Protein–RNA interactions for Protein: Q3ZAQ7

VMA21, Vacuolar ATPase assembly integral membrane protein VMA21, humanhuman

Predictions only

Length 101 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21Q3ZAQ7 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC20.41■□□□□ 0.86
VMA21Q3ZAQ7 BOD1-206ENST00000480951 814 ntTSL 2 BASIC20.41■□□□□ 0.86
VMA21Q3ZAQ7 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.41■□□□□ 0.86
VMA21Q3ZAQ7 PLSCR3-214ENST00000619711 2066 ntTSL 5 BASIC20.41■□□□□ 0.86
VMA21Q3ZAQ7 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 SHOX2-201ENST00000389589 2072 ntAPPRIS P3 TSL 1 (best) BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 AC004080.1-201ENST00000523608 757 ntTSL 2 BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 EXOC3-209ENST00000512944 2825 ntAPPRIS P1 TSL 1 (best) BASIC20.4■□□□□ 0.86
VMA21Q3ZAQ7 EVC-203ENST00000509451 1960 ntTSL 1 (best) BASIC20.39■□□□□ 0.86
VMA21Q3ZAQ7 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC20.39■□□□□ 0.85
VMA21Q3ZAQ7 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.39■□□□□ 0.85
VMA21Q3ZAQ7 CALM3-209ENST00000597743 577 ntTSL 4 BASIC20.39■□□□□ 0.85
VMA21Q3ZAQ7 MFSD12-201ENST00000355415 2124 ntAPPRIS P3 TSL 1 (best) BASIC20.39■□□□□ 0.85
VMA21Q3ZAQ7 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VMA21Q3ZAQ7 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC20.38■□□□□ 0.85
VMA21Q3ZAQ7 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC20.38■□□□□ 0.85
VMA21Q3ZAQ7 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC20.38■□□□□ 0.85
VMA21Q3ZAQ7 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC20.38■□□□□ 0.85
VMA21Q3ZAQ7 TMEM187-201ENST00000369982 1880 ntAPPRIS P1 TSL 1 (best) BASIC20.37■□□□□ 0.85
VMA21Q3ZAQ7 LINC01003-201ENST00000564834 1764 ntBASIC20.37■□□□□ 0.85
VMA21Q3ZAQ7 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC20.37■□□□□ 0.85
VMA21Q3ZAQ7 CCDC61-204ENST00000595358 1817 ntAPPRIS P2 TSL 5 BASIC20.37■□□□□ 0.85
VMA21Q3ZAQ7 SCCPDH-201ENST00000366510 2503 ntAPPRIS P1 TSL 1 (best) BASIC20.36■□□□□ 0.85
VMA21Q3ZAQ7 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC20.36■□□□□ 0.85
VMA21Q3ZAQ7 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.35■□□□□ 0.85
VMA21Q3ZAQ7 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC20.35■□□□□ 0.85
VMA21Q3ZAQ7 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC20.35■□□□□ 0.85
VMA21Q3ZAQ7 HDHD5-202ENST00000336737 1799 ntAPPRIS ALT2 TSL 1 (best) BASIC20.35■□□□□ 0.85
VMA21Q3ZAQ7 KCNMA1-283ENST00000640523 5425 ntAPPRIS ALT2 TSL 5 BASIC20.35■□□□□ 0.85
VMA21Q3ZAQ7 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 TMEM55B-201ENST00000250489 1961 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 TNIP2-201ENST00000315423 1974 ntAPPRIS P3 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 TBL1X-201ENST00000217964 5871 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 REXO4-201ENST00000371935 1899 ntTSL 3 BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 RHEB-201ENST00000262187 2075 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 CCND3-203ENST00000372991 2085 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 SLCO3A1-201ENST00000318445 5115 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC20.34■□□□□ 0.85
VMA21Q3ZAQ7 NPDC1-201ENST00000371600 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 THRA-204ENST00000546243 1909 ntAPPRIS P1 TSL 2 BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 SHF-208ENST00000560734 1731 ntTSL 3 BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 TCFL5-201ENST00000217162 2453 ntAPPRIS ALT2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 TCFL5-202ENST00000335351 2456 ntAPPRIS P2 TSL 1 (best) BASIC20.32■□□□□ 0.84
VMA21Q3ZAQ7 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VMA21Q3ZAQ7 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VMA21Q3ZAQ7 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC20.31■□□□□ 0.84
VMA21Q3ZAQ7 CADPS-203ENST00000383710 5471 ntAPPRIS ALT2 TSL 1 (best) BASIC20.31■□□□□ 0.84
VMA21Q3ZAQ7 AC113189.4-201ENST00000575331 5553 ntTSL 1 (best) BASIC20.31■□□□□ 0.84
VMA21Q3ZAQ7 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.3■□□□□ 0.84
VMA21Q3ZAQ7 DUX4L29-201ENST00000425409 679 ntBASIC20.3■□□□□ 0.84
VMA21Q3ZAQ7 ANKRD65-205ENST00000537107 2190 ntAPPRIS P1 TSL 5 BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 IHH-201ENST00000295731 2023 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC20.29■□□□□ 0.84
VMA21Q3ZAQ7 AC018358.1-201ENST00000631079 1402 ntBASIC20.28■□□□□ 0.84
VMA21Q3ZAQ7 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC20.28■□□□□ 0.84
VMA21Q3ZAQ7 WTAP-206ENST00000621533 2109 ntAPPRIS P1 TSL 2 BASIC20.28■□□□□ 0.84
VMA21Q3ZAQ7 VEGFC-202ENST00000618562 2064 ntAPPRIS P1 TSL 1 (best) BASIC20.27■□□□□ 0.84
VMA21Q3ZAQ7 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.26■□□□□ 0.83
VMA21Q3ZAQ7 HINT2-201ENST00000259667 628 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VMA21Q3ZAQ7 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC20.26■□□□□ 0.83
VMA21Q3ZAQ7 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.26■□□□□ 0.83
VMA21Q3ZAQ7 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VMA21Q3ZAQ7 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC20.25■□□□□ 0.83
VMA21Q3ZAQ7 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC20.25■□□□□ 0.83
VMA21Q3ZAQ7 AC021231.2-201ENST00000594613 730 ntBASIC20.25■□□□□ 0.83
VMA21Q3ZAQ7 CTBP1-201ENST00000290921 2297 ntTSL 1 (best) BASIC20.25■□□□□ 0.83
VMA21Q3ZAQ7 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC20.25■□□□□ 0.83
VMA21Q3ZAQ7 PSMG1-201ENST00000331573 2154 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 ZDHHC16-201ENST00000345745 1519 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 MRPL9-201ENST00000368829 882 ntAPPRIS ALT2 TSL 2 BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 CCDC149-203ENST00000502801 1079 ntTSL 1 (best) BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 AL589765.4-201ENST00000512280 382 ntTSL 3 BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 AL121749.1-202ENST00000609313 2153 ntBASIC20.24■□□□□ 0.83
VMA21Q3ZAQ7 ROM1-201ENST00000278833 1878 ntAPPRIS P2 TSL 1 (best) BASIC20.23■□□□□ 0.83
VMA21Q3ZAQ7 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC20.23■□□□□ 0.83
VMA21Q3ZAQ7 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 BCAP31-201ENST00000345046 1589 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
VMA21Q3ZAQ7 HAND2-201ENST00000359562 2780 ntAPPRIS P1 TSL 1 (best) BASIC20.22■□□□□ 0.83
Retrieved 100 of 98,524 protein–RNA pairs in 68.1 ms