RNA–Protein interactions for RNA: ENST00000316068.7

MCM9-201, Transcript of minichromosome maintenance 9 homologous recombination repair factor, humanhuman

TSL 1 (best) BASIC

Gene MCM9, Length 2,442 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MCM9-201ENST00000316068 NISCHQ9Y2I1 1504 aa36.93■■■■□ 3.5
MCM9-201ENST00000316068 SHROOM4Q9ULL8 1493 aa31.77■■■□□ 2.68
MCM9-201ENST00000316068 ZCCHC6Q5VYS8 1495 aaKnown RBP31.25■■■□□ 2.59
MCM9-201ENST00000316068 CCDC180Q9P1Z9 1646 aa31.2■■■□□ 2.58
MCM9-201ENST00000316068 SUPT5HO00267 1087 aaKnown RBP31.12■■■□□ 2.57
MCM9-201ENST00000316068 DCAF8L2P0C7V8 631 aa30.76■■■□□ 2.52
MCM9-201ENST00000316068 MYO15BQ96JP2 1530 aa30.29■■■□□ 2.44
MCM9-201ENST00000316068 CHIC1Q5VXU3 224 aa30.25■■■□□ 2.43
MCM9-201ENST00000316068 DCAF1Q9Y4B6 1507 aa30.15■■■□□ 2.42
MCM9-201ENST00000316068 SCRIBQ14160 1630 aa29.5■■■□□ 2.31
MCM9-201ENST00000316068 LOC105371045A0A1W2PR82 267 aa29.49■■■□□ 2.31
MCM9-201ENST00000316068 ABCC9O60706 1549 aa29.48■■■□□ 2.31
MCM9-201ENST00000316068 PCGF6Q9BYE7 350 aa29.4■■■□□ 2.3
MCM9-201ENST00000316068 HRCP23327 699 aa29.35■■■□□ 2.29
MCM9-201ENST00000316068 RSF1Q96T23 1441 aaPredicted RBP29.33■■■□□ 2.29
MCM9-201ENST00000316068 RB1CC1Q8TDY2 1594 aa29.07■■■□□ 2.24
MCM9-201ENST00000316068 PPARGC1BQ86YN6 1023 aaKnown RBP28.99■■■□□ 2.23
MCM9-201ENST00000316068 CECR2Q9BXF3 1484 aa28.97■■■□□ 2.23
MCM9-201ENST00000316068 TRIM41Q8WV44 630 aa28.85■■■□□ 2.21
MCM9-201ENST00000316068 NACADO15069 1562 aa28.85■■■□□ 2.21
MCM9-201ENST00000316068 MROH2BQ7Z745 1585 aa28.82■■■□□ 2.2
MCM9-201ENST00000316068 FAM9AQ8IZU1 332 aaPredicted RBP28.8■■■□□ 2.2
MCM9-201ENST00000316068 EHMT2Q96KQ7 1210 aa28.68■■■□□ 2.18
MCM9-201ENST00000316068 WIZO95785 1651 aa28.66■■■□□ 2.18
MCM9-201ENST00000316068 TRIM26Q12899 539 aaPredicted RBP28.66■■■□□ 2.18
MCM9-201ENST00000316068 BAZ1AQ9NRL2 1556 aaPredicted RBP28.35■■■□□ 2.13
MCM9-201ENST00000316068 EIF4G1Q04637 1599 aaKnown RBP28.28■■■□□ 2.12
MCM9-201ENST00000316068 UNC13AQ9UPW8 1703 aa28.14■■■□□ 2.1
MCM9-201ENST00000316068 SMARCA4P51532 1647 aa28.11■■■□□ 2.09
MCM9-201ENST00000316068 ABCC8Q09428 1581 aa28.1■■■□□ 2.09
MCM9-201ENST00000316068 CCDC88BA6NC98 1476 aa28.07■■■□□ 2.08
