Protein–RNA interactions for Protein: O60896

RAMP3, Receptor activity-modifying protein 3, humanhuman

Predictions only

Length 148 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RAMP3O60896 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAMP3O60896 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAMP3O60896 ECI1-203ENST00000562238 948 ntTSL 1 (best) BASIC20.74■□□□□ 0.91
RAMP3O60896 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC20.74■□□□□ 0.91
RAMP3O60896 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC20.74■□□□□ 0.91
RAMP3O60896 GSX1-201ENST00000302945 1663 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAMP3O60896 RPS2-209ENST00000529806 993 ntTSL 3 BASIC20.73■□□□□ 0.91
RAMP3O60896 TBCC-201ENST00000372876 1616 ntAPPRIS P1 BASIC20.73■□□□□ 0.91
RAMP3O60896 CACNG7-203ENST00000391767 2688 ntAPPRIS P1 TSL 5 BASIC20.73■□□□□ 0.91
RAMP3O60896 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAMP3O60896 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC20.73■□□□□ 0.91
RAMP3O60896 C14orf80-202ENST00000334656 1358 ntAPPRIS ALT2 TSL 2 BASIC20.72■□□□□ 0.91
RAMP3O60896 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC20.72■□□□□ 0.91
RAMP3O60896 AJAP1-201ENST00000378190 2383 ntAPPRIS P1 TSL 5 BASIC20.72■□□□□ 0.91
RAMP3O60896 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC20.72■□□□□ 0.91
RAMP3O60896 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC20.71■□□□□ 0.91
RAMP3O60896 ARMC10-205ENST00000428183 2445 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAMP3O60896 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC20.71■□□□□ 0.91
RAMP3O60896 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAMP3O60896 CIB2-201ENST00000258930 1598 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAMP3O60896 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC20.71■□□□□ 0.91
RAMP3O60896 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC20.7■□□□□ 0.91
RAMP3O60896 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC20.7■□□□□ 0.91
RAMP3O60896 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC20.7■□□□□ 0.9
RAMP3O60896 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC20.7■□□□□ 0.9
RAMP3O60896 ADGRB2-204ENST00000398542 5176 ntTSL 5 BASIC20.7■□□□□ 0.9
RAMP3O60896 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC20.69■□□□□ 0.9
RAMP3O60896 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAMP3O60896 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC20.69■□□□□ 0.9
RAMP3O60896 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC20.69■□□□□ 0.9
RAMP3O60896 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC20.69■□□□□ 0.9
RAMP3O60896 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC20.69■□□□□ 0.9
RAMP3O60896 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC20.68■□□□□ 0.9
RAMP3O60896 CREM-210ENST00000374721 2020 ntTSL 5 BASIC20.68■□□□□ 0.9
RAMP3O60896 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAMP3O60896 LMTK3-202ENST00000600059 5113 ntAPPRIS ALT2 TSL 2 BASIC20.68■□□□□ 0.9
RAMP3O60896 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC20.68■□□□□ 0.9
RAMP3O60896 AC044849.2-201ENST00000606596 710 ntBASIC20.68■□□□□ 0.9
RAMP3O60896 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC20.68■□□□□ 0.9
RAMP3O60896 AP002414.2-202ENST00000590929 1450 ntBASIC20.68■□□□□ 0.9
RAMP3O60896 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAMP3O60896 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC20.67■□□□□ 0.9
RAMP3O60896 MLEC-202ENST00000412616 841 ntTSL 3 BASIC20.67■□□□□ 0.9
RAMP3O60896 AC005559.1-201ENST00000589661 871 ntBASIC20.67■□□□□ 0.9
RAMP3O60896 KIAA2013-201ENST00000376572 2815 ntAPPRIS P1 TSL 1 (best) BASIC20.67■□□□□ 0.9
RAMP3O60896 PKM-203ENST00000389093 2279 ntTSL 5 BASIC20.66■□□□□ 0.9
RAMP3O60896 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAMP3O60896 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC20.66■□□□□ 0.9
RAMP3O60896 AC087741.3-201ENST00000624270 1347 ntBASIC20.66■□□□□ 0.9
