Protein–RNA interactions for Protein: Q9H1A7

POLR2J3, DNA-directed RNA polymerase II subunit RPB11-b2, humanhuman

Known RBP Predictions only

Length 115 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
POLR2J3Q9H1A7 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC23.37■■□□□ 1.33
POLR2J3Q9H1A7 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC23.36■■□□□ 1.33
POLR2J3Q9H1A7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC23.36■■□□□ 1.33
POLR2J3Q9H1A7 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 RCAN1-201ENST00000313806 2490 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC23.35■■□□□ 1.33
POLR2J3Q9H1A7 PDCD2-215ENST00000614056 1287 ntTSL 2 BASIC23.34■■□□□ 1.33
POLR2J3Q9H1A7 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC23.34■■□□□ 1.33
POLR2J3Q9H1A7 EI24-212ENST00000615917 1407 ntTSL 2 BASIC23.33■■□□□ 1.33
POLR2J3Q9H1A7 CCNYL1-203ENST00000392209 1952 ntTSL 2 BASIC23.33■■□□□ 1.33
POLR2J3Q9H1A7 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.33
POLR2J3Q9H1A7 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC23.33■■□□□ 1.32
POLR2J3Q9H1A7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 AC135983.2-203ENST00000454486 1613 ntBASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC23.32■■□□□ 1.32
POLR2J3Q9H1A7 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 FAM185A-202ENST00000413034 1179 ntAPPRIS P4 TSL 5 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC23.31■■□□□ 1.32
POLR2J3Q9H1A7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 PGAM5-201ENST00000317555 1182 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC23.3■■□□□ 1.32
POLR2J3Q9H1A7 SHF-207ENST00000560540 2062 ntTSL 5 BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 MTMR1-202ENST00000370390 2755 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC23.29■■□□□ 1.32
POLR2J3Q9H1A7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC23.28■■□□□ 1.32
POLR2J3Q9H1A7 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 MIR3665-201ENST00000578708 105 ntBASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 LINC00273-201ENST00000539813 1452 ntBASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 PCYT2-203ENST00000538936 5147 ntTSL 1 (best) BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC23.27■■□□□ 1.32
POLR2J3Q9H1A7 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 OSBP-201ENST00000263847 5083 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 DUX4L28-201ENST00000623687 678 ntBASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC23.26■■□□□ 1.31
POLR2J3Q9H1A7 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC23.25■■□□□ 1.31
POLR2J3Q9H1A7 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 CFAP73-201ENST00000335621 1514 ntAPPRIS P1 TSL 5 BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 MSANTD2-203ENST00000524950 1109 ntTSL 2 BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC23.24■■□□□ 1.31
POLR2J3Q9H1A7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 AP006261.1-201ENST00000584783 668 ntBASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 MIR6090-201ENST00000622481 60 ntBASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 DLG3-203ENST00000374360 5905 ntAPPRIS P2 TSL 1 (best) BASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 AC018358.1-201ENST00000631079 1402 ntBASIC23.23■■□□□ 1.31
POLR2J3Q9H1A7 S100A10-202ENST00000368811 1202 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC23.22■■□□□ 1.31
POLR2J3Q9H1A7 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC23.21■■□□□ 1.31
POLR2J3Q9H1A7 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC23.21■■□□□ 1.31
POLR2J3Q9H1A7 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC23.2■■□□□ 1.3
POLR2J3Q9H1A7 WHAMMP2-203ENST00000563942 1603 ntBASIC23.2■■□□□ 1.3
POLR2J3Q9H1A7 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC23.2■■□□□ 1.3
POLR2J3Q9H1A7 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC23.19■■□□□ 1.3
POLR2J3Q9H1A7 DOCK5-202ENST00000410074 786 ntTSL 2 BASIC23.19■■□□□ 1.3
POLR2J3Q9H1A7 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC23.19■■□□□ 1.3
POLR2J3Q9H1A7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 PKM-203ENST00000389093 2279 ntTSL 5 BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC23.18■■□□□ 1.3
POLR2J3Q9H1A7 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2J3Q9H1A7 UBE2A-207ENST00000628549 934 ntTSL 2 BASIC23.17■■□□□ 1.3
POLR2J3Q9H1A7 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC23.17■■□□□ 1.3
POLR2J3Q9H1A7 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC23.16■■□□□ 1.3
POLR2J3Q9H1A7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2J3Q9H1A7 RASSF5-204ENST00000580449 1932 ntTSL 1 (best) BASIC23.15■■□□□ 1.3
POLR2J3Q9H1A7 PKDCC-201ENST00000294964 2502 ntAPPRIS P1 TSL 1 (best) BASIC23.15■■□□□ 1.3
Retrieved 100 of 98,524 protein–RNA pairs in 15.6 ms