RNA–Protein interactions for RNA: ENST00000436367.5

ATXN1-202, Transcript of ataxin 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene ATXN1, Length 10,587 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN1-202ENST00000436367 NISCHQ9Y2I1 1504 aa16.89■□□□□ 0.29
ATXN1-202ENST00000436367 DCAF8L2P0C7V8 631 aa16.14■□□□□ 0.17
ATXN1-202ENST00000436367 SUPT5HO00267 1087 aaKnown RBP15.34■□□□□ 0.05
ATXN1-202ENST00000436367 SHROOM4Q9ULL8 1493 aa15.28■□□□□ 0.04
ATXN1-202ENST00000436367 PELP1Q8IZL8 1130 aaKnown RBP15.08■□□□□ 0.01
ATXN1-202ENST00000436367 FAM9AQ8IZU1 332 aaPredicted RBP14.69□□□□□ -0.06
ATXN1-202ENST00000436367 APLP2Q06481 763 aa14.68□□□□□ -0.06
ATXN1-202ENST00000436367 ERICH6Q7L0X2 663 aa14.5□□□□□ -0.09
ATXN1-202ENST00000436367 CCDC180Q9P1Z9 1646 aa14.49□□□□□ -0.09
ATXN1-202ENST00000436367 TRIM41Q8WV44 630 aa14.44□□□□□ -0.1
ATXN1-202ENST00000436367 EHMT2Q96KQ7 1210 aa14.42□□□□□ -0.1
ATXN1-202ENST00000436367 MYT1Q01538 1121 aa14.35□□□□□ -0.11
ATXN1-202ENST00000436367 CCER1Q8TC90 406 aaPredicted RBP14.31□□□□□ -0.12
ATXN1-202ENST00000436367 ZEB1P37275 1124 aaPredicted RBP14.24□□□□□ -0.13
ATXN1-202ENST00000436367 ABCC9O60706 1549 aa14.18□□□□□ -0.14
ATXN1-202ENST00000436367 UBTFP17480 764 aaKnown RBP14.16□□□□□ -0.14
ATXN1-202ENST00000436367 PCGF6Q9BYE7 350 aa14.13□□□□□ -0.15
ATXN1-202ENST00000436367 ZCCHC6Q5VYS8 1495 aaKnown RBP14.07□□□□□ -0.16
ATXN1-202ENST00000436367 CENPBP07199 599 aaPredicted RBP14.06□□□□□ -0.16
ATXN1-202ENST00000436367 TTBK1Q5TCY1 1321 aaPredicted RBP13.99□□□□□ -0.17
ATXN1-202ENST00000436367 RANGAP1P46060 587 aaPredicted RBP13.99□□□□□ -0.17
ATXN1-202ENST00000436367 YTHDC1Q96MU7 727 aaKnown RBP13.95□□□□□ -0.18
ATXN1-202ENST00000436367 ATP1B4Q9UN42 357 aaPredicted RBP13.94□□□□□ -0.18
ATXN1-202ENST00000436367 SCRIBQ14160 1630 aa13.91□□□□□ -0.18
ATXN1-202ENST00000436367 CHIC1Q5VXU3 224 aa13.88□□□□□ -0.19
ATXN1-202ENST00000436367 NEFLP07196 543 aa13.86□□□□□ -0.19
ATXN1-202ENST00000436367 TRIM26Q12899 539 aaPredicted RBP13.86□□□□□ -0.19
ATXN1-202ENST00000436367 RB1CC1Q8TDY2 1594 aa13.84□□□□□ -0.19
ATXN1-202ENST00000436367 NACADO15069 1562 aa13.77□□□□□ -0.21
ATXN1-202ENST00000436367 PABPN1Q86U42 306 aaKnown RBP eCLIP13.73□□□□□ -0.21
ATXN1-202ENST00000436367 DAXXQ9UER7 740 aaPredicted RBP13.68□□□□□ -0.22
