Protein–RNA interactions for Protein: A0A075B6N4

TRBV25-1, T-cell receptor beta variable 25-1 (Fragment), humanhuman

Predictions only

Length 114 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
TRBV25-1A0A075B6N4 TRIOBP-203ENST00000403663 2324 ntAPPRIS ALT2 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 RAB3IL1-202ENST00000394836 2284 ntAPPRIS P1 TSL 1 (best) BASIC18.09■□□□□ 0.49
TRBV25-1A0A075B6N4 CEBPB-201ENST00000303004 1956 ntAPPRIS P1 BASIC18.08■□□□□ 0.48
TRBV25-1A0A075B6N4 TSPOAP1-AS1-205ENST00000580022 2337 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV25-1A0A075B6N4 KLF15-201ENST00000296233 2574 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV25-1A0A075B6N4 AL391121.1-201ENST00000607967 1349 ntBASIC18.07■□□□□ 0.48
TRBV25-1A0A075B6N4 KLF3-AS1-202ENST00000440181 2368 ntTSL 2 BASIC18.07■□□□□ 0.48
TRBV25-1A0A075B6N4 HOXB3-211ENST00000490677 1109 ntTSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV25-1A0A075B6N4 PREB-201ENST00000260643 2166 ntAPPRIS P1 TSL 1 (best) BASIC18.07■□□□□ 0.48
TRBV25-1A0A075B6N4 MARCH11-201ENST00000332432 1741 ntAPPRIS P1 TSL 5 BASIC18.06■□□□□ 0.48
TRBV25-1A0A075B6N4 AC012615.2-201ENST00000586259 447 ntTSL 4 BASIC18.06■□□□□ 0.48
TRBV25-1A0A075B6N4 NPAS3-206ENST00000548645 2926 ntAPPRIS ALT2 TSL 1 (best) BASIC18.06■□□□□ 0.48
TRBV25-1A0A075B6N4 ZFAND2B-208ENST00000409594 2021 ntTSL 2 BASIC18.06■□□□□ 0.48
TRBV25-1A0A075B6N4 PICALM-224ENST00000630913 2261 ntTSL 5 BASIC18.06■□□□□ 0.48
TRBV25-1A0A075B6N4 CRIM1-201ENST00000280527 5912 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 ATP5G2-208ENST00000552242 1950 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 CIB1-201ENST00000328649 1247 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 FGF3-201ENST00000334134 892 ntAPPRIS P1 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 CIB1-202ENST00000612800 1096 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 ACSS1-203ENST00000432802 2438 ntTSL 2 BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 RNF19B-201ENST00000235150 2334 ntAPPRIS ALT2 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 PDIA6-201ENST00000272227 2338 ntAPPRIS P3 TSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 FOXP4-203ENST00000373060 5948 ntTSL 5 BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 FOXP4-204ENST00000373063 5910 ntTSL 1 (best) BASIC18.05■□□□□ 0.48
TRBV25-1A0A075B6N4 DACT1-206ENST00000556859 2239 ntAPPRIS ALT2 TSL 2 BASIC18.04■□□□□ 0.48
TRBV25-1A0A075B6N4 SHF-208ENST00000560734 1731 ntTSL 3 BASIC18.04■□□□□ 0.48
TRBV25-1A0A075B6N4 DHRS13-201ENST00000378895 1921 ntAPPRIS P1 TSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV25-1A0A075B6N4 FTCDNL1-201ENST00000416668 944 ntTSL 1 (best) BASIC18.04■□□□□ 0.48
TRBV25-1A0A075B6N4 MAP3K5-201ENST00000359015 5197 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV25-1A0A075B6N4 BCAP31-207ENST00000458587 1810 ntTSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV25-1A0A075B6N4 BATF3-201ENST00000243440 980 ntAPPRIS P1 TSL 1 (best) BASIC18.03■□□□□ 0.48
TRBV25-1A0A075B6N4 NHLRC4-201ENST00000424439 2097 ntAPPRIS P1 TSL 3 BASIC18.03■□□□□ 0.48
