Protein–RNA interactions for Protein: A0A0B4J272

TRAV24, T-cell receptor alpha variable 24 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRAV24A0A0B4J272 MAPK8IP1P1-201ENST00000574657 1439 ntBASIC21.32■■□□□ 1
TRAV24A0A0B4J272 HDGFL1-201ENST00000510882 2174 ntAPPRIS P1 BASIC21.32■■□□□ 1
TRAV24A0A0B4J272 CIB2-204ENST00000557846 934 ntTSL 3 BASIC21.32■■□□□ 1
TRAV24A0A0B4J272 MFSD12-202ENST00000389395 2039 ntAPPRIS ALT2 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV24A0A0B4J272 ADAT3-201ENST00000329478 1620 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV24A0A0B4J272 ZNF219-201ENST00000360947 3071 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV24A0A0B4J272 SLC25A6-201ENST00000381401 2062 ntAPPRIS P1 TSL 1 (best) BASIC21.32■■□□□ 1
TRAV24A0A0B4J272 C11orf80-204ENST00000525908 2135 ntAPPRIS P3 TSL 2 BASIC21.31■■□□□ 1
TRAV24A0A0B4J272 VIPR2-203ENST00000402066 1926 ntAPPRIS ALT2 TSL 5 BASIC21.3■■□□□ 1
TRAV24A0A0B4J272 HDGF-201ENST00000357325 2380 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV24A0A0B4J272 HTR6-201ENST00000289753 1984 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV24A0A0B4J272 SMIM12-205ENST00000456842 918 ntAPPRIS P1 TSL 2 BASIC21.29■■□□□ 1
TRAV24A0A0B4J272 SNX15-202ENST00000377244 1939 ntAPPRIS P1 TSL 1 (best) BASIC21.29■■□□□ 1
TRAV24A0A0B4J272 RP9P-201ENST00000381639 1303 ntTSL 1 (best) BASIC21.29■■□□□ 1
TRAV24A0A0B4J272 NDEL1-202ENST00000380025 2181 ntTSL 5 BASIC21.29■■□□□ 1
TRAV24A0A0B4J272 HDAC11-206ENST00000405025 576 ntTSL 4 BASIC21.28■■□□□ 1
TRAV24A0A0B4J272 AP000911.1-206ENST00000531938 711 ntTSL 3 BASIC21.28■■□□□ 1
TRAV24A0A0B4J272 COX4I1-203ENST00000562336 873 ntAPPRIS P1 TSL 5 BASIC21.28■■□□□ 1
TRAV24A0A0B4J272 CALM3-209ENST00000597743 577 ntTSL 4 BASIC21.28■■□□□ 1
TRAV24A0A0B4J272 AC044849.2-201ENST00000606596 710 ntBASIC21.28■■□□□ 1
TRAV24A0A0B4J272 ZNF768-201ENST00000380412 2315 ntAPPRIS P2 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV24A0A0B4J272 ZNF639-209ENST00000496856 2033 ntAPPRIS P1 TSL 1 (best) BASIC21.28■■□□□ 1
TRAV24A0A0B4J272 FADD-201ENST00000301838 1841 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV24A0A0B4J272 RTN2-202ENST00000344680 2063 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV24A0A0B4J272 CAMKK1-201ENST00000158166 2459 ntTSL 1 (best) BASIC21.27■■□□□ 1
TRAV24A0A0B4J272 AC004837.3-201ENST00000420748 565 ntTSL 4 BASIC21.27■■□□□ 1
TRAV24A0A0B4J272 SNTB1-202ENST00000517992 2273 ntAPPRIS P1 TSL 1 (best) BASIC21.27■■□□□ 1
TRAV24A0A0B4J272 NAPA-201ENST00000263354 1839 ntAPPRIS P1 TSL 1 (best) BASIC21.27■□□□□ 0.99
TRAV24A0A0B4J272 NRBF2-202ENST00000435510 1816 ntTSL 2 BASIC21.27■□□□□ 0.99
TRAV24A0A0B4J272 TMEM251-202ENST00000415050 1303 ntTSL 2 BASIC21.27■□□□□ 0.99
TRAV24A0A0B4J272 VEGFA-207ENST00000413642 1197 ntAPPRIS ALT2 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV24A0A0B4J272 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV24A0A0B4J272 ACAA1-220ENST00000627515 1862 ntTSL 5 BASIC21.26■□□□□ 0.99
TRAV24A0A0B4J272 JAG2-201ENST00000331782 5835 ntAPPRIS P1 TSL 1 (best) BASIC21.26■□□□□ 0.99
TRAV24A0A0B4J272 LINC02323-201ENST00000559946 1603 ntTSL 3 BASIC21.26■□□□□ 0.99
TRAV24A0A0B4J272 SRSF9-201ENST00000229390 1201 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV24A0A0B4J272 FEZ1-201ENST00000278919 1748 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV24A0A0B4J272 DNAJC21-201ENST00000342382 2309 ntAPPRIS P1 TSL 1 (best) BASIC21.25■□□□□ 0.99
TRAV24A0A0B4J272 FLJ37453-201ENST00000317122 2473 ntTSL 2 BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 KCNJ4-201ENST00000303592 2065 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 DNLZ-201ENST00000371738 724 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 ZNF470-206ENST00000601902 1640 ntTSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 MRAP2-201ENST00000257776 2153 ntAPPRIS P1 TSL 1 (best) BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 RAB40C-204ENST00000538492 2569 ntAPPRIS P1 TSL 2 BASIC21.24■□□□□ 0.99
TRAV24A0A0B4J272 UCK1-204ENST00000372215 2167 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV24A0A0B4J272 FRAT2-201ENST00000371019 2213 ntAPPRIS P1 BASIC21.23■□□□□ 0.99
TRAV24A0A0B4J272 RCOR3-202ENST00000367006 2525 ntTSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV24A0A0B4J272 CYB5R3-201ENST00000352397 2124 ntAPPRIS P1 TSL 1 (best) BASIC21.23■□□□□ 0.99
TRAV24A0A0B4J272 AC018358.1-201ENST00000631079 1402 ntBASIC21.22■□□□□ 0.99