ATXN1-202ENST00000436367 DCAF1Q9Y4B6 1507 aa13.65□□□□□ -0.22
ATXN1-202ENST00000436367 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP13.61□□□□□ -0.23
ATXN1-202ENST00000436367 HNRNPUL2Q1KMD3 747 aaKnown RBP13.61□□□□□ -0.23
ATXN1-202ENST00000436367 LOC105371045A0A1W2PR82 267 aa13.55□□□□□ -0.24
ATXN1-202ENST00000436367 HRCP23327 699 aa13.53□□□□□ -0.24
ATXN1-202ENST00000436367 PPARGC1BQ86YN6 1023 aaKnown RBP13.51□□□□□ -0.25
ATXN1-202ENST00000436367 ITGAEP38570 1179 aa13.45□□□□□ -0.26
ATXN1-202ENST00000436367 MYT1LQ9UL68 1186 aa13.44□□□□□ -0.26
ATXN1-202ENST00000436367 RTL5Q5HYW3 569 aaPredicted RBP13.42□□□□□ -0.26
ATXN1-202ENST00000436367 BAZ1AQ9NRL2 1556 aaPredicted RBP13.4□□□□□ -0.26
ATXN1-202ENST00000436367 CSRNP3Q8WYN3 585 aa13.36□□□□□ -0.27
ATXN1-202ENST00000436367 ZNF316A6NFI3 1004 aaPredicted RBP13.36□□□□□ -0.27
ATXN1-202ENST00000436367 MYO15BQ96JP2 1530 aa13.36□□□□□ -0.27
ATXN1-202ENST00000436367 FAM50AQ14320 339 aaKnown RBP13.33□□□□□ -0.27
ATXN1-202ENST00000436367 EEA1Q15075 1411 aa13.33□□□□□ -0.28
ATXN1-202ENST00000436367 BAZ1BQ9UIG0 1483 aaKnown RBP13.33□□□□□ -0.28
ATXN1-202ENST00000436367 RSF1Q96T23 1441 aaPredicted RBP13.28□□□□□ -0.28
ATXN1-202ENST00000436367 CDK11AQ9UQ88 783 aaPredicted RBP13.26□□□□□ -0.29
ATXN1-202ENST00000436367 FBLN2P98095 1184 aa13.21□□□□□ -0.29
ATXN1-202ENST00000436367 TRIM52Q96A61 297 aa13.2□□□□□ -0.3
ATXN1-202ENST00000436367 POLR3GLQ9BT43 218 aa13.18□□□□□ -0.3
ATXN1-202ENST00000436367 SMARCA2P51531 1590 aa13.18□□□□□ -0.3
ATXN1-202ENST00000436367 GOLGA3Q08378 1498 aa13.15□□□□□ -0.3
ATXN1-202ENST00000436367 DIEXFQ68CQ4 756 aaKnown RBP13.15□□□□□ -0.3
ATXN1-202ENST00000436367 WRNQ14191 1432 aaPredicted RBP eCLIP13.13□□□□□ -0.31
ATXN1-202ENST00000436367 CLSPNQ9HAW4 1339 aa13.13□□□□□ -0.31
ATXN1-202ENST00000436367 CLIP1P30622 1438 aa13.11□□□□□ -0.31
ATXN1-202ENST00000436367 CEP164Q9UPV0 1460 aa13.08□□□□□ -0.32
ATXN1-202ENST00000436367 KIF27Q86VH2 1401 aa13.08□□□□□ -0.32
ATXN1-202ENST00000436367 ACIN1Q9UKV3 1341 aaKnown RBP13.06□□□□□ -0.32
ATXN1-202ENST00000436367 GLIPR1L2Q4G1C9 344 aa13.05□□□□□ -0.32
ATXN1-202ENST00000436367 NEUROD1Q13562 356 aa13.03□□□□□ -0.32
ATXN1-202ENST00000436367 TOP2AP11388 1531 aaKnown RBP13.02□□□□□ -0.33
ATXN1-202ENST00000436367 ANP32CO43423 234 aa13.02□□□□□ -0.33
