RNA–Protein interactions for RNA: ENST00000367307.8

MTHFD1L-201, Transcript of methylenetetrahydrofolate dehydrogenase (NADP+ dependent) 1 like, humanhuman

TSL 1 (best) BASIC

Gene MTHFD1L, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MTHFD1L-201ENST00000367307 NISCHQ9Y2I1 1504 aa49.75■■■■■ 5.55
MTHFD1L-201ENST00000367307 ABCC9O60706 1549 aa44.64■■■■■ 4.74
MTHFD1L-201ENST00000367307 CCDC180Q9P1Z9 1646 aa44.53■■■■■ 4.72
MTHFD1L-201ENST00000367307 RB1CC1Q8TDY2 1594 aa42.42■■■■■ 4.38
MTHFD1L-201ENST00000367307 NACADO15069 1562 aa42.14■■■■■ 4.34
MTHFD1L-201ENST00000367307 DCAF8L2P0C7V8 631 aa42■■■■■ 4.31
MTHFD1L-201ENST00000367307 DNAJC5BQ9UF47 199 aa41.94■■■■■ 4.3
MTHFD1L-201ENST00000367307 PABPN1Q86U42 306 aaKnown RBP eCLIP41.61■■■■■ 4.25
MTHFD1L-201ENST00000367307 MYO15BQ96JP2 1530 aa41.59■■■■■ 4.25
MTHFD1L-201ENST00000367307 UNC13AQ9UPW8 1703 aa41.38■■■■■ 4.22
MTHFD1L-201ENST00000367307 ZCCHC6Q5VYS8 1495 aaKnown RBP41.25■■■■■ 4.19
MTHFD1L-201ENST00000367307 BICRAQ9NZM4 1560 aa41.24■■■■■ 4.19
MTHFD1L-201ENST00000367307 DCAF1Q9Y4B6 1507 aa41.07■■■■■ 4.16
MTHFD1L-201ENST00000367307 SHROOM4Q9ULL8 1493 aa40.64■■■■■ 4.1
MTHFD1L-201ENST00000367307 SCRIBQ14160 1630 aa40.64■■■■■ 4.1
MTHFD1L-201ENST00000367307 CC2D2AQ9P2K1 1620 aa40.27■■■■■ 4.04
MTHFD1L-201ENST00000367307 EIF4G1Q04637 1599 aaKnown RBP40.22■■■■■ 4.03
MTHFD1L-201ENST00000367307 CECR2Q9BXF3 1484 aa40.2■■■■■ 4.03
MTHFD1L-201ENST00000367307 NCAPD3P42695 1498 aa38.97■■■■□ 3.83
MTHFD1L-201ENST00000367307 ATAD2BQ9ULI0 1458 aa38.86■■■■□ 3.81
MTHFD1L-201ENST00000367307 SMARCA4P51532 1647 aa38.76■■■■□ 3.8
MTHFD1L-201ENST00000367307 SMARCA2P51531 1590 aa38.69■■■■□ 3.78
MTHFD1L-201ENST00000367307 HMGXB3Q12766 1538 aa38.63■■■■□ 3.78
MTHFD1L-201ENST00000367307 BAZ1AQ9NRL2 1556 aaPredicted RBP38.58■■■■□ 3.77
MTHFD1L-201ENST00000367307 ERCC6Q03468 1493 aa38.5■■■■□ 3.75
MTHFD1L-201ENST00000367307 BAZ1BQ9UIG0 1483 aaKnown RBP38.45■■■■□ 3.75
MTHFD1L-201ENST00000367307 DNAJC5Q9H3Z4 198 aa38.44■■■■□ 3.74
MTHFD1L-201ENST00000367307 CUX2O14529 1486 aa38.42■■■■□ 3.74
MTHFD1L-201ENST00000367307 PEG3Q9GZU2 1588 aa38.4■■■■□ 3.74