TRBV25-1A0A075B6N4 ZDHHC23-206ENST00000498275 2055 ntAPPRIS ALT2 TSL 2 BASIC18.02■□□□□ 0.48
TRBV25-1A0A075B6N4 AC097358.2-201ENST00000607541 1159 ntBASIC18.02■□□□□ 0.48
TRBV25-1A0A075B6N4 RILPL1-205ENST00000636882 2258 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV25-1A0A075B6N4 KANSL2-215ENST00000553086 1830 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV25-1A0A075B6N4 GRK6-206ENST00000507633 1660 ntTSL 5 BASIC18.02■□□□□ 0.47
TRBV25-1A0A075B6N4 RUNX2-210ENST00000576263 2256 ntTSL 5 BASIC18.01■□□□□ 0.47
TRBV25-1A0A075B6N4 FOXF2-201ENST00000259806 2187 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV25-1A0A075B6N4 CLPTM1L-201ENST00000320895 2500 ntAPPRIS P1 TSL 1 (best) BASIC18.01■□□□□ 0.47
TRBV25-1A0A075B6N4 SDCCAG3-201ENST00000298537 2314 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV25-1A0A075B6N4 KANSL1L-207ENST00000452086 2334 ntTSL 1 (best) BASIC18■□□□□ 0.47
TRBV25-1A0A075B6N4 PPP2R2D-201ENST00000455566 5738 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV25-1A0A075B6N4 SEC61G-204ENST00000450622 512 ntAPPRIS P1 TSL 2 BASIC18■□□□□ 0.47
TRBV25-1A0A075B6N4 DUSP15-202ENST00000339738 1454 ntAPPRIS P1 TSL 1 (best) BASIC18■□□□□ 0.47
TRBV25-1A0A075B6N4 ZDHHC14-204ENST00000414563 3134 ntTSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV25-1A0A075B6N4 LY6K-203ENST00000519387 963 ntAPPRIS ALT2 TSL 2 BASIC17.99■□□□□ 0.47
TRBV25-1A0A075B6N4 TMEM200C-201ENST00000383490 1920 ntAPPRIS P1 BASIC17.99■□□□□ 0.47
TRBV25-1A0A075B6N4 EZH2-208ENST00000483967 2466 ntAPPRIS ALT1 TSL 2 BASIC17.99■□□□□ 0.47
TRBV25-1A0A075B6N4 DACT2-202ENST00000366796 2028 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV25-1A0A075B6N4 PCSK6-218ENST00000619160 3093 ntAPPRIS ALT2 TSL 1 (best) BASIC17.99■□□□□ 0.47
TRBV25-1A0A075B6N4 AC093323.1-202ENST00000635031 2045 ntBASIC17.98■□□□□ 0.47
TRBV25-1A0A075B6N4 SCX-201ENST00000567180 999 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV25-1A0A075B6N4 AP004833.2-201ENST00000532228 1454 ntBASIC17.98■□□□□ 0.47
TRBV25-1A0A075B6N4 ENKD1-201ENST00000243878 1579 ntAPPRIS P1 TSL 1 (best) BASIC17.98■□□□□ 0.47
TRBV25-1A0A075B6N4 ATP5G2-201ENST00000338662 1792 ntTSL 2 BASIC17.98■□□□□ 0.47
TRBV25-1A0A075B6N4 CPTP-201ENST00000343938 2190 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 F8A3-201ENST00000622749 1759 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 NADK2-210ENST00000514504 1233 ntTSL 5 BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 AC136428.2-201ENST00000563187 214 ntBASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 ARL2-SNX15-201ENST00000301886 2392 ntAPPRIS P1 TSL 2 BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 TNFRSF25-204ENST00000356876 1625 ntAPPRIS ALT2 TSL 1 (best) BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 TANGO2-214ENST00000447208 2086 ntTSL 3 BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 NKPD1-202ENST00000589776 1950 ntAPPRIS P1 BASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 BX255925.1-201ENST00000566954 1854 ntBASIC17.97■□□□□ 0.47
TRBV25-1A0A075B6N4 NOXA1-201ENST00000341349 1678 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV25-1A0A075B6N4 FTCD-201ENST00000291670 1905 ntAPPRIS P1 TSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV25-1A0A075B6N4 KCNC3-201ENST00000376959 5447 ntAPPRIS ALT2 TSL 5 BASIC17.96■□□□□ 0.47
