Protein–RNA interactions for Protein: Q9NW08

POLR3B, DNA-directed RNA polymerase III subunit RPC2, humanhuman

Predicted RBP Predictions only

Length 1,133 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR3BQ9NW08 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC26.26■■□□□ 1.79
POLR3BQ9NW08 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC26.25■■□□□ 1.79
POLR3BQ9NW08 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC26.25■■□□□ 1.79
POLR3BQ9NW08 AC127502.1-201ENST00000399971 1502 ntBASIC26.25■■□□□ 1.79
POLR3BQ9NW08 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC26.25■■□□□ 1.79
POLR3BQ9NW08 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC26.25■■□□□ 1.79
POLR3BQ9NW08 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC26.25■■□□□ 1.79
POLR3BQ9NW08 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC26.24■■□□□ 1.79
POLR3BQ9NW08 ST6GALNAC6-203ENST00000373142 2448 ntTSL 1 (best) BASIC26.24■■□□□ 1.79
POLR3BQ9NW08 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC26.23■■□□□ 1.79
POLR3BQ9NW08 AC022413.1-201ENST00000624602 984 ntBASIC26.23■■□□□ 1.79
POLR3BQ9NW08 WHAMMP2-203ENST00000563942 1603 ntBASIC26.23■■□□□ 1.79
POLR3BQ9NW08 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC26.23■■□□□ 1.79
POLR3BQ9NW08 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC26.22■■□□□ 1.79
POLR3BQ9NW08 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC26.21■■□□□ 1.79
POLR3BQ9NW08 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC26.21■■□□□ 1.79
POLR3BQ9NW08 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC26.21■■□□□ 1.79
POLR3BQ9NW08 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC26.21■■□□□ 1.79
POLR3BQ9NW08 AC139426.1-201ENST00000568218 2529 ntBASIC26.21■■□□□ 1.79
POLR3BQ9NW08 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC26.21■■□□□ 1.79
POLR3BQ9NW08 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC26.2■■□□□ 1.79
POLR3BQ9NW08 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3BQ9NW08 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3BQ9NW08 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3BQ9NW08 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC26.19■■□□□ 1.78
POLR3BQ9NW08 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC26.18■■□□□ 1.78
POLR3BQ9NW08 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC26.18■■□□□ 1.78
POLR3BQ9NW08 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC26.17■■□□□ 1.78
POLR3BQ9NW08 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC26.17■■□□□ 1.78
POLR3BQ9NW08 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC26.16■■□□□ 1.78
POLR3BQ9NW08 BAX-202ENST00000345358 793 ntAPPRIS P1 TSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3BQ9NW08 PTCH1-210ENST00000468211 1254 ntTSL 1 (best) BASIC26.16■■□□□ 1.78
POLR3BQ9NW08 AC135983.2-203ENST00000454486 1613 ntBASIC26.16■■□□□ 1.78
POLR3BQ9NW08 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC26.16■■□□□ 1.78
POLR3BQ9NW08 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3BQ9NW08 CDKN3-202ENST00000335183 893 ntAPPRIS P2 TSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3BQ9NW08 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC26.15■■□□□ 1.78
POLR3BQ9NW08 CDKN3-211ENST00000611205 874 ntAPPRIS ALT2 TSL 5 BASIC26.15■■□□□ 1.78
POLR3BQ9NW08 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC26.15■■□□□ 1.78
POLR3BQ9NW08 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3BQ9NW08 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3BQ9NW08 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3BQ9NW08 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3BQ9NW08 C16orf74-204ENST00000602719 1002 ntAPPRIS ALT2 TSL 3 BASIC26.14■■□□□ 1.78
POLR3BQ9NW08 TPI1-201ENST00000229270 1763 ntTSL 1 (best) BASIC26.14■■□□□ 1.78
POLR3BQ9NW08 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC26.13■■□□□ 1.77
POLR3BQ9NW08 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC26.13■■□□□ 1.77