MCM9-201ENST00000316068 TOP2AP11388 1531 aaKnown RBP28.07■■■□□ 2.08
MCM9-201ENST00000316068 SMARCA2P51531 1590 aa28■■■□□ 2.07
MCM9-201ENST00000316068 PABPN1Q86U42 306 aaKnown RBP eCLIP27.97■■■□□ 2.07
MCM9-201ENST00000316068 ZEB1P37275 1124 aaPredicted RBP27.87■■■□□ 2.05
MCM9-201ENST00000316068 SOGA1O94964 1423 aa27.85■■■□□ 2.05
MCM9-201ENST00000316068 BICRAQ9NZM4 1560 aa27.81■■■□□ 2.04
MCM9-201ENST00000316068 RUSC2Q8N2Y8 1516 aa27.78■■■□□ 2.04
MCM9-201ENST00000316068 TTBK1Q5TCY1 1321 aaPredicted RBP27.73■■■□□ 2.03
MCM9-201ENST00000316068 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP27.7■■■□□ 2.03
MCM9-201ENST00000316068 CEP162Q5TB80 1403 aa27.64■■■□□ 2.02
MCM9-201ENST00000316068 CSRNP3Q8WYN3 585 aa27.57■■■□□ 2
MCM9-201ENST00000316068 WRNQ14191 1432 aaPredicted RBP eCLIP27.54■■■□□ 2
MCM9-201ENST00000316068 TNIKQ9UKE5 1360 aa27.52■■■□□ 2
MCM9-201ENST00000316068 PEG3Q9GZU2 1588 aa27.49■■□□□ 1.99
MCM9-201ENST00000316068 UBTFP17480 764 aaKnown RBP27.48■■□□□ 1.99
MCM9-201ENST00000316068 CCER1Q8TC90 406 aaPredicted RBP27.47■■□□□ 1.99
MCM9-201ENST00000316068 SYNJ1O43426 1573 aa27.43■■□□□ 1.98
MCM9-201ENST00000316068 ATAD2BQ9ULI0 1458 aa27.4■■□□□ 1.98
MCM9-201ENST00000316068 EEA1Q15075 1411 aa27.4■■□□□ 1.98
MCM9-201ENST00000316068 GOLGA3Q08378 1498 aa27.34■■□□□ 1.97
MCM9-201ENST00000316068 BAZ1BQ9UIG0 1483 aaKnown RBP27.28■■□□□ 1.96
MCM9-201ENST00000316068 SCAF1Q9H7N4 1312 aaKnown RBP27.18■■□□□ 1.94
MCM9-201ENST00000316068 CEP164Q9UPV0 1460 aa27.16■■□□□ 1.94
MCM9-201ENST00000316068 RAPGEF2Q9Y4G8 1499 aa27.13■■□□□ 1.93
MCM9-201ENST00000316068 KIF21BO75037 1637 aa27.12■■□□□ 1.93
MCM9-201ENST00000316068 RANGAP1P46060 587 aaPredicted RBP27.11■■□□□ 1.93
MCM9-201ENST00000316068 CLIP1P30622 1438 aa27.09■■□□□ 1.93
MCM9-201ENST00000316068 HNRNPUL2Q1KMD3 747 aaKnown RBP27■■□□□ 1.91
MCM9-201ENST00000316068 DIEXFQ68CQ4 756 aaKnown RBP26.97■■□□□ 1.91
MCM9-201ENST00000316068 TOP2BQ02880 1626 aa26.97■■□□□ 1.91
MCM9-201ENST00000316068 VPS8Q8N3P4 1428 aa26.96■■□□□ 1.91
MCM9-201ENST00000316068 NEUROD1Q13562 356 aa26.87■■□□□ 1.89
MCM9-201ENST00000316068 BIVM-ERCC5R4GMW8 1640 aa26.84■■□□□ 1.89
MCM9-201ENST00000316068 CUX1P39880 1505 aa26.8■■□□□ 1.88
