Protein–RNA interactions for Protein: Q9UPW0

FOXJ3, Forkhead box protein J3, humanhuman

Predictions only

Length 622 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
FOXJ3Q9UPW0 GPS1-204ENST00000392358 2276 ntTSL 1 (best) BASIC22.1■■□□□ 1.13
FOXJ3Q9UPW0 AL391121.1-201ENST00000607967 1349 ntBASIC22.1■■□□□ 1.13
FOXJ3Q9UPW0 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC22.1■■□□□ 1.13
FOXJ3Q9UPW0 GTF2IP1-204ENST00000616377 2632 ntTSL 2 BASIC22.1■■□□□ 1.13
FOXJ3Q9UPW0 CFAP99-207ENST00000635017 2298 ntTSL 5 BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 SKOR2-203ENST00000620245 3048 ntAPPRIS ALT2 TSL 5 BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 MACROD1-201ENST00000255681 1205 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 BCL7C-202ENST00000380317 2409 ntTSL 1 (best) BASIC22.09■■□□□ 1.13
FOXJ3Q9UPW0 PTPA-202ENST00000347048 1989 ntTSL 1 (best) BASIC22.08■■□□□ 1.13
FOXJ3Q9UPW0 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC22.08■■□□□ 1.13
FOXJ3Q9UPW0 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC22.08■■□□□ 1.12
FOXJ3Q9UPW0 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC22.07■■□□□ 1.12
FOXJ3Q9UPW0 AL449106.1-201ENST00000608517 1980 ntBASIC22.07■■□□□ 1.12
FOXJ3Q9UPW0 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC22.07■■□□□ 1.12
FOXJ3Q9UPW0 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC22.07■■□□□ 1.12
FOXJ3Q9UPW0 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC22.07■■□□□ 1.12
FOXJ3Q9UPW0 AP002414.2-202ENST00000590929 1450 ntBASIC22.07■■□□□ 1.12
FOXJ3Q9UPW0 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC22.06■■□□□ 1.12
FOXJ3Q9UPW0 AP002884.3-203ENST00000419895 1711 ntTSL 2 BASIC22.06■■□□□ 1.12
FOXJ3Q9UPW0 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.06■■□□□ 1.12
FOXJ3Q9UPW0 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXJ3Q9UPW0 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXJ3Q9UPW0 CCM2L-201ENST00000262659 2523 ntAPPRIS P1 TSL 1 (best) BASIC22.05■■□□□ 1.12
FOXJ3Q9UPW0 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
FOXJ3Q9UPW0 PKM-203ENST00000389093 2279 ntTSL 5 BASIC22.04■■□□□ 1.12
FOXJ3Q9UPW0 DDX42-201ENST00000359353 2783 ntTSL 5 BASIC22.04■■□□□ 1.12
FOXJ3Q9UPW0 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.04■■□□□ 1.12
FOXJ3Q9UPW0 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXJ3Q9UPW0 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXJ3Q9UPW0 ST6GALNAC6-204ENST00000373144 2406 ntAPPRIS ALT1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXJ3Q9UPW0 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC22.03■■□□□ 1.12
FOXJ3Q9UPW0 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC22.03■■□□□ 1.12
FOXJ3Q9UPW0 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.03■■□□□ 1.12
FOXJ3Q9UPW0 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FOXJ3Q9UPW0 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXJ3Q9UPW0 CCND3-202ENST00000372988 2133 ntTSL 1 (best) BASIC22.02■■□□□ 1.12
FOXJ3Q9UPW0 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.12
FOXJ3Q9UPW0 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.02■■□□□ 1.11
FOXJ3Q9UPW0 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.02■■□□□ 1.11
FOXJ3Q9UPW0 BARX1-201ENST00000253968 1533 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXJ3Q9UPW0 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXJ3Q9UPW0 LMO1-202ENST00000428101 1038 ntAPPRIS ALT1 TSL 1 (best) BASIC22.01■■□□□ 1.11
FOXJ3Q9UPW0 CAHM-201ENST00000604200 896 ntBASIC22.01■■□□□ 1.11
FOXJ3Q9UPW0 MORF4L1-202ENST00000379535 2274 ntTSL 2 BASIC22.01■■□□□ 1.11
FOXJ3Q9UPW0 MNX1-207ENST00000543409 1620 ntAPPRIS ALT2 TSL 1 (best) BASIC22■■□□□ 1.11
FOXJ3Q9UPW0 CGGBP1-206ENST00000482016 1147 ntAPPRIS P1 TSL 2 BASIC22■■□□□ 1.11