MTHFD1L-201ENST00000367307 NESP48681 1621 aa38.36■■■■□ 3.73
MTHFD1L-201ENST00000367307 MROH2BQ7Z745 1585 aa38.36■■■■□ 3.73
MTHFD1L-201ENST00000367307 LAMC3Q9Y6N6 1575 aa38.02■■■■□ 3.68
MTHFD1L-201ENST00000367307 THOC2Q8NI27 1593 aaKnown RBP37.91■■■■□ 3.66
MTHFD1L-201ENST00000367307 WIZO95785 1651 aa37.84■■■■□ 3.65
MTHFD1L-201ENST00000367307 PDS5BQ9NTI5 1447 aa37.84■■■■□ 3.65
MTHFD1L-201ENST00000367307 CADPSQ9ULU8 1353 aa37.8■■■■□ 3.64
MTHFD1L-201ENST00000367307 KIF21AQ7Z4S6 1674 aa37.76■■■■□ 3.63
MTHFD1L-201ENST00000367307 RSF1Q96T23 1441 aaPredicted RBP37.59■■■■□ 3.61
MTHFD1L-201ENST00000367307 MRC2Q9UBG0 1479 aa37.52■■■■□ 3.6
MTHFD1L-201ENST00000367307 WDR62O43379 1518 aa37.42■■■■□ 3.58
MTHFD1L-201ENST00000367307 TOP2AP11388 1531 aaKnown RBP37.38■■■■□ 3.57
MTHFD1L-201ENST00000367307 CEP164Q9UPV0 1460 aa37.37■■■■□ 3.57
MTHFD1L-201ENST00000367307 CFTRP13569 1480 aa37.36■■■■□ 3.57
MTHFD1L-201ENST00000367307 FANCD2Q9BXW9 1451 aa37.35■■■■□ 3.57
MTHFD1L-201ENST00000367307 URB2Q14146 1524 aaKnown RBP37.05■■■■□ 3.52
MTHFD1L-201ENST00000367307 CCDC88BA6NC98 1476 aa37■■■■□ 3.51
MTHFD1L-201ENST00000367307 PRDM2Q13029 1718 aa36.79■■■■□ 3.48
MTHFD1L-201ENST00000367307 TRIM41Q8WV44 630 aa36.76■■■■□ 3.48
MTHFD1L-201ENST00000367307 OSCARQ8IYS5 282 aa36.7■■■■□ 3.47
MTHFD1L-201ENST00000367307 TOPBP1Q92547 1522 aa36.64■■■■□ 3.46
MTHFD1L-201ENST00000367307 IFT140Q96RY7 1462 aa36.62■■■■□ 3.45
MTHFD1L-201ENST00000367307 ZNF608Q9ULD9 1512 aaPredicted RBP36.61■■■■□ 3.45
MTHFD1L-201ENST00000367307 ABCC8Q09428 1581 aa36.51■■■■□ 3.44
MTHFD1L-201ENST00000367307 DNMBPQ6XZF7 1577 aa36.47■■■■□ 3.43
MTHFD1L-201ENST00000367307 EIF4G3O43432 1585 aaKnown RBP36.34■■■■□ 3.41
MTHFD1L-201ENST00000367307 TARBP1Q13395 1621 aaKnown RBP36.29■■■■□ 3.4
MTHFD1L-201ENST00000367307 AQRO60306 1485 aaKnown RBP eCLIP36.28■■■■□ 3.44e-10■■■■□ 24.6
MTHFD1L-201ENST00000367307 POLA1P09884 1462 aaPredicted RBP36.28■■■■□ 3.4
MTHFD1L-201ENST00000367307 RIMBP3CA6NJZ7 1639 aa36.18■■■■□ 3.38
MTHFD1L-201ENST00000367307 RIMBP3BA6NNM3 1639 aa36.18■■■■□ 3.38
MTHFD1L-201ENST00000367307 RIMBP3Q9UFD9 1639 aa36.18■■■■□ 3.38
