Protein–RNA interactions for Protein: Q9P287

BCCIP, BRCA2 and CDKN1A-interacting protein, humanhuman

Known RBP eCLIP

Length 314 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
BCCIPQ9P287 TRIO-221ENST00000513206 7995 ntTSL 518.42■□□□□ 0.547e-7■■■□□ 15.9
BCCIPQ9P287 TRIO-218ENST00000512070 8907 ntTSL 216.61■□□□□ 0.257e-7■■■□□ 15.9
BCCIPQ9P287 TRIO-222ENST00000515144 7455 ntTSL 1 (best)16.5■□□□□ 0.237e-7■■■□□ 15.9
BCCIPQ9P287 TRIO-202ENST00000344204 11100 ntAPPRIS P1 TSL 1 (best) BASIC15.78■□□□□ 0.127e-7■■■□□ 15.9
BCCIPQ9P287 TRIO-213ENST00000509354 801 ntTSL 27.47□□□□□ -1.217e-7■■■□□ 15.9
BCCIPQ9P287 ANKRD11-211ENST00000566973 442 ntTSL 221.79■■□□□ 1.081e-6■■■□□ 15.9
BCCIPQ9P287 IGF2BP3-213ENST00000491719 800 ntTSL 521.81■■□□□ 1.082e-6■■■□□ 15.9
BCCIPQ9P287 IGF2BP3-207ENST00000468263 706 ntTSL 217.68■□□□□ 0.422e-6■■■□□ 15.9
BCCIPQ9P287 IGF2BP3-210ENST00000476938 500 ntTSL 216.67■□□□□ 0.262e-6■■■□□ 15.9
BCCIPQ9P287 IGF2BP3-206ENST00000468005 2948 ntTSL 515.44■□□□□ 0.062e-6■■■□□ 15.9
BCCIPQ9P287 IGF2BP3-202ENST00000421467 2988 ntTSL 512.57□□□□□ -0.42e-6■■■□□ 15.9
BCCIPQ9P287 IGF2BP3-201ENST00000258729 4250 ntAPPRIS P1 TSL 1 (best) BASIC7.52□□□□□ -1.212e-6■■■□□ 15.9
BCCIPQ9P287 ACSM3-203ENST00000501740 839 ntTSL 514.94□□□□□ -0.028e-7■■■□□ 15.8
BCCIPQ9P287 ACSM3-213ENST00000568235 558 ntTSL 412.89□□□□□ -0.358e-7■■■□□ 15.8
BCCIPQ9P287 ACSM3-205ENST00000561584 561 ntTSL 412.47□□□□□ -0.418e-7■■■□□ 15.8
BCCIPQ9P287 AC004381.2-201ENST00000637768 1329 ntBASIC10.03□□□□□ -0.88e-7■■■□□ 15.8
BCCIPQ9P287 SLC38A1-207ENST00000549633 1076 ntTSL 1 (best)22.41■■□□□ 1.188e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-208ENST00000550173 891 ntTSL 520.98■□□□□ 0.958e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-209ENST00000551506 586 ntTSL 318.75■□□□□ 0.598e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-204ENST00000546893 2332 ntAPPRIS P1 TSL 1 (best) BASIC16.11■□□□□ 0.178e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-202ENST00000439706 3436 ntAPPRIS P1 TSL 1 (best) BASIC13.93□□□□□ -0.188e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-206ENST00000549049 3196 ntAPPRIS P1 TSL 1 (best) BASIC13.69□□□□□ -0.228e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-201ENST00000398637 8066 ntAPPRIS P1 TSL 1 (best) BASIC13.14□□□□□ -0.318e-9■■■□□ 15.8
BCCIPQ9P287 SLC38A1-210ENST00000552197 2599 ntTSL 1 (best) BASIC11.3□□□□□ -0.68e-9■■■□□ 15.8
