Protein–RNA interactions for Protein: Q96MX3

ZNF48, Zinc finger protein 48, humanhuman

Predicted RBP Predictions only

Length 618 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ZNF48Q96MX3 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF48Q96MX3 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
ZNF48Q96MX3 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF48Q96MX3 IGFBPL1-201ENST00000377694 1093 ntAPPRIS P1 TSL 2 BASIC20.69■□□□□ 0.9
ZNF48Q96MX3 AGO3-204ENST00000397828 1035 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF48Q96MX3 CCZ1B-215ENST00000626257 2211 ntTSL 2 BASIC20.69■□□□□ 0.9
ZNF48Q96MX3 AC110285.7-201ENST00000624417 1536 ntBASIC20.68■□□□□ 0.9
ZNF48Q96MX3 EMC10-202ENST00000376918 2014 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 PDF-201ENST00000288022 1158 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 C1orf122-201ENST00000373042 973 ntAPPRIS P3 TSL 1 (best) BASIC20.68■□□□□ 0.9
ZNF48Q96MX3 AC022413.1-201ENST00000624602 984 ntBASIC20.68■□□□□ 0.9
ZNF48Q96MX3 FGFRL1-205ENST00000510644 2304 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 HNRNPAB-202ENST00000358344 1796 ntAPPRIS P4 TSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 TPRA1-209ENST00000489960 1903 ntAPPRIS P1 TSL 5 BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 RPRML-201ENST00000322329 1093 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 ELOC-207ENST00000522337 816 ntAPPRIS P1 TSL 2 BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 RPARP-AS1-205ENST00000596045 431 ntTSL 3 BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 GADD45A-205ENST00000617962 1142 ntTSL 1 (best) BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 SSTR4-201ENST00000255008 1427 ntAPPRIS P1 BASIC20.67■□□□□ 0.9
ZNF48Q96MX3 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC20.67■□□□□ 0.9
ZNF48Q96MX3 TAF10-201ENST00000299424 1215 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF48Q96MX3 MDFIC-203ENST00000423503 474 ntTSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF48Q96MX3 C16orf95-206ENST00000618367 974 ntAPPRIS ALT2 TSL 2 BASIC20.66■□□□□ 0.9
ZNF48Q96MX3 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF48Q96MX3 CUL4A-202ENST00000375440 2364 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
ZNF48Q96MX3 LSM7-201ENST00000252622 529 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF48Q96MX3 MAPK3-205ENST00000395202 1008 ntTSL 1 (best) BASIC20.65■□□□□ 0.9
ZNF48Q96MX3 CHST11-203ENST00000547956 936 ntTSL 2 BASIC20.65■□□□□ 0.9
ZNF48Q96MX3 TMEM114-202ENST00000568335 899 ntTSL 3 BASIC20.65■□□□□ 0.9
ZNF48Q96MX3 PCSK6-201ENST00000331826 2309 ntTSL 5 BASIC20.65■□□□□ 0.9
ZNF48Q96MX3 RUNDC3A-206ENST00000590941 1675 ntTSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF48Q96MX3 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.9
ZNF48Q96MX3 COPZ2-210ENST00000621465 895 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF48Q96MX3 TSR3-201ENST00000007390 1243 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF48Q96MX3 EFNA3-201ENST00000368408 1782 ntAPPRIS P1 TSL 1 (best) BASIC20.64■□□□□ 0.89
ZNF48Q96MX3 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC20.64■□□□□ 0.89
ZNF48Q96MX3 AGFG1-205ENST00000409979 2089 ntAPPRIS ALT1 TSL 5 BASIC20.63■□□□□ 0.89
ZNF48Q96MX3 TPRA1-202ENST00000355552 1933 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF48Q96MX3 ATPAF1-202ENST00000371937 1827 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF48Q96MX3 RASSF8-202ENST00000381352 2320 ntTSL 1 (best) BASIC20.63■□□□□ 0.89
ZNF48Q96MX3 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF48Q96MX3 AC078883.1-202ENST00000450443 1397 ntTSL 3 BASIC20.62■□□□□ 0.89
ZNF48Q96MX3 MDFIC-208ENST00000614186 1068 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF48Q96MX3 BIN1-204ENST00000348750 2074 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
