Protein–RNA interactions for Protein: Q8IWY4

SCUBE1, Signal peptide, CUB and EGF-like domain-containing protein 1, humanhuman

Predictions only

Length 988 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
SCUBE1Q8IWY4 GNAS-210ENST00000371085 1972 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SCUBE1Q8IWY4 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC24.88■■□□□ 1.57
SCUBE1Q8IWY4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC24.88■■□□□ 1.57
SCUBE1Q8IWY4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC24.88■■□□□ 1.57
SCUBE1Q8IWY4 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC24.87■■□□□ 1.57
SCUBE1Q8IWY4 GPR150-201ENST00000380007 2065 ntAPPRIS P1 BASIC24.87■■□□□ 1.57
SCUBE1Q8IWY4 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC24.87■■□□□ 1.57
SCUBE1Q8IWY4 KLC1-225ENST00000557575 2188 ntTSL 5 BASIC24.87■■□□□ 1.57
SCUBE1Q8IWY4 MSANTD2-201ENST00000239614 2495 ntTSL 2 BASIC24.87■■□□□ 1.57
SCUBE1Q8IWY4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC24.86■■□□□ 1.57
SCUBE1Q8IWY4 SNTA1-201ENST00000217381 2342 ntAPPRIS P1 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCUBE1Q8IWY4 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC24.86■■□□□ 1.57
SCUBE1Q8IWY4 BMP8A-201ENST00000331593 1692 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCUBE1Q8IWY4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCUBE1Q8IWY4 AP000547.3-202ENST00000592107 1019 ntTSL 1 (best) BASIC24.85■■□□□ 1.57
SCUBE1Q8IWY4 MKNK2-202ENST00000309340 1744 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCUBE1Q8IWY4 SHD-201ENST00000543264 2577 ntAPPRIS P1 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCUBE1Q8IWY4 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC24.85■■□□□ 1.57
SCUBE1Q8IWY4 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCUBE1Q8IWY4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC24.84■■□□□ 1.57
SCUBE1Q8IWY4 TCEA2-202ENST00000343484 1235 ntAPPRIS P1 TSL 1 (best) BASIC24.84■■□□□ 1.57
SCUBE1Q8IWY4 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC24.83■■□□□ 1.57
SCUBE1Q8IWY4 FANCE-201ENST00000229769 2554 ntAPPRIS P1 TSL 1 (best) BASIC24.83■■□□□ 1.56
SCUBE1Q8IWY4 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCUBE1Q8IWY4 FSD1L-208ENST00000495708 1906 ntTSL 1 (best) BASIC24.82■■□□□ 1.56
SCUBE1Q8IWY4 SPG21-201ENST00000204566 1822 ntAPPRIS P1 TSL 1 (best) BASIC24.82■■□□□ 1.56
SCUBE1Q8IWY4 NELFB-201ENST00000343053 2698 ntAPPRIS ALT2 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 MBOAT7-201ENST00000245615 2529 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 PPP3CC-204ENST00000518852 1598 ntTSL 2 BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 ANKS1B-203ENST00000341752 2115 ntTSL 2 BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 AC044849.2-201ENST00000606596 710 ntBASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 CAPN10-204ENST00000354082 1999 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 PCK2-202ENST00000396973 1830 ntTSL 1 (best) BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC24.81■■□□□ 1.56
SCUBE1Q8IWY4 ATP6V1E2-204ENST00000522587 1559 ntAPPRIS P1 TSL 3 BASIC24.8■■□□□ 1.56
SCUBE1Q8IWY4 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC24.8■■□□□ 1.56
SCUBE1Q8IWY4 MYLIP-202ENST00000356840 1666 ntAPPRIS P1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCUBE1Q8IWY4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC24.8■■□□□ 1.56
SCUBE1Q8IWY4 OTUD5-203ENST00000396743 2682 ntAPPRIS ALT1 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCUBE1Q8IWY4 NPAS3-203ENST00000357798 2763 ntAPPRIS ALT2 TSL 1 (best) BASIC24.8■■□□□ 1.56
SCUBE1Q8IWY4 PKM-204ENST00000449901 2526 ntTSL 2 BASIC24.79■■□□□ 1.56
SCUBE1Q8IWY4 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC24.79■■□□□ 1.56
SCUBE1Q8IWY4 CMC4-202ENST00000369484 1107 ntAPPRIS P1 TSL 1 (best) BASIC24.79■■□□□ 1.56
SCUBE1Q8IWY4 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC24.79■■□□□ 1.56
