Protein–RNA interactions for Protein: O14678

ABCD4, ATP-binding cassette sub-family D member 4, humanhuman

Predictions only

Length 606 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
ABCD4O14678 R3HDM4-208ENST00000626716 138 ntTSL 5 BASIC22.28■■□□□ 1.16
ABCD4O14678 BTBD7-201ENST00000298896 2621 ntTSL 1 (best) BASIC22.27■■□□□ 1.16
ABCD4O14678 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC22.27■■□□□ 1.16
ABCD4O14678 AC092902.2-221ENST00000628476 965 ntTSL 5 BASIC22.27■■□□□ 1.16
ABCD4O14678 TPM2-203ENST00000378292 2147 ntAPPRIS ALT1 TSL 1 (best) BASIC22.27■■□□□ 1.15
ABCD4O14678 ST7-AS1-201ENST00000456775 1889 ntBASIC22.26■■□□□ 1.15
ABCD4O14678 MNX1-201ENST00000252971 2174 ntAPPRIS P3 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCD4O14678 UBAC1-201ENST00000371756 1867 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCD4O14678 PICK1-201ENST00000356976 2055 ntAPPRIS P1 TSL 1 (best) BASIC22.26■■□□□ 1.15
ABCD4O14678 ITGA9-203ENST00000422441 2282 ntTSL 1 (best) BASIC22.26■■□□□ 1.15
ABCD4O14678 ARL6IP4-211ENST00000454885 1318 ntAPPRIS ALT2 TSL 1 (best) BASIC22.25■■□□□ 1.15
ABCD4O14678 CCDC160-202ENST00000517294 1790 ntAPPRIS P1 TSL 5 BASIC22.25■■□□□ 1.15
ABCD4O14678 VWA1-201ENST00000338660 2147 ntTSL 2 BASIC22.24■■□□□ 1.15
ABCD4O14678 CLDND1-226ENST00000513287 999 ntAPPRIS P1 TSL 2 BASIC22.24■■□□□ 1.15
ABCD4O14678 ARL8A-201ENST00000272217 1793 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCD4O14678 FAAH-201ENST00000243167 2094 ntAPPRIS P1 TSL 1 (best) BASIC22.24■■□□□ 1.15
ABCD4O14678 ZNF787-203ENST00000610935 1925 ntAPPRIS P1 TSL 1 (best) BASIC22.23■■□□□ 1.15
ABCD4O14678 TMEM147-202ENST00000392204 935 ntTSL 2 BASIC22.23■■□□□ 1.15
ABCD4O14678 GATA3-AS1-201ENST00000355358 2214 ntTSL 2 BASIC22.23■■□□□ 1.15
ABCD4O14678 COL13A1-210ENST00000517713 2007 ntAPPRIS ALT2 TSL 5 BASIC22.23■■□□□ 1.15
ABCD4O14678 ZNF513-201ENST00000323703 2139 ntAPPRIS P1 TSL 1 (best) BASIC22.22■■□□□ 1.15
ABCD4O14678 AC009041.3-201ENST00000564390 879 ntTSL 5 BASIC22.22■■□□□ 1.15
ABCD4O14678 TMEM9-201ENST00000367330 1959 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ABCD4O14678 MARCKSL1-201ENST00000329421 1699 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ABCD4O14678 U2AF1-201ENST00000291552 962 ntAPPRIS P3 TSL 1 (best) BASIC22.21■■□□□ 1.15
ABCD4O14678 RPS20-211ENST00000524349 752 ntTSL 1 (best) BASIC22.21■■□□□ 1.15
ABCD4O14678 U2AF1L5-202ENST00000619610 813 ntAPPRIS ALT2 TSL 1 (best) BASIC22.21■■□□□ 1.15
ABCD4O14678 HOXB3-201ENST00000311626 2642 ntAPPRIS P1 TSL 1 (best) BASIC22.21■■□□□ 1.15
ABCD4O14678 C9orf40-201ENST00000376854 2327 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ABCD4O14678 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC22.2■■□□□ 1.14
ABCD4O14678 BCL7C-201ENST00000215115 1740 ntAPPRIS P1 TSL 1 (best) BASIC22.2■■□□□ 1.14
ABCD4O14678 SHOX2-204ENST00000483851 1866 ntAPPRIS ALT2 TSL 2 BASIC22.2■■□□□ 1.14
ABCD4O14678 GABRA5-203ENST00000400081 2761 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ABCD4O14678 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC22.19■■□□□ 1.14
ABCD4O14678 SLC16A11-201ENST00000308009 1803 ntAPPRIS P2 TSL 1 (best) BASIC22.19■■□□□ 1.14
ABCD4O14678 TSPAN33-201ENST00000486685 1863 ntAPPRIS P1 TSL 1 (best) BASIC22.18■■□□□ 1.14
ABCD4O14678 POLR3H-201ENST00000337566 1330 ntTSL 1 (best) BASIC22.18■■□□□ 1.14
ABCD4O14678 CLTA-207ENST00000470744 1102 ntTSL 2 BASIC22.18■■□□□ 1.14
ABCD4O14678 CRNDE-206ENST00000559432 587 ntTSL 3 BASIC22.18■■□□□ 1.14
ABCD4O14678 RDX-210ENST00000530301 1549 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 BCL7B-202ENST00000411832 1458 ntTSL 2 BASIC22.17■■□□□ 1.14
ABCD4O14678 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 NPB-202ENST00000573081 2154 ntAPPRIS ALT2 BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-202ENST00000324450 954 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 SURF1-201ENST00000371974 1093 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-203ENST00000372055 1286 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 TSPAN4-207ENST00000397411 1025 ntAPPRIS P1 TSL 2 BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-213ENST00000482630 1146 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 ABHD17AP3-201ENST00000503096 1137 ntBASIC22.17■■□□□ 1.14