ZNF48Q96MX3 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF48Q96MX3 FOXE3-201ENST00000335071 1981 ntAPPRIS P1 BASIC20.61■□□□□ 0.89
ZNF48Q96MX3 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC20.61■□□□□ 0.89
ZNF48Q96MX3 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF48Q96MX3 ACOT7-201ENST00000361521 2429 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
ZNF48Q96MX3 RAD51-210ENST00000557850 1397 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF48Q96MX3 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF48Q96MX3 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
ZNF48Q96MX3 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC20.6■□□□□ 0.89
ZNF48Q96MX3 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.6■□□□□ 0.89
ZNF48Q96MX3 ATOH7-201ENST00000373673 1480 ntAPPRIS P1 BASIC20.6■□□□□ 0.89
ZNF48Q96MX3 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 EFNA1-202ENST00000368407 1926 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 HOXD-AS2-201ENST00000426965 927 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 WDSUB1-205ENST00000409990 1920 ntAPPRIS P1 TSL 2 BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
ZNF48Q96MX3 PXDC1-202ENST00000380283 2190 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.89
ZNF48Q96MX3 PLEKHF2-202ENST00000519516 1144 ntAPPRIS P1 TSL 3 BASIC20.58■□□□□ 0.89
ZNF48Q96MX3 AC148477.6-201ENST00000623746 465 ntBASIC20.58■□□□□ 0.89
ZNF48Q96MX3 SIRT3-201ENST00000382743 2543 ntAPPRIS P2 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF48Q96MX3 PEX7-203ENST00000541292 945 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF48Q96MX3 KCTD5-202ENST00000564195 774 ntTSL 5 BASIC20.57■□□□□ 0.88
ZNF48Q96MX3 MAF-201ENST00000326043 2646 ntAPPRIS P3 TSL 1 (best) BASIC20.57■□□□□ 0.88
ZNF48Q96MX3 DCDC2C-201ENST00000399143 1476 ntAPPRIS P1 TSL 5 BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 NEUROG2-201ENST00000313341 2287 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 RPS2-210ENST00000530225 765 ntTSL 2 BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 TM6SF1-202ENST00000322019 2074 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 FOXQ1-201ENST00000296839 2309 ntAPPRIS P1 BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 RCC1L-202ENST00000614461 2419 ntTSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.56■□□□□ 0.88
ZNF48Q96MX3 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF48Q96MX3 PXMP2-201ENST00000317479 957 ntAPPRIS P1 TSL 1 (best) BASIC20.55■□□□□ 0.88
ZNF48Q96MX3 HES4-202ENST00000428771 1040 ntTSL 2 BASIC20.55■□□□□ 0.88
ZNF48Q96MX3 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF48Q96MX3 TESK1-206ENST00000620767 2438 ntAPPRIS P1 TSL 5 BASIC20.55■□□□□ 0.88
ZNF48Q96MX3 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC20.54■□□□□ 0.88
ZNF48Q96MX3 EPB41L4A-AS2-201ENST00000623705 1396 ntBASIC20.54■□□□□ 0.88
ZNF48Q96MX3 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.54■□□□□ 0.88
ZNF48Q96MX3 FEV-201ENST00000295727 1879 ntAPPRIS P1 TSL 1 (best) BASIC20.54■□□□□ 0.88
ZNF48Q96MX3 AC005540.1-201ENST00000413911 919 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF48Q96MX3 LIME1-206ENST00000487026 805 ntAPPRIS ALT2 TSL 5 BASIC20.53■□□□□ 0.88
ZNF48Q96MX3 AC060814.1-201ENST00000554326 538 ntBASIC20.53■□□□□ 0.88
ZNF48Q96MX3 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF48Q96MX3 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.53■□□□□ 0.88
ZNF48Q96MX3 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF48Q96MX3 PGM5P2-201ENST00000613141 1980 ntTSL 1 (best) BASIC20.53■□□□□ 0.88
ZNF48Q96MX3 MIR219A2-201ENST00000608502 1504 ntBASIC20.53■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 39.9 ms