Protein–RNA interactions for Protein: A0A0B4J279

TRAV21, T-cell receptor alpha variable 21 (Fragment), humanhuman

Predictions only

Length 112 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV21A0A0B4J279 AP002414.2-202ENST00000590929 1450 ntBASIC18.78■□□□□ 0.6
TRAV21A0A0B4J279 VEGFA-231ENST00000640499 1188 ntAPPRIS P3 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV21A0A0B4J279 SV2B-203ENST00000545111 2099 ntTSL 2 BASIC18.78■□□□□ 0.6
TRAV21A0A0B4J279 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.78■□□□□ 0.6
TRAV21A0A0B4J279 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV21A0A0B4J279 CHML-205ENST00000638160 705 ntTSL 3 BASIC18.77■□□□□ 0.6
TRAV21A0A0B4J279 QDPR-201ENST00000281243 1648 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV21A0A0B4J279 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV21A0A0B4J279 LDLRAD4-218ENST00000592991 1640 ntTSL 1 (best) BASIC18.77■□□□□ 0.6
TRAV21A0A0B4J279 HOMER1-202ENST00000334082 5881 ntAPPRIS P1 TSL 1 (best) BASIC18.77■□□□□ 0.59
TRAV21A0A0B4J279 MAGI2-201ENST00000354212 6880 ntAPPRIS P3 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV21A0A0B4J279 GSR-206ENST00000546342 1482 ntAPPRIS ALT2 TSL 1 (best) BASIC18.76■□□□□ 0.59
TRAV21A0A0B4J279 TAZ-213ENST00000601016 1889 ntTSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV21A0A0B4J279 MKRN1-202ENST00000443720 1601 ntAPPRIS ALT2 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV21A0A0B4J279 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC18.75■□□□□ 0.59
TRAV21A0A0B4J279 RPUSD1-208ENST00000567114 1835 ntTSL 2 BASIC18.74■□□□□ 0.59
TRAV21A0A0B4J279 MEST-211ENST00000437945 1455 ntTSL 5 BASIC18.74■□□□□ 0.59
TRAV21A0A0B4J279 MZT2B-202ENST00000409255 769 ntAPPRIS ALT2 TSL 5 BASIC18.74■□□□□ 0.59
TRAV21A0A0B4J279 NXPH3-201ENST00000328741 2179 ntAPPRIS P1 TSL 1 (best) BASIC18.74■□□□□ 0.59
TRAV21A0A0B4J279 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC18.73■□□□□ 0.59
TRAV21A0A0B4J279 RPUSD1-207ENST00000565809 1918 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV21A0A0B4J279 GFRA4-202ENST00000319242 900 ntAPPRIS P4 TSL 1 (best) BASIC18.73■□□□□ 0.59
TRAV21A0A0B4J279 AC092755.2-201ENST00000560199 402 ntTSL 3 BASIC18.73■□□□□ 0.59
TRAV21A0A0B4J279 TXNL4A-210ENST00000591711 669 ntTSL 2 BASIC18.73■□□□□ 0.59
TRAV21A0A0B4J279 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC18.73■□□□□ 0.59
TRAV21A0A0B4J279 KLC2-205ENST00000394078 1557 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV21A0A0B4J279 MAZ-205ENST00000562337 1574 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV21A0A0B4J279 OTUD5-208ENST00000610466 2487 ntTSL 5 BASIC18.72■□□□□ 0.59
TRAV21A0A0B4J279 H2AFV-205ENST00000381124 628 ntTSL 3 BASIC18.72■□□□□ 0.59
TRAV21A0A0B4J279 KIAA1456-206ENST00000528753 2392 ntTSL 2 BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 TERF2-207ENST00000567296 1129 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 NKX2-1-204ENST00000522719 1417 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 ABL2-203ENST00000392043 2140 ntTSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC18.71■□□□□ 0.59
TRAV21A0A0B4J279 ARTN-203ENST00000414809 1943 ntAPPRIS P4 TSL 3 BASIC18.7■□□□□ 0.58
TRAV21A0A0B4J279 AHSA2-201ENST00000357022 2437 ntTSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV21A0A0B4J279 SLC9A3R2-201ENST00000424542 2194 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV21A0A0B4J279 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC18.7■□□□□ 0.58
TRAV21A0A0B4J279 GTF3C4-202ENST00000483873 1417 ntTSL 3 BASIC18.69■□□□□ 0.58
TRAV21A0A0B4J279 AC027237.3-202ENST00000558617 1778 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV21A0A0B4J279 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC18.69■□□□□ 0.58
TRAV21A0A0B4J279 RASL10A-202ENST00000401450 1720 ntTSL 2 BASIC18.69■□□□□ 0.58
TRAV21A0A0B4J279 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18.69■□□□□ 0.58