TRBV25-1A0A075B6N4 CAHM-201ENST00000604200 896 ntBASIC17.96■□□□□ 0.47
TRBV25-1A0A075B6N4 TTBK2-207ENST00000567840 1961 ntTSL 1 (best) BASIC17.96■□□□□ 0.47
TRBV25-1A0A075B6N4 DNAH9-209ENST00000579828 1986 ntTSL 2 BASIC17.96■□□□□ 0.47
TRBV25-1A0A075B6N4 POU2F2-208ENST00000529952 1716 ntAPPRIS ALT2 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV25-1A0A075B6N4 LRRC75B-201ENST00000318753 1238 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV25-1A0A075B6N4 DVL1-201ENST00000378888 3239 ntAPPRIS ALT1 TSL 5 BASIC17.95■□□□□ 0.46
TRBV25-1A0A075B6N4 ST7-201ENST00000265437 2899 ntTSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV25-1A0A075B6N4 DCAF15-201ENST00000254337 2278 ntAPPRIS P1 TSL 1 (best) BASIC17.95■□□□□ 0.46
TRBV25-1A0A075B6N4 SYT7-203ENST00000539008 2061 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 SLC35A1-203ENST00000369557 1653 ntTSL 2 BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 CTSA-203ENST00000372459 1972 ntTSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 CHST14-202ENST00000559991 1968 ntTSL 5 BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 TPGS1-201ENST00000359315 1114 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 FOXA2-201ENST00000377115 2401 ntAPPRIS P3 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 TOMM40-201ENST00000252487 1707 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 TOMM40-202ENST00000405636 1709 ntAPPRIS P2 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 P2RY2-202ENST00000393596 2174 ntAPPRIS P1 TSL 1 (best) BASIC17.94■□□□□ 0.46
TRBV25-1A0A075B6N4 C11orf95-202ENST00000433688 5716 ntAPPRIS P1 TSL 5 BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 C8orf58-206ENST00000614574 1955 ntAPPRIS ALT2 TSL 5 BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 PABPN1-202ENST00000397276 2768 ntAPPRIS ALT1 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 PPP1CC-208ENST00000551676 1581 ntTSL 2 BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 PTPRM-201ENST00000332175 6095 ntAPPRIS P3 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 C17orf97-201ENST00000360127 1839 ntAPPRIS P2 TSL 1 (best) BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 GNB1-210ENST00000615252 3048 ntTSL 5 BASIC17.93■□□□□ 0.46
TRBV25-1A0A075B6N4 MORF4L1-203ENST00000426013 1880 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 AARD-201ENST00000378279 2299 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 PINK1-201ENST00000321556 2660 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 AC020928.2-201ENST00000588717 2197 ntBASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 NMB-202ENST00000394588 1017 ntTSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 ZFAND2B-204ENST00000409217 886 ntTSL 2 BASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 ZNF653-201ENST00000293771 2240 ntAPPRIS P1 TSL 1 (best) BASIC17.92■□□□□ 0.46
TRBV25-1A0A075B6N4 MAGI2-217ENST00000629359 6704 ntTSL 5 BASIC17.92■□□□□ 0.46
Retrieved 100 of 98,524 protein–RNA pairs in 26.1 ms