RNA–Protein interactions for RNA: ENST00000524377.5

NTRK1-206, Transcript of neurotrophic receptor tyrosine kinase 1, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene NTRK1, Length 2,432 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NTRK1-206ENST00000524377 NISCHQ9Y2I1 1504 aa39.81■■■■□ 3.96
NTRK1-206ENST00000524377 CCDC180Q9P1Z9 1646 aa34.52■■■■□ 3.12
NTRK1-206ENST00000524377 ZCCHC6Q5VYS8 1495 aaKnown RBP33.43■■■□□ 2.94
NTRK1-206ENST00000524377 DCAF8L2P0C7V8 631 aa33.07■■■□□ 2.88
NTRK1-206ENST00000524377 ABCC9O60706 1549 aa32.88■■■□□ 2.85
NTRK1-206ENST00000524377 DCAF1Q9Y4B6 1507 aa32.79■■■□□ 2.84
NTRK1-206ENST00000524377 SHROOM4Q9ULL8 1493 aa32.72■■■□□ 2.83
NTRK1-206ENST00000524377 HRCP23327 699 aa32.58■■■□□ 2.81
NTRK1-206ENST00000524377 MYO15BQ96JP2 1530 aa32.36■■■□□ 2.77
NTRK1-206ENST00000524377 NACADO15069 1562 aa32.2■■■□□ 2.75
NTRK1-206ENST00000524377 SCRIBQ14160 1630 aa31.95■■■□□ 2.71
NTRK1-206ENST00000524377 RB1CC1Q8TDY2 1594 aa31.92■■■□□ 2.7
NTRK1-206ENST00000524377 SUPT5HO00267 1087 aaKnown RBP31.88■■■□□ 2.69
NTRK1-206ENST00000524377 PPARGC1BQ86YN6 1023 aaKnown RBP31.88■■■□□ 2.69
NTRK1-206ENST00000524377 PCGF6Q9BYE7 350 aa31.8■■■□□ 2.68
NTRK1-206ENST00000524377 CHIC1Q5VXU3 224 aa31.52■■■□□ 2.64
NTRK1-206ENST00000524377 PELP1Q8IZL8 1130 aaKnown RBP31.44■■■□□ 2.62
NTRK1-206ENST00000524377 UNC13AQ9UPW8 1703 aa31.36■■■□□ 2.61
NTRK1-206ENST00000524377 PABPN1Q86U42 306 aaKnown RBP eCLIP31.13■■■□□ 2.57
NTRK1-206ENST00000524377 BICRAQ9NZM4 1560 aa31.1■■■□□ 2.57
NTRK1-206ENST00000524377 CECR2Q9BXF3 1484 aa31.07■■■□□ 2.56
NTRK1-206ENST00000524377 RSF1Q96T23 1441 aaPredicted RBP30.97■■■□□ 2.55
NTRK1-206ENST00000524377 SCAF1Q9H7N4 1312 aaKnown RBP30.87■■■□□ 2.53
NTRK1-206ENST00000524377 MROH2BQ7Z745 1585 aa30.84■■■□□ 2.53
NTRK1-206ENST00000524377 TRIM26Q12899 539 aaPredicted RBP30.79■■■□□ 2.52
NTRK1-206ENST00000524377 LOC105371045A0A1W2PR82 267 aa30.75■■■□□ 2.51
NTRK1-206ENST00000524377 BAZ1AQ9NRL2 1556 aaPredicted RBP30.67■■■□□ 2.5
NTRK1-206ENST00000524377 WIZO95785 1651 aa30.57■■■□□ 2.48
NTRK1-206ENST00000524377 SMARCA4P51532 1647 aa30.56■■■□□ 2.48
NTRK1-206ENST00000524377 ZEB1P37275 1124 aaPredicted RBP30.54■■■□□ 2.48
NTRK1-206ENST00000524377 MYT1Q01538 1121 aa30.2■■■□□ 2.43
