Protein–RNA interactions for Protein: P0CG21

NHLRC4, NHL-repeat-containing protein 4, humanhuman

Predicted RBP Predictions only

Length 123 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NHLRC4P0CG21 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 LACTBL1-202ENST00000618559 1500 ntAPPRIS ALT2 TSL 5 BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 PPP1R14A-201ENST00000301242 777 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 OXLD1-201ENST00000374741 620 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 GAL3ST3-203ENST00000527878 1599 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
NHLRC4P0CG21 AC110285.7-201ENST00000624417 1536 ntBASIC18.65■□□□□ 0.58
NHLRC4P0CG21 STUB1-205ENST00000565677 1560 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 C9orf50-201ENST00000372478 1620 ntAPPRIS P2 TSL 2 BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 TNFRSF12A-201ENST00000326577 1033 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 RPS2-210ENST00000530225 765 ntTSL 2 BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 NIT1-201ENST00000368007 1749 ntTSL 2 BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 TCEA2-204ENST00000395053 1733 ntTSL 1 (best) BASIC18.65■□□□□ 0.58
NHLRC4P0CG21 CAPNS1-201ENST00000246533 1918 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.58
NHLRC4P0CG21 ABL1-201ENST00000318560 5766 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
NHLRC4P0CG21 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.58
NHLRC4P0CG21 COQ2-202ENST00000311469 1641 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 FAM222B-205ENST00000577682 549 ntTSL 4 BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 PRRX2-201ENST00000372469 1311 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 MSX1-201ENST00000382723 1939 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 C19orf12-207ENST00000592153 1504 ntTSL 1 (best) BASIC18.64■□□□□ 0.57
NHLRC4P0CG21 GAL3ST1-204ENST00000402369 1712 ntAPPRIS P1 TSL 3 BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 LOR-201ENST00000368742 1230 ntAPPRIS P1 TSL 1 (best) BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 MAPK3-203ENST00000395199 1074 ntAPPRIS ALT2 TSL 1 (best) BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 AC135983.2-203ENST00000454486 1613 ntBASIC18.63■□□□□ 0.57
NHLRC4P0CG21 LRRC61-202ENST00000359623 1877 ntAPPRIS P1 TSL 2 BASIC18.63■□□□□ 0.57
NHLRC4P0CG21 ZIC2-201ENST00000376335 2983 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 FCGRT-217ENST00000599988 660 ntTSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 ATXN3-252ENST00000620536 1044 ntTSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 ATXN3-253ENST00000621269 936 ntTSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 MLST8-203ENST00000397124 1691 ntAPPRIS P3 TSL 5 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 ARL8A-204ENST00000614750 1727 ntTSL 3 BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 MSRB2-201ENST00000376510 1803 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 FMR1-219ENST00000621453 1864 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
NHLRC4P0CG21 SERP2-201ENST00000379179 784 ntAPPRIS P1 TSL 1 (best) BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 KRTAP5-5-201ENST00000399676 933 ntAPPRIS P1 BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 AC107214.1-201ENST00000457303 559 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 PLEKHJ1-204ENST00000586608 935 ntTSL 3 BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 TXNL4A-208ENST00000588162 752 ntTSL 2 BASIC18.61■□□□□ 0.57
NHLRC4P0CG21 MEX3D-201ENST00000402693 2850 ntAPPRIS P2 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC4P0CG21 MIR219A2-201ENST00000608502 1504 ntBASIC18.6■□□□□ 0.57
NHLRC4P0CG21 TTC39C-209ENST00000584250 1048 ntTSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC4P0CG21 AGAP1-202ENST00000336665 5427 ntAPPRIS P3 TSL 1 (best) BASIC18.6■□□□□ 0.57
NHLRC4P0CG21 CDC34-201ENST00000215574 1471 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 LSM6-202ENST00000502781 1352 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 IFI30-201ENST00000407280 1134 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 AQP1-203ENST00000409899 1009 ntTSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 FAHD1-204ENST00000615972 757 ntTSL 5 BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 WHAMMP2-203ENST00000563942 1603 ntBASIC18.59■□□□□ 0.57