TRAV24A0A0B4J272 VEGFA-226ENST00000611736 1239 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV24A0A0B4J272 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV24A0A0B4J272 TMEM150A-202ENST00000334462 1518 ntAPPRIS P1 TSL 1 (best) BASIC21.22■□□□□ 0.99
TRAV24A0A0B4J272 MAZ-208ENST00000563402 1461 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAV24A0A0B4J272 MAZ-210ENST00000566906 1455 ntTSL 5 BASIC21.21■□□□□ 0.99
TRAV24A0A0B4J272 EIF5A-202ENST00000336458 1511 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV24A0A0B4J272 PIK3R2-207ENST00000617130 2187 ntAPPRIS P1 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV24A0A0B4J272 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC21.21■□□□□ 0.99
TRAV24A0A0B4J272 CCKBR-201ENST00000334619 2121 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 BOD1-201ENST00000285908 1286 ntTSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 H2AFV-204ENST00000350771 687 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 MAD2L2-207ENST00000376692 1118 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 BOD1-206ENST00000480951 814 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 AC104109.3-201ENST00000519718 483 ntAPPRIS P1 TSL 5 BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 SYT12-205ENST00000527043 1661 ntAPPRIS P1 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 CD6-206ENST00000452451 1782 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 PHF23-205ENST00000571362 1768 ntTSL 2 BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 FAM120AOS-202ENST00000423591 1800 ntAPPRIS ALT2 TSL 1 (best) BASIC21.2■□□□□ 0.98
TRAV24A0A0B4J272 OVOL2-201ENST00000278780 1555 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 PEA15-201ENST00000360472 2471 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 HIST2H3C-201ENST00000369158 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 DDAH2-212ENST00000375789 1688 ntAPPRIS P1 TSL 2 BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 DDAH2-213ENST00000375792 1688 ntAPPRIS P1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 HIST2H3A-201ENST00000403683 1656 ntAPPRIS P1 BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 CLK2-203ENST00000368361 2166 ntAPPRIS ALT1 TSL 1 (best) BASIC21.19■□□□□ 0.98
TRAV24A0A0B4J272 MXRA7-202ENST00000375036 1950 ntAPPRIS ALT2 TSL 2 BASIC21.18■□□□□ 0.98
TRAV24A0A0B4J272 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC21.18■□□□□ 0.98
TRAV24A0A0B4J272 FAM107B-205ENST00000378467 2374 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV24A0A0B4J272 APLP1-201ENST00000221891 2495 ntAPPRIS P1 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV24A0A0B4J272 PRSS41-201ENST00000399677 1127 ntAPPRIS P1 TSL 5 BASIC21.17■□□□□ 0.98
TRAV24A0A0B4J272 U2AF1L5-201ENST00000610664 897 ntAPPRIS P5 TSL 1 (best) BASIC21.17■□□□□ 0.98
TRAV24A0A0B4J272 C11orf80-210ENST00000527634 1666 ntAPPRIS ALT2 TSL 5 BASIC21.17■□□□□ 0.98
TRAV24A0A0B4J272 NR6A1-203ENST00000416460 1898 ntAPPRIS ALT2 TSL 1 (best) BASIC21.16■□□□□ 0.98
TRAV24A0A0B4J272 C2orf88-204ENST00000409870 1441 ntAPPRIS P1 TSL 2 BASIC21.16■□□□□ 0.98
TRAV24A0A0B4J272 GSX2-202ENST00000503800 1181 ntTSL 5 BASIC21.16■□□□□ 0.98
TRAV24A0A0B4J272 AC009097.4-201ENST00000566738 777 ntTSL 2 BASIC21.16■□□□□ 0.98
TRAV24A0A0B4J272 POU3F3-201ENST00000361360 3064 ntAPPRIS P1 BASIC21.15■□□□□ 0.98
TRAV24A0A0B4J272 AC021231.2-201ENST00000594613 730 ntBASIC21.15■□□□□ 0.98
TRAV24A0A0B4J272 RAD21-AS1-201ENST00000521487 2010 ntTSL 1 (best) BASIC21.15■□□□□ 0.98
TRAV24A0A0B4J272 SSBP3-202ENST00000357475 1533 ntTSL 1 (best) BASIC21.14■□□□□ 0.98
TRAV24A0A0B4J272 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC21.14■□□□□ 0.97
TRAV24A0A0B4J272 FBXL8-206ENST00000519917 1460 ntAPPRIS P1 TSL 5 BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 C14orf80-205ENST00000392523 1845 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 PPP1R35-201ENST00000292330 1031 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 PLEKHJ1-201ENST00000326631 1206 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 SLC12A2-202ENST00000343225 5509 ntAPPRIS ALT2 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 ZNF276-202ENST00000443381 2267 ntAPPRIS P1 TSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 RUNDC3A-201ENST00000225441 1821 ntTSL 1 (best) BASIC21.13■□□□□ 0.97
TRAV24A0A0B4J272 AKAP8L-208ENST00000595465 1933 ntTSL 2 BASIC21.12■□□□□ 0.97
Retrieved 100 of 98,524 protein–RNA pairs in 10.3 ms