MCM9-201ENST00000316068 NCAPD3P42695 1498 aa26.79■■□□□ 1.88
MCM9-201ENST00000316068 ACIN1Q9UKV3 1341 aaKnown RBP26.78■■□□□ 1.88
MCM9-201ENST00000316068 PRXQ9BXM0 1461 aa26.77■■□□□ 1.88
MCM9-201ENST00000316068 HMGXB3Q12766 1538 aa26.73■■□□□ 1.87
MCM9-201ENST00000316068 ZNF316A6NFI3 1004 aaPredicted RBP26.73■■□□□ 1.87
MCM9-201ENST00000316068 ARAP1Q96P48 1450 aa26.72■■□□□ 1.87
MCM9-201ENST00000316068 APLP2Q06481 763 aa26.71■■□□□ 1.87
MCM9-201ENST00000316068 KANK4Q5T7N3 995 aaPredicted RBP26.68■■□□□ 1.86
MCM9-201ENST00000316068 ERICH3Q5RHP9 1530 aa26.65■■□□□ 1.86
MCM9-201ENST00000316068 CFTRP13569 1480 aa26.63■■□□□ 1.85
MCM9-201ENST00000316068 KIF27Q86VH2 1401 aa26.56■■□□□ 1.84
MCM9-201ENST00000316068 GTF3C3Q9Y5Q9 886 aa26.54■■□□□ 1.84
MCM9-201ENST00000316068 MIER1Q8N108 512 aa26.5■■□□□ 1.83
MCM9-201ENST00000316068 ARHGAP35Q9NRY4 1499 aa26.47■■□□□ 1.83
MCM9-201ENST00000316068 YTHDC1Q96MU7 727 aaKnown RBP26.46■■□□□ 1.83
MCM9-201ENST00000316068 CENPBP07199 599 aaPredicted RBP26.43■■□□□ 1.82
MCM9-201ENST00000316068 DHX57Q6P158 1386 aaKnown RBP26.43■■□□□ 1.82
MCM9-201ENST00000316068 CUX2O14529 1486 aa26.39■■□□□ 1.81
MCM9-201ENST00000316068 IGF1RP08069 1367 aa26.39■■□□□ 1.81
MCM9-201ENST00000316068 RRBP1Q9P2E9 1410 aaKnown RBP26.34■■□□□ 1.81
MCM9-201ENST00000316068 CADPSQ9ULU8 1353 aa26.32■■□□□ 1.8
MCM9-201ENST00000316068 ITGAEP38570 1179 aa26.29■■□□□ 1.8
MCM9-201ENST00000316068 FGD5Q6ZNL6 1462 aa26.28■■□□□ 1.8
MCM9-201ENST00000316068 PRDM2Q13029 1718 aa26.27■■□□□ 1.8
MCM9-201ENST00000316068 CCNB3Q8WWL7 1395 aa26.23■■□□□ 1.79
MCM9-201ENST00000316068 CARMIL1Q5VZK9 1371 aa26.22■■□□□ 1.79
MCM9-201ENST00000316068 PELP1Q8IZL8 1130 aaKnown RBP26.17■■□□□ 1.78
MCM9-201ENST00000316068 CLSPNQ9HAW4 1339 aa26.17■■□□□ 1.78
MCM9-201ENST00000316068 P3H3Q8IVL6 736 aa26.16■■□□□ 1.78
MCM9-201ENST00000316068 CC2D2AQ9P2K1 1620 aa26.15■■□□□ 1.78
MCM9-201ENST00000316068 TIAM1Q13009 1591 aa26.11■■□□□ 1.77
MCM9-201ENST00000316068 RAD54L2Q9Y4B4 1467 aa26.11■■□□□ 1.77
MCM9-201ENST00000316068 FANCD2Q9BXW9 1451 aa26.09■■□□□ 1.77
MCM9-201ENST00000316068 PHLDB1Q86UU1 1377 aa26.08■■□□□ 1.77
MCM9-201ENST00000316068 RAB3GAP2Q9H2M9 1393 aa26.06■■□□□ 1.76
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms