RNA–Protein interactions for RNA: ENST00000526207.1

TXNRD1-210, Transcript of thioredoxin reductase 1, humanhuman

TSL 1 (best)

Gene TXNRD1, Length 551 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TXNRD1-210ENST00000526207 AEBP2Q6ZN18 517 aaPredicted RBP24.31■■□□□ 1.48
TXNRD1-210ENST00000526207 CHIC1Q5VXU3 224 aa22.72■■□□□ 1.23
TXNRD1-210ENST00000526207 SENP3Q9H4L4 574 aaPredicted RBP20.72■□□□□ 0.91
TXNRD1-210ENST00000526207 PHF23Q9BUL5 403 aaPredicted RBP20.4■□□□□ 0.86
TXNRD1-210ENST00000526207 FOXD1Q16676 465 aa19.39■□□□□ 0.69
TXNRD1-210ENST00000526207 NISCHQ9Y2I1 1504 aa18.83■□□□□ 0.6
TXNRD1-210ENST00000526207 POTEDQ86YR6 584 aa18.4■□□□□ 0.54
TXNRD1-210ENST00000526207 MSH5O43196 834 aa18.22■□□□□ 0.51
TXNRD1-210ENST00000526207 PIAS4Q8N2W9 510 aaPredicted RBP18.02■□□□□ 0.48
TXNRD1-210ENST00000526207 PLPPR3Q6T4P5 718 aa17.97■□□□□ 0.47
TXNRD1-210ENST00000526207 PPP6R1Q9UPN7 881 aa17.89■□□□□ 0.45
TXNRD1-210ENST00000526207 ADRA2BP18089 450 aa17.79■□□□□ 0.44
TXNRD1-210ENST00000526207 ABCC9O60706 1549 aa17.47■□□□□ 0.39
TXNRD1-210ENST00000526207 CCDC180Q9P1Z9 1646 aa17.11■□□□□ 0.33
TXNRD1-210ENST00000526207 DNAJC5BQ9UF47 199 aa16.75■□□□□ 0.27
TXNRD1-210ENST00000526207 MAPK8IP2Q13387 824 aaPredicted RBP16.44■□□□□ 0.22
TXNRD1-210ENST00000526207 RB1CC1Q8TDY2 1594 aa16.42■□□□□ 0.22
TXNRD1-210ENST00000526207 DMRT2Q9Y5R5 561 aa16.4■□□□□ 0.22
TXNRD1-210ENST00000526207 UNC13AQ9UPW8 1703 aa16.24■□□□□ 0.19
TXNRD1-210ENST00000526207 NACADO15069 1562 aa16.19■□□□□ 0.18
TXNRD1-210ENST00000526207 SCAF1Q9H7N4 1312 aaKnown RBP16.18■□□□□ 0.18
TXNRD1-210ENST00000526207 PABPN1Q86U42 306 aaKnown RBP eCLIP16.16■□□□□ 0.18
TXNRD1-210ENST00000526207 BICRAQ9NZM4 1560 aa16.06■□□□□ 0.16
TXNRD1-210ENST00000526207 DCAF8L2P0C7V8 631 aa15.97■□□□□ 0.15
TXNRD1-210ENST00000526207 CACNB1Q02641 598 aaPredicted RBP15.83■□□□□ 0.12
TXNRD1-210ENST00000526207 MYO15BQ96JP2 1530 aa15.81■□□□□ 0.12
TXNRD1-210ENST00000526207 CC2D2AQ9P2K1 1620 aa15.79■□□□□ 0.12
TXNRD1-210ENST00000526207 CECR2Q9BXF3 1484 aa15.74■□□□□ 0.11
TXNRD1-210ENST00000526207 PPP4R3CPQ6ZMV5 832 aa15.72■□□□□ 0.11
TXNRD1-210ENST00000526207 DCAF8L1A6NGE4 600 aa15.7■□□□□ 0.1
TXNRD1-210ENST00000526207 HOXD11P31277 338 aaPredicted RBP15.66■□□□□ 0.1
TXNRD1-210ENST00000526207 EIF4G1Q04637 1599 aaKnown RBP15.64■□□□□ 0.09