POLR3BQ9NW08 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC26.12■■□□□ 1.77
POLR3BQ9NW08 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC26.12■■□□□ 1.77
POLR3BQ9NW08 FGF18-201ENST00000274625 1986 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3BQ9NW08 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3BQ9NW08 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC26.12■■□□□ 1.77
POLR3BQ9NW08 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC26.11■■□□□ 1.77
POLR3BQ9NW08 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC26.11■■□□□ 1.77
POLR3BQ9NW08 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
POLR3BQ9NW08 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC26.11■■□□□ 1.77
POLR3BQ9NW08 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 NTF6A-201ENST00000591175 560 ntBASIC26.1■■□□□ 1.77
POLR3BQ9NW08 EXOC3L4-201ENST00000380069 2293 ntAPPRIS P1 TSL 1 (best) BASIC26.1■■□□□ 1.77
POLR3BQ9NW08 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC26.09■■□□□ 1.77
POLR3BQ9NW08 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC26.09■■□□□ 1.77
POLR3BQ9NW08 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC26.09■■□□□ 1.77
POLR3BQ9NW08 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.77
POLR3BQ9NW08 SHF-206ENST00000560471 2499 ntTSL 5 BASIC26.08■■□□□ 1.77
POLR3BQ9NW08 RTN4R-201ENST00000043402 2157 ntAPPRIS P2 TSL 1 (best) BASIC26.08■■□□□ 1.77
POLR3BQ9NW08 NPW-202ENST00000566435 991 ntAPPRIS ALT2 TSL 1 (best) BASIC26.08■■□□□ 1.77
POLR3BQ9NW08 HOXB3-212ENST00000498678 2196 ntAPPRIS P1 TSL 2 BASIC26.07■■□□□ 1.76
POLR3BQ9NW08 CERS2-205ENST00000368954 2505 ntAPPRIS P1 TSL 1 (best) BASIC26.07■■□□□ 1.76
POLR3BQ9NW08 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC26.07■■□□□ 1.76
POLR3BQ9NW08 ATF4-201ENST00000337304 2019 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
POLR3BQ9NW08 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
POLR3BQ9NW08 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC26.06■■□□□ 1.76
POLR3BQ9NW08 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC26.06■■□□□ 1.76
POLR3BQ9NW08 AC110285.7-201ENST00000624417 1536 ntBASIC26.05■■□□□ 1.76
POLR3BQ9NW08 MANF-204ENST00000528157 1153 ntAPPRIS P1 TSL 1 (best) BASIC26.05■■□□□ 1.76
POLR3BQ9NW08 AC008813.1-201ENST00000536597 885 ntBASIC26.05■■□□□ 1.76
POLR3BQ9NW08 CHST11-203ENST00000547956 936 ntTSL 2 BASIC26.05■■□□□ 1.76
POLR3BQ9NW08 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC26.05■■□□□ 1.76
POLR3BQ9NW08 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC26.05■■□□□ 1.76
POLR3BQ9NW08 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC26.04■■□□□ 1.76
POLR3BQ9NW08 DCUN1D5-201ENST00000260247 1337 ntAPPRIS P1 TSL 1 (best) BASIC26.04■■□□□ 1.76
POLR3BQ9NW08 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC26.04■■□□□ 1.76
POLR3BQ9NW08 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC26.03■■□□□ 1.76
POLR3BQ9NW08 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC26.03■■□□□ 1.76
POLR3BQ9NW08 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC26.03■■□□□ 1.76
POLR3BQ9NW08 NEURL1B-203ENST00000522853 1263 ntTSL 1 (best) BASIC26.02■■□□□ 1.76
POLR3BQ9NW08 AC012354.3-201ENST00000623734 483 ntBASIC26.02■■□□□ 1.76
POLR3BQ9NW08 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.02■■□□□ 1.76
POLR3BQ9NW08 C1QTNF8-201ENST00000328449 1627 ntAPPRIS P1 TSL 5 BASIC26.01■■□□□ 1.75
POLR3BQ9NW08 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
POLR3BQ9NW08 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC26■■□□□ 1.75
POLR3BQ9NW08 ACOT1-202ENST00000557556 1271 ntTSL 1 (best) BASIC26■■□□□ 1.75
POLR3BQ9NW08 AL033527.3-201ENST00000566366 1196 ntBASIC26■■□□□ 1.75
POLR3BQ9NW08 AL139393.2-201ENST00000608721 2025 ntBASIC26■■□□□ 1.75
POLR3BQ9NW08 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC26■■□□□ 1.75
Retrieved 100 of 98,524 protein–RNA pairs in 44.1 ms