TRAV21A0A0B4J279 PSMG4-202ENST00000380305 489 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV21A0A0B4J279 AC005559.1-201ENST00000589661 871 ntBASIC18.68■□□□□ 0.58
TRAV21A0A0B4J279 UBE2S-203ENST00000589978 496 ntTSL 5 BASIC18.68■□□□□ 0.58
TRAV21A0A0B4J279 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC18.68■□□□□ 0.58
TRAV21A0A0B4J279 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 ZDHHC16-204ENST00000370842 1877 ntAPPRIS ALT1 TSL 5 BASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 HSD11B1L-202ENST00000339423 1660 ntAPPRIS P3 TSL 1 (best) BASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 CCDC136-206ENST00000464832 1720 ntAPPRIS ALT2 TSL 5 BASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 AC108673.1-201ENST00000510422 1159 ntBASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 INAFM1-201ENST00000552360 1255 ntAPPRIS P1 BASIC18.67■□□□□ 0.58
TRAV21A0A0B4J279 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 C16orf59-202ENST00000483320 1709 ntAPPRIS ALT2 TSL 2 BASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 TSEN34-203ENST00000396388 1349 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 AC135983.2-203ENST00000454486 1613 ntBASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 AC018358.1-201ENST00000631079 1402 ntBASIC18.66■□□□□ 0.58
TRAV21A0A0B4J279 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.65■□□□□ 0.58
TRAV21A0A0B4J279 DNAJB2-202ENST00000392086 1946 ntAPPRIS P1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV21A0A0B4J279 NAA50-207ENST00000493900 962 ntAPPRIS ALT1 TSL 2 BASIC18.65■□□□□ 0.58
TRAV21A0A0B4J279 THAP4-204ENST00000407315 2367 ntAPPRIS P1 TSL 1 (best) BASIC18.65■□□□□ 0.58
TRAV21A0A0B4J279 EI24-212ENST00000615917 1407 ntTSL 2 BASIC18.65■□□□□ 0.58
TRAV21A0A0B4J279 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.64■□□□□ 0.58
TRAV21A0A0B4J279 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.64■□□□□ 0.58
TRAV21A0A0B4J279 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC18.64■□□□□ 0.57
TRAV21A0A0B4J279 SHF-207ENST00000560540 2062 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV21A0A0B4J279 POLR1D-201ENST00000302979 1166 ntAPPRIS P2 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV21A0A0B4J279 PPP1R14B-201ENST00000309318 982 ntAPPRIS P1 TSL 1 (best) BASIC18.64■□□□□ 0.57
TRAV21A0A0B4J279 MARCH2-202ENST00000381035 1192 ntTSL 5 BASIC18.64■□□□□ 0.57
TRAV21A0A0B4J279 HNRNPLP2-201ENST00000568980 1570 ntBASIC18.64■□□□□ 0.57
TRAV21A0A0B4J279 BBC3-204ENST00000449228 1827 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV21A0A0B4J279 FAM189B-210ENST00000621094 1335 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV21A0A0B4J279 LMO2-201ENST00000257818 2294 ntTSL 1 (best) BASIC18.63■□□□□ 0.57
TRAV21A0A0B4J279 OXSR1-203ENST00000446845 1908 ntTSL 5 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 FAM66E-202ENST00000533615 2087 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 MAD2L2-205ENST00000376669 864 ntTSL 3 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 DTNBP1-202ENST00000344537 1403 ntAPPRIS P1 TSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 GKAP1-202ENST00000376365 1511 ntTSL 1 (best) BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC18.62■□□□□ 0.57
TRAV21A0A0B4J279 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 RFLNA-205ENST00000546355 2354 ntAPPRIS ALT1 TSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 PKM-203ENST00000389093 2279 ntTSL 5 BASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 RCC1L-205ENST00000618035 1409 ntTSL 1 (best) BASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 JMJD8-202ENST00000562111 823 ntTSL 2 BASIC18.61■□□□□ 0.57
TRAV21A0A0B4J279 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV21A0A0B4J279 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV21A0A0B4J279 TLE6-201ENST00000246112 2100 ntAPPRIS ALT2 TSL 1 (best) BASIC18.6■□□□□ 0.57
TRAV21A0A0B4J279 CPNE1-202ENST00000352393 2147 ntAPPRIS P1 TSL 1 (best) BASIC18.6■□□□□ 0.57
Retrieved 100 of 98,524 protein–RNA pairs in 102.9 ms