BCCIPQ9P287 BIRC6-201ENST00000421745 15703 ntAPPRIS P1 TSL 1 (best) BASIC8.49□□□□□ -1.053e-7■■■□□ 15.8
BCCIPQ9P287 EP400-203ENST00000333577 3092 ntTSL 1 (best) BASIC16.68■□□□□ 0.261e-6■■■□□ 15.7
BCCIPQ9P287 EP400-204ENST00000389561 12317 ntAPPRIS P1 TSL 5 BASIC10.87□□□□□ -0.671e-6■■■□□ 15.7
BCCIPQ9P287 EP400-205ENST00000389562 12836 ntAPPRIS P1 TSL 1 (best) BASIC10.39□□□□□ -0.751e-6■■■□□ 15.7
BCCIPQ9P287 ANKRD11-217ENST00000613312 1584 ntAPPRIS ALT2 TSL 5 BASIC22.17■■□□□ 1.141e-6■■■□□ 15.7
BCCIPQ9P287 ANKRD11-204ENST00000378332 1982 ntTSL 221.74■■□□□ 1.071e-6■■■□□ 15.7
BCCIPQ9P287 ANKRD11-203ENST00000378330 9132 ntAPPRIS P2 TSL 1 (best) BASIC15.9■□□□□ 0.141e-6■■■□□ 15.7
BCCIPQ9P287 ANKRD11-201ENST00000301030 9301 ntAPPRIS P2 TSL 5 BASIC15.41■□□□□ 0.061e-6■■■□□ 15.7
BCCIPQ9P287 HNRNPM-202ENST00000348943 2568 ntAPPRIS ALT2 TSL 1 (best) BASIC23.31■■□□□ 1.323e-7■■■□□ 15.6
BCCIPQ9P287 HNRNPM-208ENST00000597270 1147 ntTSL 221.48■■□□□ 1.033e-7■■■□□ 15.6
BCCIPQ9P287 HNRNPM-204ENST00000594907 1078 ntTSL 520.13■□□□□ 0.813e-7■■■□□ 15.6
BCCIPQ9P287 HNRNPM-201ENST00000325495 2494 ntAPPRIS P4 TSL 1 (best) BASIC19.96■□□□□ 0.793e-7■■■□□ 15.6
BCCIPQ9P287 HNRNPM-214ENST00000600806 2373 ntTSL 519.54■□□□□ 0.723e-7■■■□□ 15.6
BCCIPQ9P287 HNRNPM-213ENST00000600092 1086 ntTSL 219.35■□□□□ 0.693e-7■■■□□ 15.6
BCCIPQ9P287 HNRNPM-217ENST00000620401 2458 ntAPPRIS ALT2 TSL 1 (best) BASIC18.79■□□□□ 0.63e-7■■■□□ 15.6
BCCIPQ9P287 ANKRD11-207ENST00000562816 573 ntTSL 412.14□□□□□ -0.471e-6■■■□□ 15.6
BCCIPQ9P287 CCNY-202ENST00000339497 4630 ntTSL 1 (best) BASIC18.1■□□□□ 0.491e-6■■■□□ 15.5
BCCIPQ9P287 CCNY-209ENST00000493157 816 ntTSL 517.74■□□□□ 0.431e-6■■■□□ 15.5
BCCIPQ9P287 CCNY-201ENST00000265375 4768 ntAPPRIS ALT1 TSL 1 (best) BASIC16.91■□□□□ 0.31e-6■■■□□ 15.5
BCCIPQ9P287 CCNY-207ENST00000490012 793 ntTSL 316.61■□□□□ 0.251e-6■■■□□ 15.5
BCCIPQ9P287 CCNY-203ENST00000374704 3960 ntAPPRIS P4 TSL 1 (best) BASIC15□□□□□ -0.011e-6■■■□□ 15.5
BCCIPQ9P287 CCNY-204ENST00000374706 3940 ntAPPRIS ALT1 TSL 1 (best) BASIC11.28□□□□□ -0.61e-6■■■□□ 15.5
BCCIPQ9P287 CCNY-208ENST00000492478 809 ntTSL 58.99□□□□□ -0.971e-6■■■□□ 15.5
BCCIPQ9P287 ANKRD11-215ENST00000568512 294 ntTSL 29.22□□□□□ -0.931e-6■■■□□ 15.5
BCCIPQ9P287 PTPRN2-204ENST00000404321 1374 ntTSL 5 BASIC18.88■□□□□ 0.612e-6■■■□□ 15.5
BCCIPQ9P287 FOXP1-207ENST00000471386 299 ntTSL 1 (best)26.52■■□□□ 1.841e-8■■■□□ 15.4
BCCIPQ9P287 FOXP1-217ENST00000498154 535 ntTSL 325.63■■□□□ 1.691e-8■■■□□ 15.4
BCCIPQ9P287 FOXP1-201ENST00000318779 843 ntTSL 1 (best) BASIC24.54■■□□□ 1.521e-8■■■□□ 15.4
BCCIPQ9P287 FOXP1-214ENST00000493089 2703 ntAPPRIS ALT1 TSL 2 BASIC19.56■□□□□ 0.721e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-220ENST00000529751 557 ntTSL 418.37■□□□□ 0.531e-8■■■□□ 15.4
BCCIPQ9P287 FOXP1-202ENST00000318789 7114 ntAPPRIS P3 TSL 1 (best) BASIC16.17■□□□□ 0.181e-8■■■□□ 15.4
BCCIPQ9P287 FOXP1-222ENST00000615603 7140 ntTSL 5 BASIC16.17■□□□□ 0.181e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-202ENST00000388854 4277 ntTSL 5 BASIC14.33□□□□□ -0.121e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-214ENST00000526691 3974 ntTSL 1 (best) BASIC14.26□□□□□ -0.131e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-201ENST00000354940 4082 ntAPPRIS ALT1 TSL 5 BASIC14.02□□□□□ -0.161e-8■■■□□ 15.4
BCCIPQ9P287 FOXP1-209ENST00000475937 4967 ntAPPRIS P3 TSL 1 (best) BASIC12.21□□□□□ -0.451e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-223ENST00000531691 728 ntTSL 212.08□□□□□ -0.481e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-211ENST00000526266 577 ntTSL 410.82□□□□□ -0.681e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-219ENST00000529546 2018 ntTSL 2 BASIC10.63□□□□□ -0.711e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-204ENST00000429002 3855 ntTSL 5 BASIC9.75□□□□□ -0.851e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-213ENST00000526580 400 ntTSL 1 (best)9.48□□□□□ -0.891e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-222ENST00000531689 554 ntTSL 49.47□□□□□ -0.891e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-208ENST00000525566 3836 ntTSL 1 (best) BASIC9.41□□□□□ -0.91e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-218ENST00000528079 629 ntTSL 48.86□□□□□ -0.991e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-205ENST00000503506 3930 ntAPPRIS P2 TSL 1 (best) BASIC7.84□□□□□ -1.161e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-210ENST00000526207 551 ntTSL 1 (best)7.78□□□□□ -1.161e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-212ENST00000526390 3808 ntTSL 5 BASIC7.42□□□□□ -1.221e-8■■■□□ 15.4
BCCIPQ9P287 TXNRD1-203ENST00000397736 3832 ntTSL 5 BASIC7.09□□□□□ -1.271e-8■■■□□ 15.4
BCCIPQ9P287 LRMDA-215ENST00000611255 1040 ntAPPRIS ALT2 TSL 5 BASIC23.97■■□□□ 1.433e-7■■■□□ 15.3
BCCIPQ9P287 TAF4-201ENST00000252996 4628 ntAPPRIS P1 TSL 1 (best) BASIC23■■□□□ 1.273e-6■■■□□ 15.3