NHLRC4P0CG21 BCL3-201ENST00000164227 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.59■□□□□ 0.57
NHLRC4P0CG21 GKAP1-203ENST00000376371 1778 ntAPPRIS P1 TSL 1 (best) BASIC18.58■□□□□ 0.57
NHLRC4P0CG21 PCSK6-216ENST00000615296 2921 ntTSL 5 BASIC18.58■□□□□ 0.57
NHLRC4P0CG21 HES4-204ENST00000484667 667 ntTSL 3 BASIC18.58■□□□□ 0.56
NHLRC4P0CG21 TMEM268-201ENST00000288502 2314 ntAPPRIS P3 TSL 1 (best) BASIC18.58■□□□□ 0.56
NHLRC4P0CG21 NADK2-202ENST00000381937 2243 ntAPPRIS P1 TSL 2 BASIC18.58■□□□□ 0.56
NHLRC4P0CG21 CMPK2-203ENST00000458098 1224 ntTSL 1 (best) BASIC18.57■□□□□ 0.56
NHLRC4P0CG21 HOMER3-202ENST00000392351 1557 ntAPPRIS P3 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 REST-210ENST00000638187 1334 ntTSL 5 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 WSB2-211ENST00000544233 2503 ntTSL 2 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 IZUMO4-202ENST00000395301 1021 ntAPPRIS ALT2 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 PSMG4-207ENST00000451246 824 ntTSL 3 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 GNG10-201ENST00000374293 1491 ntAPPRIS P1 TSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 PELI3-203ENST00000524466 1671 ntTSL 1 (best) BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 HOXB3-210ENST00000489475 1845 ntTSL 2 BASIC18.56■□□□□ 0.56
NHLRC4P0CG21 YAP1-204ENST00000526343 2393 ntTSL 5 BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 C20orf24-201ENST00000342422 896 ntTSL 2 BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 C20orf24-202ENST00000344795 1114 ntAPPRIS P1 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 MAP4K3-211ENST00000484274 407 ntTSL 2 BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 NPC2-207ENST00000555619 1035 ntAPPRIS P2 TSL 1 (best) BASIC18.55■□□□□ 0.56
NHLRC4P0CG21 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.55■□□□□ 0.56
NHLRC4P0CG21 AC127502.1-201ENST00000399971 1502 ntBASIC18.54■□□□□ 0.56
NHLRC4P0CG21 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 RSPO4-202ENST00000400634 722 ntTSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 UBE2I-213ENST00000566587 1098 ntAPPRIS P1 TSL 2 BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 SEC11C-204ENST00000587834 1202 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 AL035685.1-201ENST00000636663 812 ntBASIC18.54■□□□□ 0.56
NHLRC4P0CG21 SENP3-201ENST00000321337 2611 ntAPPRIS P1 TSL 1 (best) BASIC18.54■□□□□ 0.56
NHLRC4P0CG21 C7orf50-202ENST00000397098 2131 ntAPPRIS P2 TSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 TRIR-205ENST00000592273 783 ntTSL 3 BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 MAPK9-202ENST00000347470 1509 ntTSL 5 BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 ARPC5L-202ENST00000353214 2507 ntAPPRIS P1 TSL 2 BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 ESRRA-201ENST00000000442 2215 ntAPPRIS P3 TSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 UCK1-201ENST00000372208 2063 ntTSL 1 (best) BASIC18.53■□□□□ 0.56
NHLRC4P0CG21 WDR86-204ENST00000477459 1428 ntTSL 2 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 VIPR2-204ENST00000421760 717 ntTSL 3 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 ILDR2-208ENST00000529387 1238 ntTSL 5 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 PITX3-202ENST00000539804 1187 ntAPPRIS P1 TSL 5 BASIC18.52■□□□□ 0.56
NHLRC4P0CG21 AC129492.7-201ENST00000622992 756 ntBASIC18.52■□□□□ 0.56
NHLRC4P0CG21 SDCCAG3-202ENST00000357365 2304 ntAPPRIS P4 TSL 5 BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 ATP11B-209ENST00000493826 963 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 CARS2-201ENST00000257347 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 C14orf80-203ENST00000354560 1553 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 TAZ-201ENST00000369776 1596 ntTSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 CRELD2-203ENST00000404488 1577 ntAPPRIS ALT2 TSL 1 (best) BASIC18.51■□□□□ 0.55
NHLRC4P0CG21 CAPN10-208ENST00000404753 2570 ntAPPRIS ALT2 TSL 5 BASIC18.5■□□□□ 0.55
NHLRC4P0CG21 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC4P0CG21 RAB32-201ENST00000367495 1217 ntAPPRIS P1 TSL 1 (best) BASIC18.5■□□□□ 0.55
NHLRC4P0CG21 AC007029.1-201ENST00000604183 313 ntBASIC18.5■□□□□ 0.55
Retrieved 100 of 98,524 protein–RNA pairs in 15.3 ms