NTRK1-206ENST00000524377 TOP2AP11388 1531 aaKnown RBP30.15■■■□□ 2.42
NTRK1-206ENST00000524377 PEG3Q9GZU2 1588 aa30.14■■■□□ 2.42
NTRK1-206ENST00000524377 ATAD2BQ9ULI0 1458 aa30.11■■■□□ 2.41
NTRK1-206ENST00000524377 EIF4G1Q04637 1599 aaKnown RBP30.1■■■□□ 2.41
NTRK1-206ENST00000524377 ACIN1Q9UKV3 1341 aaKnown RBP30.06■■■□□ 2.4
NTRK1-206ENST00000524377 NEUROD1Q13562 356 aa29.98■■■□□ 2.39
NTRK1-206ENST00000524377 SMARCA2P51531 1590 aa29.98■■■□□ 2.39
NTRK1-206ENST00000524377 CCDC88BA6NC98 1476 aa29.96■■■□□ 2.39
NTRK1-206ENST00000524377 BAZ1BQ9UIG0 1483 aaKnown RBP29.9■■■□□ 2.38
NTRK1-206ENST00000524377 NCAPD3P42695 1498 aa29.8■■■□□ 2.36
NTRK1-206ENST00000524377 GTF3C3Q9Y5Q9 886 aa29.78■■■□□ 2.36
NTRK1-206ENST00000524377 HMGXB3Q12766 1538 aa29.68■■■□□ 2.34
NTRK1-206ENST00000524377 CC2D2AQ9P2K1 1620 aa29.67■■■□□ 2.34
NTRK1-206ENST00000524377 CENPBP07199 599 aaPredicted RBP29.57■■■□□ 2.32
NTRK1-206ENST00000524377 TRIM41Q8WV44 630 aa29.51■■■□□ 2.31
NTRK1-206ENST00000524377 DIEXFQ68CQ4 756 aaKnown RBP29.46■■■□□ 2.31
NTRK1-206ENST00000524377 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP29.46■■■□□ 2.31
NTRK1-206ENST00000524377 FAM9AQ8IZU1 332 aaPredicted RBP29.46■■■□□ 2.31
NTRK1-206ENST00000524377 ABCC8Q09428 1581 aa29.37■■■□□ 2.29
NTRK1-206ENST00000524377 CCER1Q8TC90 406 aaPredicted RBP29.36■■■□□ 2.29
NTRK1-206ENST00000524377 EHMT2Q96KQ7 1210 aa29.29■■■□□ 2.28
NTRK1-206ENST00000524377 DNAJC5BQ9UF47 199 aa29.24■■■□□ 2.27
NTRK1-206ENST00000524377 CFTRP13569 1480 aa29.17■■■□□ 2.26
NTRK1-206ENST00000524377 WRNQ14191 1432 aaPredicted RBP eCLIP29.1■■■□□ 2.25
NTRK1-206ENST00000524377 CADPSQ9ULU8 1353 aa29.08■■■□□ 2.25
NTRK1-206ENST00000524377 SYNJ1O43426 1573 aa29.01■■■□□ 2.23
NTRK1-206ENST00000524377 YTHDC1Q96MU7 727 aaKnown RBP28.94■■■□□ 2.22
NTRK1-206ENST00000524377 NESP48681 1621 aa28.92■■■□□ 2.22
NTRK1-206ENST00000524377 ZNF316A6NFI3 1004 aaPredicted RBP28.91■■■□□ 2.22
NTRK1-206ENST00000524377 SOGA1O94964 1423 aa28.87■■■□□ 2.21
NTRK1-206ENST00000524377 PRDM2Q13029 1718 aa28.85■■■□□ 2.21
NTRK1-206ENST00000524377 TOP2BQ02880 1626 aa28.81■■■□□ 2.2
NTRK1-206ENST00000524377 CUX1P39880 1505 aa28.81■■■□□ 2.2
NTRK1-206ENST00000524377 RUSC2Q8N2Y8 1516 aa28.8■■■□□ 2.2