FOXJ3Q9UPW0 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC22■■□□□ 1.11
FOXJ3Q9UPW0 AC006486.1-201ENST00000594664 634 ntAPPRIS P1 TSL 3 BASIC22■■□□□ 1.11
FOXJ3Q9UPW0 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXJ3Q9UPW0 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXJ3Q9UPW0 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC21.99■■□□□ 1.11
FOXJ3Q9UPW0 SPIRE1-203ENST00000410092 5533 ntAPPRIS P3 TSL 1 (best) BASIC21.99■■□□□ 1.11
FOXJ3Q9UPW0 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXJ3Q9UPW0 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXJ3Q9UPW0 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC21.98■■□□□ 1.11
FOXJ3Q9UPW0 HOPX-206ENST00000503639 1248 ntAPPRIS P1 TSL 1 (best) BASIC21.98■■□□□ 1.11
FOXJ3Q9UPW0 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXJ3Q9UPW0 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC21.97■■□□□ 1.11
FOXJ3Q9UPW0 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXJ3Q9UPW0 PACS2-201ENST00000325438 3708 ntAPPRIS P1 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXJ3Q9UPW0 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXJ3Q9UPW0 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC21.96■■□□□ 1.11
FOXJ3Q9UPW0 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC21.96■■□□□ 1.11
FOXJ3Q9UPW0 ZNF692-201ENST00000306601 1931 ntAPPRIS P3 TSL 1 (best) BASIC21.96■■□□□ 1.11
FOXJ3Q9UPW0 RPS2P35-201ENST00000443417 897 ntBASIC21.95■■□□□ 1.1
FOXJ3Q9UPW0 MEST-211ENST00000437945 1455 ntTSL 5 BASIC21.95■■□□□ 1.1
FOXJ3Q9UPW0 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.95■■□□□ 1.1
FOXJ3Q9UPW0 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXJ3Q9UPW0 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXJ3Q9UPW0 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC21.94■■□□□ 1.1
FOXJ3Q9UPW0 PARD6A-202ENST00000458121 1260 ntAPPRIS ALT1 TSL 1 (best) BASIC21.93■■□□□ 1.1
FOXJ3Q9UPW0 LANCL3-203ENST00000614025 1469 ntTSL 2 BASIC21.93■■□□□ 1.1
FOXJ3Q9UPW0 RUNX2-203ENST00000371436 1588 ntAPPRIS ALT2 TSL 5 BASIC21.92■■□□□ 1.1
FOXJ3Q9UPW0 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXJ3Q9UPW0 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXJ3Q9UPW0 PRKAR1B-203ENST00000403562 1917 ntAPPRIS P1 TSL 1 (best) BASIC21.92■■□□□ 1.1
FOXJ3Q9UPW0 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.92■■□□□ 1.1
FOXJ3Q9UPW0 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXJ3Q9UPW0 MISP3-201ENST00000269720 1424 ntAPPRIS ALT2 TSL 5 BASIC21.91■■□□□ 1.1
FOXJ3Q9UPW0 AC018358.1-201ENST00000631079 1402 ntBASIC21.91■■□□□ 1.1
FOXJ3Q9UPW0 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXJ3Q9UPW0 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.91■■□□□ 1.1
FOXJ3Q9UPW0 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC21.91■■□□□ 1.1
FOXJ3Q9UPW0 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 CDPF1-201ENST00000314567 1875 ntAPPRIS P2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 UNCX-201ENST00000316333 2048 ntAPPRIS P1 TSL 1 (best) BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 TOP1MT-208ENST00000519148 1868 ntTSL 2 BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC21.9■■□□□ 1.1
FOXJ3Q9UPW0 DNMT3A-206ENST00000406659 1775 ntTSL 1 (best) BASIC21.89■■□□□ 1.1
FOXJ3Q9UPW0 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXJ3Q9UPW0 ZDHHC16-207ENST00000393760 2014 ntAPPRIS P4 TSL 1 (best) BASIC21.89■■□□□ 1.1
FOXJ3Q9UPW0 DAZAP1-202ENST00000336761 2290 ntTSL 5 BASIC21.89■■□□□ 1.09
FOXJ3Q9UPW0 GSC2-201ENST00000086933 1033 ntAPPRIS P1 TSL 5 BASIC21.89■■□□□ 1.09
FOXJ3Q9UPW0 MAGI2-211ENST00000535697 6146 ntTSL 5 BASIC21.89■■□□□ 1.09
FOXJ3Q9UPW0 NXPH4-201ENST00000349394 1804 ntAPPRIS P1 TSL 1 (best) BASIC21.89■■□□□ 1.09
Retrieved 100 of 98,524 protein–RNA pairs in 10.5 ms