ATXN1-202ENST00000436367 CNGB1Q14028 1251 aaPredicted RBP13.01□□□□□ -0.33
ATXN1-202ENST00000436367 P3H3Q8IVL6 736 aa13.01□□□□□ -0.33
ATXN1-202ENST00000436367 SLC4A1APQ9BWU0 796 aaKnown RBP13.01□□□□□ -0.33
ATXN1-202ENST00000436367 CEP162Q5TB80 1403 aa12.99□□□□□ -0.33
ATXN1-202ENST00000436367 MTUS2Q5JR59 1369 aa12.97□□□□□ -0.33
ATXN1-202ENST00000436367 CECR2Q9BXF3 1484 aa12.97□□□□□ -0.33
ATXN1-202ENST00000436367 TONSLQ96HA7 1378 aa12.96□□□□□ -0.33
ATXN1-202ENST00000436367 ZNF326Q5BKZ1 582 aaKnown RBP12.96□□□□□ -0.33
ATXN1-202ENST00000436367 SMARCA4P51532 1647 aa12.95□□□□□ -0.34
ATXN1-202ENST00000436367 ERCC6Q03468 1493 aa12.95□□□□□ -0.34
ATXN1-202ENST00000436367 TNIKQ9UKE5 1360 aa12.94□□□□□ -0.34
ATXN1-202ENST00000436367 EIF5BO60841 1220 aaKnown RBP12.94□□□□□ -0.34
ATXN1-202ENST00000436367 MROH2BQ7Z745 1585 aa12.93□□□□□ -0.34
ATXN1-202ENST00000436367 CHMP7Q8WUX9 453 aaPredicted RBP12.93□□□□□ -0.34
ATXN1-202ENST00000436367 ZNF777Q9ULD5 760 aaPredicted RBP12.93□□□□□ -0.34
ATXN1-202ENST00000436367 NPM1P06748 294 aaKnown RBP eCLIP12.93□□□□□ -0.34
ATXN1-202ENST00000436367 BCANQ96GW7 911 aa12.92□□□□□ -0.34
ATXN1-202ENST00000436367 WIZO95785 1651 aa12.9□□□□□ -0.34
ATXN1-202ENST00000436367 ARID3CA6NKF2 412 aa12.9□□□□□ -0.34
ATXN1-202ENST00000436367 ZBTB47Q9UFB7 747 aaPredicted RBP12.89□□□□□ -0.35
ATXN1-202ENST00000436367 FHAD1B1AJZ9 1412 aa12.89□□□□□ -0.35
ATXN1-202ENST00000436367 NEFMP07197 916 aa12.87□□□□□ -0.35
ATXN1-202ENST00000436367 CCDC88BA6NC98 1476 aa12.86□□□□□ -0.35
ATXN1-202ENST00000436367 ESF1Q9H501 851 aaKnown RBP12.86□□□□□ -0.35
ATXN1-202ENST00000436367 PDS5BQ9NTI5 1447 aa12.82□□□□□ -0.36
ATXN1-202ENST00000436367 TSPY4P0CV99 314 aa12.8□□□□□ -0.36
ATXN1-202ENST00000436367 TSPY10P0CW01 314 aa12.8□□□□□ -0.36
ATXN1-202ENST00000436367 CUX2O14529 1486 aa12.79□□□□□ -0.36
ATXN1-202ENST00000436367 ABCC8Q09428 1581 aa12.76□□□□□ -0.37
ATXN1-202ENST00000436367 PLEKHD1A6NEE1 506 aa12.73□□□□□ -0.37
ATXN1-202ENST00000436367 GTF3C3Q9Y5Q9 886 aa12.73□□□□□ -0.37
ATXN1-202ENST00000436367 EIF4G1Q04637 1599 aaKnown RBP12.73□□□□□ -0.37
ATXN1-202ENST00000436367 ANP32BQ92688 251 aaKnown RBP12.73□□□□□ -0.37
ATXN1-202ENST00000436367 CARMIL1Q5VZK9 1371 aa12.72□□□□□ -0.37
ATXN1-202ENST00000436367 CANXP27824 592 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 13.9 ms