RAMP3O60896 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC20.66■□□□□ 0.9
RAMP3O60896 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC20.66■□□□□ 0.9
RAMP3O60896 PWWP2B-201ENST00000305233 2651 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAMP3O60896 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC20.65■□□□□ 0.9
RAMP3O60896 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC20.65■□□□□ 0.9
RAMP3O60896 TMEM266-201ENST00000388942 2520 ntAPPRIS P1 TSL 5 BASIC20.64■□□□□ 0.9
RAMP3O60896 FOXG1-201ENST00000313071 4890 ntAPPRIS P1 BASIC20.64■□□□□ 0.89
RAMP3O60896 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC20.64■□□□□ 0.89
RAMP3O60896 DUX4L28-201ENST00000623687 678 ntBASIC20.64■□□□□ 0.89
RAMP3O60896 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC20.64■□□□□ 0.89
RAMP3O60896 MBD2-201ENST00000256429 5188 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 RCE1-201ENST00000309657 1485 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 ABHD17AP4-201ENST00000411545 909 ntBASIC20.63■□□□□ 0.89
RAMP3O60896 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC20.63■□□□□ 0.89
RAMP3O60896 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 SPTSSA-201ENST00000298130 2777 ntAPPRIS P1 TSL 1 (best) BASIC20.63■□□□□ 0.89
RAMP3O60896 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC20.62■□□□□ 0.89
RAMP3O60896 HSPB11-201ENST00000194214 915 ntAPPRIS P1 TSL 1 (best) BASIC20.62■□□□□ 0.89
RAMP3O60896 NKIRAS2-202ENST00000316082 833 ntTSL 5 BASIC20.62■□□□□ 0.89
RAMP3O60896 COPRS-202ENST00000378634 1041 ntTSL 2 BASIC20.62■□□□□ 0.89
RAMP3O60896 AC135983.2-203ENST00000454486 1613 ntBASIC20.62■□□□□ 0.89
RAMP3O60896 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC20.62■□□□□ 0.89
RAMP3O60896 MEST-211ENST00000437945 1455 ntTSL 5 BASIC20.62■□□□□ 0.89
RAMP3O60896 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC20.61■□□□□ 0.89
RAMP3O60896 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC20.61■□□□□ 0.89
RAMP3O60896 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC20.61■□□□□ 0.89
RAMP3O60896 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC20.61■□□□□ 0.89
RAMP3O60896 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC20.6■□□□□ 0.89
RAMP3O60896 PLBD2-202ENST00000545182 2321 ntTSL 2 BASIC20.6■□□□□ 0.89
RAMP3O60896 SHF-207ENST00000560540 2062 ntTSL 5 BASIC20.6■□□□□ 0.89
RAMP3O60896 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC20.6■□□□□ 0.89
RAMP3O60896 NXNL1-201ENST00000301944 946 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAMP3O60896 MXI1-201ENST00000239007 2424 ntAPPRIS ALT1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAMP3O60896 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC20.6■□□□□ 0.89
RAMP3O60896 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC20.6■□□□□ 0.89
RAMP3O60896 SMDT1-201ENST00000331479 1567 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAMP3O60896 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC20.59■□□□□ 0.89
RAMP3O60896 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAMP3O60896 WHAMMP2-203ENST00000563942 1603 ntBASIC20.59■□□□□ 0.89
RAMP3O60896 PLPPR3-201ENST00000359894 2387 ntAPPRIS P3 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAMP3O60896 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC20.59■□□□□ 0.89
RAMP3O60896 OTUD5-202ENST00000376488 2692 ntAPPRIS ALT1 TSL 1 (best) BASIC20.58■□□□□ 0.89
RAMP3O60896 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC20.58■□□□□ 0.89
RAMP3O60896 MIR7108-201ENST00000614319 87 ntBASIC20.58■□□□□ 0.89
RAMP3O60896 AKAP17A-202ENST00000381261 2187 ntAPPRIS ALT2 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAMP3O60896 RHOQ-201ENST00000238738 2975 ntAPPRIS P1 TSL 1 (best) BASIC20.58■□□□□ 0.88
RAMP3O60896 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC20.57■□□□□ 0.88
RAMP3O60896 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC20.57■□□□□ 0.88
Retrieved 100 of 98,524 protein–RNA pairs in 135.7 ms