Protein–RNA interactions for Protein: Q9Y4X3

CCL27, C-C motif chemokine 27, humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CCL27Q9Y4X3 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC24.44■■□□□ 1.5
CCL27Q9Y4X3 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.44■■□□□ 1.5
CCL27Q9Y4X3 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.43■■□□□ 1.5
CCL27Q9Y4X3 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCL27Q9Y4X3 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCL27Q9Y4X3 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCL27Q9Y4X3 EI24-212ENST00000615917 1407 ntTSL 2 BASIC24.43■■□□□ 1.5
CCL27Q9Y4X3 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC24.43■■□□□ 1.5
CCL27Q9Y4X3 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCL27Q9Y4X3 LINC00273-201ENST00000539813 1452 ntBASIC24.42■■□□□ 1.5
CCL27Q9Y4X3 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC24.42■■□□□ 1.5
CCL27Q9Y4X3 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.41■■□□□ 1.5
CCL27Q9Y4X3 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.41■■□□□ 1.5
CCL27Q9Y4X3 MIR3665-201ENST00000578708 105 ntBASIC24.41■■□□□ 1.5
CCL27Q9Y4X3 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCL27Q9Y4X3 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC24.4■■□□□ 1.5
CCL27Q9Y4X3 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC24.4■■□□□ 1.5
CCL27Q9Y4X3 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC24.39■■□□□ 1.49
CCL27Q9Y4X3 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC24.39■■□□□ 1.49
CCL27Q9Y4X3 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCL27Q9Y4X3 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC24.38■■□□□ 1.49
CCL27Q9Y4X3 NRG1-221ENST00000614767 762 ntTSL 5 BASIC24.38■■□□□ 1.49
CCL27Q9Y4X3 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCL27Q9Y4X3 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC24.37■■□□□ 1.49
CCL27Q9Y4X3 AP006261.1-201ENST00000584783 668 ntBASIC24.37■■□□□ 1.49
CCL27Q9Y4X3 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCL27Q9Y4X3 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC24.36■■□□□ 1.49
CCL27Q9Y4X3 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC24.36■■□□□ 1.49
CCL27Q9Y4X3 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.36■■□□□ 1.49
CCL27Q9Y4X3 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC24.36■■□□□ 1.49
CCL27Q9Y4X3 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC24.35■■□□□ 1.49
CCL27Q9Y4X3 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC24.35■■□□□ 1.49
CCL27Q9Y4X3 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC24.35■■□□□ 1.49
CCL27Q9Y4X3 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC24.35■■□□□ 1.49
CCL27Q9Y4X3 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.34■■□□□ 1.49
CCL27Q9Y4X3 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL27Q9Y4X3 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL27Q9Y4X3 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC24.34■■□□□ 1.49
CCL27Q9Y4X3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC24.34■■□□□ 1.49
CCL27Q9Y4X3 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.33■■□□□ 1.49
CCL27Q9Y4X3 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC24.33■■□□□ 1.49
CCL27Q9Y4X3 AC018358.1-201ENST00000631079 1402 ntBASIC24.33■■□□□ 1.49
CCL27Q9Y4X3 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC24.33■■□□□ 1.48
CCL27Q9Y4X3 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC24.32■■□□□ 1.48
CCL27Q9Y4X3 AC087741.3-201ENST00000624270 1347 ntBASIC24.32■■□□□ 1.48
CCL27Q9Y4X3 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC24.31■■□□□ 1.48
CCL27Q9Y4X3 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC24.3■■□□□ 1.48
CCL27Q9Y4X3 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC24.29■■□□□ 1.48
CCL27Q9Y4X3 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC24.29■■□□□ 1.48
CCL27Q9Y4X3 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.29■■□□□ 1.48
CCL27Q9Y4X3 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 CALM3-209ENST00000597743 577 ntTSL 4 BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 RRNAD1-201ENST00000368216 2254 ntAPPRIS P3 TSL 1 (best) BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC24.28■■□□□ 1.48
CCL27Q9Y4X3 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 MTNR1A-201ENST00000307161 1289 ntAPPRIS P1 TSL 1 (best) BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC24.27■■□□□ 1.48
CCL27Q9Y4X3 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC24.26■■□□□ 1.47
CCL27Q9Y4X3 AL162393.1-201ENST00000437852 946 ntBASIC24.26■■□□□ 1.47
CCL27Q9Y4X3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC24.25■■□□□ 1.47
CCL27Q9Y4X3 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.24■■□□□ 1.47
CCL27Q9Y4X3 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC24.24■■□□□ 1.47
CCL27Q9Y4X3 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC24.24■■□□□ 1.47
CCL27Q9Y4X3 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC24.24■■□□□ 1.47
CCL27Q9Y4X3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC24.23■■□□□ 1.47
CCL27Q9Y4X3 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC24.23■■□□□ 1.47
CCL27Q9Y4X3 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC24.22■■□□□ 1.47
CCL27Q9Y4X3 C8orf58-202ENST00000409586 2021 ntAPPRIS ALT2 TSL 2 BASIC24.22■■□□□ 1.47
CCL27Q9Y4X3 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CCL27Q9Y4X3 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC24.21■■□□□ 1.47
CCL27Q9Y4X3 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCL27Q9Y4X3 CIB2-204ENST00000557846 934 ntTSL 3 BASIC24.21■■□□□ 1.47
CCL27Q9Y4X3 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC24.21■■□□□ 1.47
CCL27Q9Y4X3 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC24.21■■□□□ 1.47
CCL27Q9Y4X3 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.47
CCL27Q9Y4X3 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC24.2■■□□□ 1.46
CCL27Q9Y4X3 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC24.2■■□□□ 1.46
CCL27Q9Y4X3 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC24.2■■□□□ 1.46
CCL27Q9Y4X3 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC24.2■■□□□ 1.46
CCL27Q9Y4X3 CREM-210ENST00000374721 2020 ntTSL 5 BASIC24.19■■□□□ 1.46
CCL27Q9Y4X3 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCL27Q9Y4X3 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC24.19■■□□□ 1.46
CCL27Q9Y4X3 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC24.19■■□□□ 1.46
CCL27Q9Y4X3 AC009690.3-201ENST00000569547 1902 ntAPPRIS P1 TSL 2 BASIC24.19■■□□□ 1.46
CCL27Q9Y4X3 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC24.18■■□□□ 1.46
CCL27Q9Y4X3 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.18■■□□□ 1.46
CCL27Q9Y4X3 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC24.18■■□□□ 1.46
Retrieved 100 of 98,524 protein–RNA pairs in 17.6 ms