TXNRD1-210ENST00000526207 SHROOM4Q9ULL8 1493 aa15.64■□□□□ 0.09
TXNRD1-210ENST00000526207 SCRIBQ14160 1630 aa15.6■□□□□ 0.09
TXNRD1-210ENST00000526207 RNF39Q9H2S5 420 aa15.56■□□□□ 0.08
TXNRD1-210ENST00000526207 DNAJC5Q9H3Z4 198 aa15.56■□□□□ 0.08
TXNRD1-210ENST00000526207 ZCCHC6Q5VYS8 1495 aaKnown RBP15.53■□□□□ 0.08
TXNRD1-210ENST00000526207 CNKSR2Q8WXI2 1034 aa15.49■□□□□ 0.07
TXNRD1-210ENST00000526207 DCAF1Q9Y4B6 1507 aa15.48■□□□□ 0.07
TXNRD1-210ENST00000526207 RNF216Q9NWF9 866 aaPredicted RBP15.44■□□□□ 0.06
TXNRD1-210ENST00000526207 C1QBPQ07021 282 aaKnown RBP15.27■□□□□ 0.04
TXNRD1-210ENST00000526207 CUX2O14529 1486 aa15.14■□□□□ 0.01
TXNRD1-210ENST00000526207 ERCC6Q03468 1493 aa15.04■□□□□ -0
TXNRD1-210ENST00000526207 NCBP3Q53F19 620 aaKnown RBP14.95□□□□□ -0.02
TXNRD1-210ENST00000526207 NESP48681 1621 aa14.94□□□□□ -0.02
TXNRD1-210ENST00000526207 NCAPD3P42695 1498 aa14.94□□□□□ -0.02
TXNRD1-210ENST00000526207 THOC2Q8NI27 1593 aaKnown RBP14.89□□□□□ -0.03
TXNRD1-210ENST00000526207 GRWD1Q9BQ67 446 aaKnown RBP eCLIP14.87□□□□□ -0.032e-6■□□□□ 8.6
TXNRD1-210ENST00000526207 ATAD2BQ9ULI0 1458 aa14.87□□□□□ -0.03
TXNRD1-210ENST00000526207 HMGXB3Q12766 1538 aa14.83□□□□□ -0.04
TXNRD1-210ENST00000526207 NPM3O75607 178 aaKnown RBP14.83□□□□□ -0.04
TXNRD1-210ENST00000526207 SMARCA4P51532 1647 aa14.82□□□□□ -0.04
TXNRD1-210ENST00000526207 KIF21AQ7Z4S6 1674 aa14.79□□□□□ -0.04
TXNRD1-210ENST00000526207 SMARCA2P51531 1590 aa14.78□□□□□ -0.04
TXNRD1-210ENST00000526207 TRIM41Q8WV44 630 aa14.75□□□□□ -0.05
TXNRD1-210ENST00000526207 LAMC3Q9Y6N6 1575 aa14.7□□□□□ -0.06
TXNRD1-210ENST00000526207 BAZ1BQ9UIG0 1483 aaKnown RBP14.69□□□□□ -0.06
TXNRD1-210ENST00000526207 PEG3Q9GZU2 1588 aa14.64□□□□□ -0.07
TXNRD1-210ENST00000526207 BAZ1AQ9NRL2 1556 aaPredicted RBP14.62□□□□□ -0.07
TXNRD1-210ENST00000526207 U3KPZ7 1027 aaPredicted RBP14.6□□□□□ -0.07
TXNRD1-210ENST00000526207 PDS5BQ9NTI5 1447 aa14.55□□□□□ -0.08
TXNRD1-210ENST00000526207 MROH2BQ7Z745 1585 aa14.55□□□□□ -0.08
TXNRD1-210ENST00000526207 WDR62O43379 1518 aa14.53□□□□□ -0.08
TXNRD1-210ENST00000526207 MRC2Q9UBG0 1479 aa14.52□□□□□ -0.08
TXNRD1-210ENST00000526207 SPINK5Q9NQ38 1064 aaPredicted RBP14.48□□□□□ -0.09
TXNRD1-210ENST00000526207 DSG3P32926 999 aa14.46□□□□□ -0.09
TXNRD1-210ENST00000526207 CADPSQ9ULU8 1353 aa14.45□□□□□ -0.1