BCCIPQ9P287 TAF4-207ENST00000608887 284 ntTSL 410.11□□□□□ -0.793e-6■■■□□ 15.3
BCCIPQ9P287 ATXN1-202ENST00000436367 10587 ntAPPRIS P1 TSL 1 (best) BASIC11.16□□□□□ -0.622e-6■■■□□ 15.2
BCCIPQ9P287 ATXN1-201ENST00000244769 10602 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.792e-6■■■□□ 15.2
BCCIPQ9P287 ATXN1-206ENST00000483591 892 ntTSL 1 (best)8.53□□□□□ -1.042e-6■■■□□ 15.2
BCCIPQ9P287 ATXN1-204ENST00000473388 1569 ntTSL 1 (best)7.95□□□□□ -1.142e-6■■■□□ 15.2
BCCIPQ9P287 ATXN1-207ENST00000483954 744 ntTSL 35.81□□□□□ -1.482e-6■■■□□ 15.2
BCCIPQ9P287 ATXN1-209ENST00000495178 853 ntTSL 1 (best)2.16□□□□□ -2.062e-6■■■□□ 15.2
BCCIPQ9P287 SCARNA9-201ENST00000530422 353 ntBASIC11.73□□□□□ -0.531e-12■■■□□ 15.2
BCCIPQ9P287 CEP295-206ENST00000531700 2890 ntAPPRIS ALT2 TSL 2 BASIC5.74□□□□□ -1.491e-12■■■□□ 15.2
BCCIPQ9P287 CEP295-201ENST00000325212 8057 ntAPPRIS P2 TSL 2 BASIC4.41□□□□□ -1.71e-12■■■□□ 15.2
BCCIPQ9P287 CEP295-203ENST00000530425 1735 ntAPPRIS ALT2 TSL 43.81□□□□□ -1.81e-12■■■□□ 15.2
BCCIPQ9P287 AC003006.1-201ENST00000599221 421 ntTSL 314.62□□□□□ -0.077e-6■■■□□ 15.1
BCCIPQ9P287 ZNF551-203ENST00000599402 593 ntTSL 1 (best)14.41□□□□□ -0.17e-6■■■□□ 15.1
BCCIPQ9P287 AC003006.1-202ENST00000594684 612 ntAPPRIS P1 TSL 1 (best) BASIC14.2□□□□□ -0.147e-6■■■□□ 15.1
BCCIPQ9P287 ZNF551-202ENST00000596085 469 ntTSL 2 BASIC12.5□□□□□ -0.417e-6■■■□□ 15.1
BCCIPQ9P287 ZNF551-201ENST00000282296 4564 ntAPPRIS P1 TSL 1 (best) BASIC11.25□□□□□ -0.617e-6■■■□□ 15.1
BCCIPQ9P287 ZNF551-204ENST00000601064 1826 ntTSL 1 (best)10.49□□□□□ -0.737e-6■■■□□ 15.1
BCCIPQ9P287 EHBP1-204ENST00000405482 1311 ntTSL 223.49■■□□□ 1.357e-7■■■□□ 15
BCCIPQ9P287 EHBP1-209ENST00000431489 5076 ntAPPRIS ALT2 TSL 1 (best) BASIC22.18■■□□□ 1.147e-7■■■□□ 15
BCCIPQ9P287 EHBP1-201ENST00000263991 5165 ntAPPRIS P3 TSL 1 (best) BASIC11.14□□□□□ -0.637e-7■■■□□ 15
BCCIPQ9P287 EHBP1-205ENST00000413434 533 ntTSL 49.94□□□□□ -0.827e-7■■■□□ 15
BCCIPQ9P287 EHBP1-217ENST00000472809 1374 ntTSL 59.65□□□□□ -0.867e-7■■■□□ 15
BCCIPQ9P287 EHBP1-211ENST00000449820 539 ntTSL 59.18□□□□□ -0.947e-7■■■□□ 15
BCCIPQ9P287 EHBP1-203ENST00000405289 3591 ntTSL 1 (best) BASIC8.65□□□□□ -1.027e-7■■■□□ 15
BCCIPQ9P287 EHBP1-207ENST00000426940 586 ntTSL 48.41□□□□□ -1.067e-7■■■□□ 15
BCCIPQ9P287 EHBP1-202ENST00000405015 4108 ntAPPRIS ALT2 TSL 2 BASIC6.08□□□□□ -1.447e-7■■■□□ 15
Retrieved 100 of 1,347 protein–RNA pairs in 23.5 ms