204ENST00000389774 1725 ntAPPRIS ALT2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ADAMTS16-203ENST00000511368 2682 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PILRB-208ENST00000452089 2099 ntAPPRIS P2 TSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 ZNF264-202ENST00000536056 2078 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 MOAP1-201ENST00000298894 2441 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 MCM9-201ENST00000316068 2442 ntTSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 MPST-205ENST00000404802 1453 ntAPPRIS P1 TSL 3 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 PRPF19-201ENST00000227524 2157 ntAPPRIS P1 TSL 1 (best) BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 GOLGA2P7-201ENST00000316967 2525 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 C2CD3-213ENST00000539061 2722 ntTSL 2 BASIC14.94□□□□□ -0.02
TRAV1-1A0A0B4J248 FAM49B-214ENST00000519540 2021 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 C21orf58-205ENST00000397683 1674 ntAPPRIS ALT2 TSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 STARD3-209ENST00000544210 1666 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 AC090206.1-201ENST00000615734 1678 ntTSL 5 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 SPRED3-201ENST00000338502 4778 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 KREMEN2-206ENST00000575885 1798 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 TRIM41-202ENST00000351937 2696 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 PANX1-202ENST00000436171 2750 ntAPPRIS ALT1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 RABGAP1L-204ENST00000357444 2605 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 BPIFB4-201ENST00000375483 2159 ntAPPRIS P1 TSL 5 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 PNMA6E-201ENST00000445091 2192 ntAPPRIS P1 TSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 PSRC1-201ENST00000369903 1710 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 PSRC1-206ENST00000409267 1730 ntAPPRIS P3 TSL 5 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 AZU1-202ENST00000592205 1713 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 NAA38-201ENST00000333775 999 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 PRDX4-202ENST00000379341 1005 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 LYSMD2-202ENST00000454181 1228 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 SUMF1-205ENST00000458465 1102 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 RARRES2P1-201ENST00000474487 481 ntBASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 ERGIC1-206ENST00000519860 1000 ntTSL 3 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 AC104187.1-201ENST00000607510 612 ntBASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 C6orf118-201ENST00000230301 1812 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 GPS1-201ENST00000306823 1842 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 EXOSC3-201ENST00000327304 1806 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 RRP7BP-201ENST00000357802 2375 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 SPHK2-213ENST00000601712 1394 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 FUCA1-201ENST00000374479 2047 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 ZSCAN18-201ENST00000240727 2779 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 C19orf57-208ENST00000591586 1559 ntAPPRIS ALT2 TSL 5 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 AC116351.2-201ENST00000606540 1585 ntBASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 KCNK17-201ENST00000373231 1658 ntAPPRIS P3 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 AC063977.6-201ENST00000600074 1763 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 APOA5-201ENST00000227665 1897 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 CAMKK2-206ENST00000402834 2051 ntAPPRIS P4 TSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 BCL7A-203ENST00000538010 6247 ntTSL 1 (best) BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 AL645608.8-201ENST00000606034 2086 ntBASIC14.93□□□□□ -0.02
TRAV1-1A0A0B4J248 NBL1-210ENST00000615215 2160 ntAPPRIS ALT2 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 ISLR2-201ENST00000361742 4817 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 AC019069.1-201ENST00000610008 1333 ntBASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 FGFR1-203ENST00000341462 6054 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 DBNDD2-203ENST00000372710 1417 ntTSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 DPYSL4-202ENST00000368627 1545 ntTSL 5 BASIC14.92□□□□□ -0.02
TRAV1-1A0A0B4J248 HDAC10-201ENST00000216271 2687 ntAPPRIS P1 TSL 1 (best) BASIC14.92□□□□□ -0.02
Retrieved 100 of 98,524 protein–RNA pairs in 21.1 ms