TXNRD1-210ENST00000526207 CAPN15O75808 1086 aa14.42□□□□□ -0.1
TXNRD1-210ENST00000526207 WIZO95785 1651 aa14.4□□□□□ -0.1
TXNRD1-210ENST00000526207 CEP164Q9UPV0 1460 aa14.38□□□□□ -0.11
TXNRD1-210ENST00000526207 RIMBP3CA6NJZ7 1639 aa14.36□□□□□ -0.11
TXNRD1-210ENST00000526207 RIMBP3BA6NNM3 1639 aa14.36□□□□□ -0.11
TXNRD1-210ENST00000526207 RIMBP3Q9UFD9 1639 aa14.36□□□□□ -0.11
TXNRD1-210ENST00000526207 POTEHQ6S545 545 aa14.34□□□□□ -0.11
TXNRD1-210ENST00000526207 FANCD2Q9BXW9 1451 aa14.33□□□□□ -0.12
TXNRD1-210ENST00000526207 OSCARQ8IYS5 282 aa14.32□□□□□ -0.12
TXNRD1-210ENST00000526207 URB2Q14146 1524 aaKnown RBP14.29□□□□□ -0.12
TXNRD1-210ENST00000526207 SLC4A2P04920 1241 aa14.26□□□□□ -0.13
TXNRD1-210ENST00000526207 KCNA4P22459 653 aa14.25□□□□□ -0.13
TXNRD1-210ENST00000526207 CFTRP13569 1480 aa14.24□□□□□ -0.13
TXNRD1-210ENST00000526207 ARHGEF11O15085 1522 aa14.22□□□□□ -0.13
TXNRD1-210ENST00000526207 PRDM2Q13029 1718 aa14.2□□□□□ -0.14
TXNRD1-210ENST00000526207 ZNF608Q9ULD9 1512 aaPredicted RBP14.18□□□□□ -0.14
TXNRD1-210ENST00000526207 CHD1O14646 1710 aa14.13□□□□□ -0.15
TXNRD1-210ENST00000526207 TOP2AP11388 1531 aaKnown RBP14.12□□□□□ -0.15
TXNRD1-210ENST00000526207 EIF4G3O43432 1585 aaKnown RBP14.11□□□□□ -0.15
TXNRD1-210ENST00000526207 TRHP20396 242 aaPredicted RBP14.11□□□□□ -0.15
TXNRD1-210ENST00000526207 ABCB7O75027 752 aa14.1□□□□□ -0.15
TXNRD1-210ENST00000526207 IFT140Q96RY7 1462 aa14.08□□□□□ -0.16
TXNRD1-210ENST00000526207 ARAP1Q96P48 1450 aa14.07□□□□□ -0.16
TXNRD1-210ENST00000526207 ZNF219Q9P2Y4 722 aaPredicted RBP14.07□□□□□ -0.16
TXNRD1-210ENST00000526207 CYB5RLQ6IPT4 315 aa14.06□□□□□ -0.16
TXNRD1-210ENST00000526207 APLP2Q06481 763 aa14.05□□□□□ -0.16
TXNRD1-210ENST00000526207 RSF1Q96T23 1441 aaPredicted RBP14.05□□□□□ -0.16
TXNRD1-210ENST00000526207 TOPBP1Q92547 1522 aa14.04□□□□□ -0.16
TXNRD1-210ENST00000526207 TARBP1Q13395 1621 aaKnown RBP14□□□□□ -0.17
TXNRD1-210ENST00000526207 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.97□□□□□ -0.17
TXNRD1-210ENST00000526207 HNRNPUL2Q1KMD3 747 aaKnown RBP13.97□□□□□ -0.17
TXNRD1-210ENST00000526207 AQRO60306 1485 aaKnown RBP eCLIP13.96□□□□□ -0.173e-9■■■■■ 40.7
TXNRD1-210ENST00000526207 DNMBPQ6XZF7 1577 aa13.96□□□□□ -0.18
Retrieved 100 of 20,778 RNA–protein pairs in 28.1 ms