SCUBE1Q8IWY4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC24.79■■□□□ 1.56
SCUBE1Q8IWY4 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC24.78■■□□□ 1.56
SCUBE1Q8IWY4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC24.78■■□□□ 1.56
SCUBE1Q8IWY4 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC24.78■■□□□ 1.56
SCUBE1Q8IWY4 PROC-203ENST00000409048 1586 ntTSL 5 BASIC24.78■■□□□ 1.56
SCUBE1Q8IWY4 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC24.78■■□□□ 1.56
SCUBE1Q8IWY4 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC24.77■■□□□ 1.56
SCUBE1Q8IWY4 BIN1-210ENST00000393041 2272 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCUBE1Q8IWY4 CDKN2A-201ENST00000304494 1218 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCUBE1Q8IWY4 RAPGEF1-203ENST00000372195 6256 ntTSL 1 (best) BASIC24.77■■□□□ 1.56
SCUBE1Q8IWY4 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC24.77■■□□□ 1.56
SCUBE1Q8IWY4 CHPT1-201ENST00000229266 1585 ntAPPRIS P2 TSL 1 (best) BASIC24.76■■□□□ 1.55
SCUBE1Q8IWY4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC24.76■■□□□ 1.55
SCUBE1Q8IWY4 RUNX2-205ENST00000465038 1770 ntAPPRIS P4 TSL 5 BASIC24.76■■□□□ 1.55
SCUBE1Q8IWY4 AC010864.1-201ENST00000609407 1511 ntBASIC24.76■■□□□ 1.55
SCUBE1Q8IWY4 PKM-203ENST00000389093 2279 ntTSL 5 BASIC24.75■■□□□ 1.55
SCUBE1Q8IWY4 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC24.75■■□□□ 1.55
SCUBE1Q8IWY4 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC24.74■■□□□ 1.55
SCUBE1Q8IWY4 FOXA3-201ENST00000302177 1989 ntAPPRIS P1 TSL 1 (best) BASIC24.74■■□□□ 1.55
SCUBE1Q8IWY4 SH3GL1-201ENST00000269886 2516 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCUBE1Q8IWY4 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCUBE1Q8IWY4 MXRA7-203ENST00000449428 1881 ntAPPRIS ALT2 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCUBE1Q8IWY4 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC24.73■■□□□ 1.55
SCUBE1Q8IWY4 MFAP2-202ENST00000375535 1260 ntTSL 1 (best) BASIC24.73■■□□□ 1.55
SCUBE1Q8IWY4 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC24.73■■□□□ 1.55
SCUBE1Q8IWY4 TRADD-201ENST00000345057 1877 ntAPPRIS P1 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCUBE1Q8IWY4 MAZ-202ENST00000322945 2532 ntAPPRIS ALT2 TSL 1 (best) BASIC24.72■■□□□ 1.55
SCUBE1Q8IWY4 SLC15A3-201ENST00000227880 2115 ntAPPRIS P1 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCUBE1Q8IWY4 AC108673.1-201ENST00000510422 1159 ntBASIC24.71■■□□□ 1.55
SCUBE1Q8IWY4 KHSRP-201ENST00000398148 2993 ntAPPRIS P2 TSL 1 (best) BASIC24.71■■□□□ 1.55
SCUBE1Q8IWY4 ECI1-207ENST00000570258 1512 ntAPPRIS ALT2 TSL 5 BASIC24.71■■□□□ 1.55
SCUBE1Q8IWY4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 ETS1-201ENST00000319397 2231 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 FAH-213ENST00000561421 1549 ntAPPRIS P1 TSL 1 (best) BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 MAGI2-215ENST00000628980 6212 ntTSL 5 BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC24.7■■□□□ 1.54
SCUBE1Q8IWY4 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 VAX2-201ENST00000234392 1147 ntAPPRIS P1 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 MIR6090-201ENST00000622481 60 ntBASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 LINC01003-201ENST00000564834 1764 ntBASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 ABHD17C-202ENST00000558464 1976 ntTSL 1 (best) BASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 HNRNPAB-205ENST00000506259 1674 ntAPPRIS ALT2 TSL 1 (best) BASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC24.69■■□□□ 1.54
SCUBE1Q8IWY4 BHLHE23-201ENST00000370346 1057 ntAPPRIS P1 BASIC24.68■■□□□ 1.54
SCUBE1Q8IWY4 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC24.68■■□□□ 1.54
SCUBE1Q8IWY4 DERA-201ENST00000428559 1705 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
SCUBE1Q8IWY4 FSD1-201ENST00000221856 1831 ntAPPRIS P1 TSL 1 (best) BASIC24.68■■□□□ 1.54
Retrieved 100 of 98,524 protein–RNA pairs in 10.2 ms