ABCD4O14678 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-227ENST00000615393 984 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 SURF1-205ENST00000615505 991 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-228ENST00000617771 1116 ntTSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-229ENST00000621747 1116 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-230ENST00000640482 1065 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 VEGFA-232ENST00000640653 1170 ntAPPRIS ALT2 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 HOOK2-201ENST00000264827 2603 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 IRX1-201ENST00000302006 1858 ntAPPRIS P1 TSL 1 (best) BASIC22.17■■□□□ 1.14
ABCD4O14678 ESRRA-203ENST00000406310 2218 ntAPPRIS ALT1 TSL 1 (best) BASIC22.16■■□□□ 1.14
ABCD4O14678 CGREF1-203ENST00000402394 1906 ntAPPRIS P2 TSL 2 BASIC22.16■■□□□ 1.14
ABCD4O14678 EIF5A-208ENST00000573542 1089 ntAPPRIS P1 TSL 2 BASIC22.16■■□□□ 1.14
ABCD4O14678 HSD17B1P1-201ENST00000590052 955 ntBASIC22.16■■□□□ 1.14
ABCD4O14678 AMZ2-201ENST00000359783 1722 ntTSL 5 BASIC22.16■■□□□ 1.14
ABCD4O14678 AC073111.5-206ENST00000642087 859 ntAPPRIS P1 BASIC22.15■■□□□ 1.14
ABCD4O14678 SLC35D2-201ENST00000253270 1613 ntAPPRIS P1 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCD4O14678 DCBLD1-201ENST00000296955 1979 ntAPPRIS P2 TSL 1 (best) BASIC22.15■■□□□ 1.14
ABCD4O14678 TSPAN3-203ENST00000424443 1530 ntTSL 2 BASIC22.15■■□□□ 1.14
ABCD4O14678 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC22.14■■□□□ 1.14
ABCD4O14678 PPP4R4-202ENST00000328839 876 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCD4O14678 UBA52-204ENST00000595158 743 ntAPPRIS P1 TSL 3 BASIC22.14■■□□□ 1.13
ABCD4O14678 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCD4O14678 AC110285.7-201ENST00000624417 1536 ntBASIC22.14■■□□□ 1.13
ABCD4O14678 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC22.14■■□□□ 1.13
ABCD4O14678 CSNK1E-203ENST00000396832 2791 ntAPPRIS P1 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCD4O14678 SECTM1-201ENST00000269389 2235 ntAPPRIS P2 TSL 1 (best) BASIC22.14■■□□□ 1.13
ABCD4O14678 S1PR4-201ENST00000246115 1565 ntAPPRIS P1 BASIC22.13■■□□□ 1.13
ABCD4O14678 INPP4A-203ENST00000409463 1565 ntTSL 1 (best) BASIC22.13■■□□□ 1.13
ABCD4O14678 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC22.13■■□□□ 1.13
ABCD4O14678 PRELID2-207ENST00000511435 1894 ntAPPRIS ALT1 TSL 2 BASIC22.13■■□□□ 1.13
ABCD4O14678 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC22.12■■□□□ 1.13
ABCD4O14678 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC22.12■■□□□ 1.13
ABCD4O14678 ST6GALNAC6-205ENST00000373146 2460 ntAPPRIS P3 TSL 1 (best) BASIC22.12■■□□□ 1.13
ABCD4O14678 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC22.11■■□□□ 1.13
ABCD4O14678 EID2-201ENST00000390658 1629 ntAPPRIS P1 BASIC22.11■■□□□ 1.13
ABCD4O14678 MRPL51-201ENST00000229238 1234 ntAPPRIS P1 TSL 1 (best) BASIC22.11■■□□□ 1.13
ABCD4O14678 AP000911.3-201ENST00000526377 1130 ntTSL 3 BASIC22.11■■□□□ 1.13
ABCD4O14678 AC008813.1-201ENST00000536597 885 ntBASIC22.11■■□□□ 1.13
ABCD4O14678 MEST-211ENST00000437945 1455 ntTSL 5 BASIC22.1■■□□□ 1.13
ABCD4O14678 SP8-201ENST00000361443 1714 ntAPPRIS P3 TSL 1 (best) BASIC22.1■■□□□ 1.13
ABCD4O14678 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC22.09■■□□□ 1.13
ABCD4O14678 ITPKA-201ENST00000260386 1824 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCD4O14678 LAGE3-201ENST00000357360 949 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCD4O14678 TPT1-202ENST00000379055 948 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCD4O14678 FAM168B-201ENST00000389915 944 ntAPPRIS P1 TSL 3 BASIC22.09■■□□□ 1.13
ABCD4O14678 LINC01896-206ENST00000575722 1256 ntTSL 2 BASIC22.09■■□□□ 1.13
ABCD4O14678 SRP68-213ENST00000629930 165 ntTSL 5 BASIC22.09■■□□□ 1.13
ABCD4O14678 TMEM55B-202ENST00000398020 1696 ntAPPRIS ALT1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCD4O14678 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCD4O14678 SLC16A8-201ENST00000320521 1878 ntAPPRIS P1 TSL 1 (best) BASIC22.09■■□□□ 1.13
ABCD4O14678 RUNX2-211ENST00000625924 1458 ntAPPRIS ALT2 TSL 1 (best) BASIC22.09■■□□□ 1.13
Retrieved 100 of 98,524 protein–RNA pairs in 15.5 ms