Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

Download Table  
Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 AC110285.7-201ENST00000624417 1536 ntBASIC18.65■□□□□ 0.58
NHLRC4P0CG21 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NHLRC4P0CG21 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NHLRC4P0CG21 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NHLRC4P0CG21 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 AC135983.2-203ENST00000454486 1613 ntBASIC18.63■□□□□ 0.57
NHLRC4P0CG21 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC4P0CG21 MIR219A2-201ENST00000608502 1504 ntBASIC18.6■□□□□ 0.57
NHLRC4P0CG21 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC4P0CG21 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC4P0CG21 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 WHAMMP2-203ENST00000563942 1603 ntBASIC18.59■□□□□ 0.57
NHLRC4P0CG21 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC4P0CG21 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.58■□□□□ 0.57
NHLRC4P0CG21 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.58■□□□□ 0.56
NHLRC4P0CG21 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC4P0CG21 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NHLRC4P0CG21 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC4P0CG21 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.55■□□□□ 0.56
NHLRC4P0CG21 AC127502.1-201ENST00000399971 1502 ntBASIC18.54■□□□□ 0.56
NHLRC4P0CG21 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 AL035685.1-201ENST00000636663 812 ntBASIC18.54■□□□□ 0.56
NHLRC4P0CG21 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 AC129492.7-201ENST00000622992 756 ntBASIC18.52■□□□□ 0.56
NHLRC4P0CG21 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NHLRC4P0CG21 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC4P0CG21 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC4P0CG21 AC007029.1-201ENST00000604183 313 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 46.5 ms