Protein–RNA interactions for Protein: Q96DX8

RTP4, Receptor-transporting protein 4, humanhuman

Predictions only

Length 246 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
RTP4Q96DX8 WIPF1-202ENST00000359761 2003 ntAPPRIS P2 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 COPS7A-204ENST00000534947 2034 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 CBSL-210ENST00000624934 1992 ntTSL 5 BASIC19.63■□□□□ 0.73
RTP4Q96DX8 SRSF2-202ENST00000359995 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.63■□□□□ 0.73
RTP4Q96DX8 THOC3-208ENST00000513482 1796 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 KTI12-201ENST00000371614 1714 ntAPPRIS P1 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 ONECUT3-201ENST00000382349 8318 ntAPPRIS P1 TSL 5 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 TINCR-201ENST00000448587 3733 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 LARGE2-202ENST00000401752 2516 ntAPPRIS P3 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 BAALC-201ENST00000297574 801 ntTSL 3 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 PTPMT1-202ENST00000326674 768 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 RGCC-201ENST00000379359 960 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 AC226101.2-201ENST00000458252 747 ntTSL 2 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 FAM213B-215ENST00000537325 1096 ntAPPRIS ALT2 TSL 2 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 AC073912.1-201ENST00000546264 587 ntTSL 3 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 C20orf204-205ENST00000636176 961 ntAPPRIS P5 TSL 5 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 ANKS6-201ENST00000353234 7164 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 CBX1-202ENST00000393408 2422 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 RBFOX1-204ENST00000422070 1684 ntTSL 2 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 ATP6V0B-213ENST00000532642 1685 ntTSL 2 BASIC19.62■□□□□ 0.73
RTP4Q96DX8 EIF3B-202ENST00000397011 2966 ntAPPRIS P1 TSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 SLC29A2-201ENST00000311161 2262 ntTSL 1 (best) BASIC19.62■□□□□ 0.73
RTP4Q96DX8 GCSH-201ENST00000315467 1597 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 CCDC106-201ENST00000308964 1546 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 TSPAN4-204ENST00000397404 1462 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 IL6R-208ENST00000622330 1496 ntAPPRIS ALT2 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 BCAP29-202ENST00000379117 1946 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 TPCN2-201ENST00000294309 2931 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 ATXN7L2-202ENST00000369870 2318 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 ABHD14A-201ENST00000273596 1062 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 TSTD1-201ENST00000318289 626 ntAPPRIS P3 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 MTHFD1L-201ENST00000367307 1049 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 C1orf50-201ENST00000372525 996 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 TMEM35B-201ENST00000373337 922 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 SLC35A2-202ENST00000376512 903 ntTSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 MDK-205ENST00000405308 1166 ntAPPRIS P2 TSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 HOTAIRM1-203ENST00000429611 722 ntTSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 TSPY21P-201ENST00000433481 731 ntBASIC19.61■□□□□ 0.73
RTP4Q96DX8 RPS23-206ENST00000510210 1058 ntTSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 CAVIN3-203ENST00000530979 957 ntTSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 LRRC75A-AS1-225ENST00000581913 1091 ntTSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 CYB561-214ENST00000582034 1193 ntTSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 AC013268.1-201ENST00000639717 1208 ntTSL 5 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 WBP2-213ENST00000590221 1745 ntAPPRIS ALT1 TSL 3 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 NKX1-2-201ENST00000451024 3364 ntAPPRIS P1 TSL 5 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 SEPT2-203ENST00000391971 3315 ntAPPRIS P1 TSL 1 (best) BASIC19.61■□□□□ 0.73
RTP4Q96DX8 RNF146-203ENST00000368314 2369 ntAPPRIS ALT1 TSL 2 BASIC19.61■□□□□ 0.73
RTP4Q96DX8 ENOPH1-203ENST00000509635 1874 ntTSL 3 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 NTN1-201ENST00000173229 5954 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 MEGF6-202ENST00000356575 5455 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 MPZL1-201ENST00000359523 5010 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 NCK2-205ENST00000451463 1795 ntTSL 2 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 MIB2-203ENST00000378712 2890 ntTSL 2 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 FNIP1-204ENST00000511848 1720 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 SPATA20-226ENST00000619622 2769 ntAPPRIS P2 TSL 5 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 IZUMO2-201ENST00000293405 728 ntAPPRIS P2 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 C15orf48-201ENST00000344300 875 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 NMRK1-201ENST00000361092 1185 ntAPPRIS P1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 ZDHHC12-202ENST00000372667 1187 ntTSL 5 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 FAM131A-208ENST00000453072 1038 ntTSL 2 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 NDUFB2-203ENST00000461457 559 ntTSL 3 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 AL160286.2-201ENST00000567150 934 ntBASIC19.6■□□□□ 0.73
RTP4Q96DX8 AC233263.1-201ENST00000578059 224 ntBASIC19.6■□□□□ 0.73
RTP4Q96DX8 AC004264.1-201ENST00000608354 794 ntBASIC19.6■□□□□ 0.73
RTP4Q96DX8 RBPMS-210ENST00000520191 1613 ntTSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 KLHL2-201ENST00000226725 3134 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 LINC02361-201ENST00000538731 1484 ntTSL 2 BASIC19.6■□□□□ 0.73
RTP4Q96DX8 MEN1-201ENST00000312049 2761 ntAPPRIS ALT1 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 NTRK1-206ENST00000524377 2432 ntAPPRIS P3 TSL 1 (best) BASIC19.6■□□□□ 0.73
RTP4Q96DX8 CYP2F1-201ENST00000331105 1720 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 BAZ1B-202ENST00000404251 5428 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 TMEM230-206ENST00000379283 1660 ntAPPRIS P1 TSL 3 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 SLC3A2-202ENST00000377889 1993 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 SEMA3B-210ENST00000611067 2292 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 LSM4-203ENST00000593829 1908 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 AP001351.1-201ENST00000501397 1865 ntTSL 2 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 SSNA1-201ENST00000322310 896 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 PUSL1-201ENST00000379031 1287 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 COQ10B-203ENST00000409398 879 ntTSL 3 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 KRT17P3-201ENST00000420566 1262 ntBASIC19.59■□□□□ 0.73
RTP4Q96DX8 ZNF436-AS1-202ENST00000437367 606 ntTSL 2 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 CARD9-202ENST00000371734 1814 ntTSL 5 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 COBL-202ENST00000395540 2332 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 SEMA7A-203ENST00000543145 2304 ntTSL 2 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 PRELID3A-201ENST00000336990 1715 ntAPPRIS P1 TSL 2 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 PRELID3A-202ENST00000440960 1716 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 PSAP-205ENST00000610929 1969 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 ANKRD24-201ENST00000262970 3711 ntAPPRIS ALT2 TSL 5 BASIC19.59■□□□□ 0.73
RTP4Q96DX8 GJB6-204ENST00000400066 1927 ntAPPRIS P1 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 FBXL18-203ENST00000453700 1932 ntAPPRIS ALT2 TSL 1 (best) BASIC19.59■□□□□ 0.73
RTP4Q96DX8 TCAIM-203ENST00000396078 2178 ntTSL 1 (best) BASIC19.59■□□□□ 0.73
Retrieved 100 of 98,524 protein–RNA pairs in 21.6 ms