NTRK1-206ENST00000524377 FANCD2Q9BXW9 1451 aa28.76■■■□□ 2.19
NTRK1-206ENST00000524377 MIER1Q8N108 512 aa28.74■■■□□ 2.19
NTRK1-206ENST00000524377 BIVM-ERCC5R4GMW8 1640 aa28.74■■■□□ 2.19
NTRK1-206ENST00000524377 LAMC3Q9Y6N6 1575 aa28.7■■■□□ 2.19
NTRK1-206ENST00000524377 TTBK1Q5TCY1 1321 aaPredicted RBP28.65■■■□□ 2.18
NTRK1-206ENST00000524377 CSRNP3Q8WYN3 585 aa28.61■■■□□ 2.17
NTRK1-206ENST00000524377 EEA1Q15075 1411 aa28.58■■■□□ 2.17
NTRK1-206ENST00000524377 PDS5BQ9NTI5 1447 aa28.53■■■□□ 2.16
NTRK1-206ENST00000524377 CEP164Q9UPV0 1460 aa28.51■■■□□ 2.16
NTRK1-206ENST00000524377 FGD5Q6ZNL6 1462 aa28.46■■■□□ 2.15
NTRK1-206ENST00000524377 TOPBP1Q92547 1522 aa28.45■■■□□ 2.14
NTRK1-206ENST00000524377 KIF21AQ7Z4S6 1674 aa28.44■■■□□ 2.14
NTRK1-206ENST00000524377 URB2Q14146 1524 aaKnown RBP28.43■■■□□ 2.14
NTRK1-206ENST00000524377 DNMBPQ6XZF7 1577 aa28.43■■■□□ 2.14
NTRK1-206ENST00000524377 CEP162Q5TB80 1403 aa28.43■■■□□ 2.14
NTRK1-206ENST00000524377 SUPT16HQ9Y5B9 1047 aaKnown RBP28.38■■■□□ 2.13
NTRK1-206ENST00000524377 ANP32EQ9BTT0 268 aa28.35■■■□□ 2.13
NTRK1-206ENST00000524377 BCL11AQ9H165 835 aa28.33■■■□□ 2.13
NTRK1-206ENST00000524377 POLA1P09884 1462 aaPredicted RBP28.33■■■□□ 2.13
NTRK1-206ENST00000524377 KIF27Q86VH2 1401 aa28.32■■■□□ 2.12
NTRK1-206ENST00000524377 RAD54L2Q9Y4B4 1467 aa28.32■■■□□ 2.12
NTRK1-206ENST00000524377 CUX2O14529 1486 aa28.3■■■□□ 2.12
NTRK1-206ENST00000524377 CLSPNQ9HAW4 1339 aa28.3■■■□□ 2.12
NTRK1-206ENST00000524377 TSHZ2Q9NRE2 1034 aa28.29■■■□□ 2.12
NTRK1-206ENST00000524377 GOLGA3Q08378 1498 aa28.26■■■□□ 2.12
NTRK1-206ENST00000524377 UBTFP17480 764 aaKnown RBP28.26■■■□□ 2.11
NTRK1-206ENST00000524377 KIF21BO75037 1637 aa28.24■■■□□ 2.11
NTRK1-206ENST00000524377 TNIKQ9UKE5 1360 aa28.23■■■□□ 2.11
NTRK1-206ENST00000524377 RAPGEF2Q9Y4G8 1499 aa28.23■■■□□ 2.11
NTRK1-206ENST00000524377 PRXQ9BXM0 1461 aa28.19■■■□□ 2.1
NTRK1-206ENST00000524377 IGF1RP08069 1367 aa28.18■■■□□ 2.1
NTRK1-206ENST00000524377 MRC2Q9UBG0 1479 aa28.17■■■□□ 2.1
NTRK1-206ENST00000524377 ABCA10Q8WWZ4 1543 aa28.17■■■□□ 2.1
NTRK1-206ENST00000524377 HNRNPUL2Q1KMD3 747 aaKnown RBP28.11■■■□□ 2.09
NTRK1-206ENST00000524377 ERCC6Q03468 1493 aa28.09■■■□□ 2.09
Retrieved 100 of 20,778 RNA–protein pairs in 14.5 ms