Protein–RNA interactions for Protein: Q9NZI2

KCNIP1, Kv channel-interacting protein 1, humanhuman

Predictions only

Length 227 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KCNIP1Q9NZI2 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC21.19■□□□□ 0.98
KCNIP1Q9NZI2 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 LMTK3-201ENST00000270238 4972 ntAPPRIS P2 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC21.18■□□□□ 0.98
KCNIP1Q9NZI2 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC21.17■□□□□ 0.98
KCNIP1Q9NZI2 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC21.17■□□□□ 0.98
KCNIP1Q9NZI2 MIR6090-201ENST00000622481 60 ntBASIC21.17■□□□□ 0.98
KCNIP1Q9NZI2 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNIP1Q9NZI2 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC21.17■□□□□ 0.98
KCNIP1Q9NZI2 AP002414.2-202ENST00000590929 1450 ntBASIC21.16■□□□□ 0.98
KCNIP1Q9NZI2 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC21.15■□□□□ 0.98
KCNIP1Q9NZI2 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC21.15■□□□□ 0.98
KCNIP1Q9NZI2 LINC01003-201ENST00000564834 1764 ntBASIC21.15■□□□□ 0.98
KCNIP1Q9NZI2 AC135983.2-203ENST00000454486 1613 ntBASIC21.15■□□□□ 0.98
KCNIP1Q9NZI2 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC21.14■□□□□ 0.98
KCNIP1Q9NZI2 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.98
KCNIP1Q9NZI2 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.14■□□□□ 0.98
KCNIP1Q9NZI2 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC21.14■□□□□ 0.97
KCNIP1Q9NZI2 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNIP1Q9NZI2 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC21.14■□□□□ 0.97
KCNIP1Q9NZI2 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNIP1Q9NZI2 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC21.14■□□□□ 0.97
KCNIP1Q9NZI2 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC21.13■□□□□ 0.97
KCNIP1Q9NZI2 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC21.13■□□□□ 0.97
KCNIP1Q9NZI2 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC21.13■□□□□ 0.97
KCNIP1Q9NZI2 SHF-208ENST00000560734 1731 ntTSL 3 BASIC21.12■□□□□ 0.97
KCNIP1Q9NZI2 NMB-201ENST00000360476 1007 ntAPPRIS P1 TSL 1 (best) BASIC21.12■□□□□ 0.97
KCNIP1Q9NZI2 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC21.12■□□□□ 0.97
KCNIP1Q9NZI2 ZFP90-204ENST00000564323 560 ntTSL 4 BASIC21.12■□□□□ 0.97
KCNIP1Q9NZI2 ZFP90-219ENST00000611381 695 ntTSL 1 (best) BASIC21.12■□□□□ 0.97
KCNIP1Q9NZI2 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC21.11■□□□□ 0.97
KCNIP1Q9NZI2 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.11■□□□□ 0.97
KCNIP1Q9NZI2 AL121749.1-202ENST00000609313 2153 ntBASIC21.11■□□□□ 0.97
KCNIP1Q9NZI2 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.11■□□□□ 0.97
KCNIP1Q9NZI2 CARM1-202ENST00000344150 2722 ntAPPRIS ALT2 TSL 5 BASIC21.11■□□□□ 0.97
KCNIP1Q9NZI2 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 LINC00273-201ENST00000539813 1452 ntBASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 CACNG6-202ENST00000346968 645 ntTSL 5 BASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC21.1■□□□□ 0.97
KCNIP1Q9NZI2 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.09■□□□□ 0.97
KCNIP1Q9NZI2 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNIP1Q9NZI2 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC21.09■□□□□ 0.97
KCNIP1Q9NZI2 NAT8L-202ENST00000423729 5870 ntAPPRIS P1 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNIP1Q9NZI2 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC21.09■□□□□ 0.97
KCNIP1Q9NZI2 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC21.09■□□□□ 0.97
KCNIP1Q9NZI2 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.08■□□□□ 0.97
KCNIP1Q9NZI2 WHAMMP2-203ENST00000563942 1603 ntBASIC21.08■□□□□ 0.97
KCNIP1Q9NZI2 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC21.08■□□□□ 0.97
KCNIP1Q9NZI2 MAGI2-208ENST00000522391 4878 ntAPPRIS ALT2 TSL 5 BASIC21.07■□□□□ 0.96
KCNIP1Q9NZI2 PURG-201ENST00000339382 2693 ntTSL 1 (best) BASIC21.06■□□□□ 0.96
KCNIP1Q9NZI2 CADPS-215ENST00000490353 2669 ntTSL 5 BASIC21.06■□□□□ 0.96
KCNIP1Q9NZI2 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNIP1Q9NZI2 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC21.06■□□□□ 0.96
KCNIP1Q9NZI2 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.06■□□□□ 0.96
KCNIP1Q9NZI2 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNIP1Q9NZI2 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC21.05■□□□□ 0.96
KCNIP1Q9NZI2 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 AC087741.3-201ENST00000624270 1347 ntBASIC21.04■□□□□ 0.96
KCNIP1Q9NZI2 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 PLD4-201ENST00000392593 6515 ntAPPRIS P3 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 AC044849.2-201ENST00000606596 710 ntBASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 CAPNS1-217ENST00000629983 799 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.03■□□□□ 0.96
KCNIP1Q9NZI2 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
KCNIP1Q9NZI2 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.02■□□□□ 0.96
KCNIP1Q9NZI2 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.02■□□□□ 0.96
KCNIP1Q9NZI2 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.02■□□□□ 0.96
KCNIP1Q9NZI2 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.02■□□□□ 0.96
KCNIP1Q9NZI2 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.02■□□□□ 0.95
KCNIP1Q9NZI2 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.01■□□□□ 0.95
KCNIP1Q9NZI2 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.01■□□□□ 0.95
KCNIP1Q9NZI2 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21■□□□□ 0.95
KCNIP1Q9NZI2 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21■□□□□ 0.95
KCNIP1Q9NZI2 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21■□□□□ 0.95
KCNIP1Q9NZI2 SSX2IP-203ENST00000437941 5843 ntTSL 2 BASIC21■□□□□ 0.95
KCNIP1Q9NZI2 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC20.99■□□□□ 0.95
KCNIP1Q9NZI2 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC20.99■□□□□ 0.95
KCNIP1Q9NZI2 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNIP1Q9NZI2 AC018358.1-201ENST00000631079 1402 ntBASIC20.99■□□□□ 0.95
KCNIP1Q9NZI2 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.99■□□□□ 0.95
KCNIP1Q9NZI2 TM9SF3-201ENST00000371142 6141 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNIP1Q9NZI2 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNIP1Q9NZI2 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.98■□□□□ 0.95
KCNIP1Q9NZI2 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.98■□□□□ 0.95
KCNIP1Q9NZI2 AL162393.1-201ENST00000437852 946 ntBASIC20.98■□□□□ 0.95
KCNIP1Q9NZI2 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.98■□□□□ 0.95
Retrieved 100 of 98,524 protein–RNA pairs in 67.5 ms