MTHFD1L-201ENST00000367307 RAD54L2Q9Y4B4 1467 aa36.17■■■■□ 3.38
MTHFD1L-201ENST00000367307 SOGA1O94964 1423 aa36.11■■■■□ 3.37
MTHFD1L-201ENST00000367307 ARHGEF11O15085 1522 aa36.11■■■■□ 3.37
MTHFD1L-201ENST00000367307 TDRD9Q8NDG6 1382 aaKnown RBP36.07■■■■□ 3.36
MTHFD1L-201ENST00000367307 FGD5Q6ZNL6 1462 aa36.05■■■■□ 3.36
MTHFD1L-201ENST00000367307 CUX1P39880 1505 aa36.03■■■■□ 3.36
MTHFD1L-201ENST00000367307 FBLN2P98095 1184 aa36.02■■■■□ 3.36
MTHFD1L-201ENST00000367307 CHD1O14646 1710 aa36■■■■□ 3.35
MTHFD1L-201ENST00000367307 SUPT5HO00267 1087 aaKnown RBP35.94■■■■□ 3.34
MTHFD1L-201ENST00000367307 SNAPC4Q5SXM2 1469 aa35.89■■■■□ 3.34
MTHFD1L-201ENST00000367307 CYB5RLQ6IPT4 315 aa35.87■■■■□ 3.33
MTHFD1L-201ENST00000367307 WDR97A6NE52 1622 aa35.86■■■■□ 3.33
MTHFD1L-201ENST00000367307 GRIN2BQ13224 1484 aa35.78■■■■□ 3.32
MTHFD1L-201ENST00000367307 ARAP1Q96P48 1450 aa35.78■■■■□ 3.32
MTHFD1L-201ENST00000367307 MAGI1Q96QZ7 1491 aaPredicted RBP35.77■■■■□ 3.32
MTHFD1L-201ENST00000367307 CHMP7Q8WUX9 453 aaPredicted RBP35.75■■■■□ 3.31
MTHFD1L-201ENST00000367307 CLASP1Q7Z460 1538 aa35.68■■■■□ 3.3
MTHFD1L-201ENST00000367307 SYNJ2O15056 1496 aa35.67■■■■□ 3.3
MTHFD1L-201ENST00000367307 GAPVD1Q14C86 1478 aa35.66■■■■□ 3.3
MTHFD1L-201ENST00000367307 ABCA10Q8WWZ4 1543 aa35.63■■■■□ 3.29
MTHFD1L-201ENST00000367307 SYNJ1O43426 1573 aa35.62■■■■□ 3.29
MTHFD1L-201ENST00000367307 ABCA5Q8WWZ7 1642 aa35.54■■■■□ 3.28
MTHFD1L-201ENST00000367307 PBRM1Q86U86 1689 aa35.54■■■■□ 3.28
MTHFD1L-201ENST00000367307 WRNQ14191 1432 aaPredicted RBP eCLIP35.49■■■■□ 3.27
MTHFD1L-201ENST00000367307 TRHP20396 242 aaPredicted RBP35.43■■■■□ 3.26
MTHFD1L-201ENST00000367307 TOP2BQ02880 1626 aa35.4■■■■□ 3.26
MTHFD1L-201ENST00000367307 BIVM-ERCC5R4GMW8 1640 aa35.38■■■■□ 3.25
MTHFD1L-201ENST00000367307 GRIN2AQ12879 1464 aa35.33■■■■□ 3.25
MTHFD1L-201ENST00000367307 ADAMTS12P58397 1594 aa35.29■■■■□ 3.24
MTHFD1L-201ENST00000367307 NUP160Q12769 1436 aa35.23■■■■□ 3.23
MTHFD1L-201ENST00000367307 FHAD1B1AJZ9 1412 aa35.22■■■■□ 3.23
MTHFD1L-201ENST00000367307 CEP170Q5SW79 1584 aa35.19■■■■□ 3.22
MTHFD1L-201ENST00000367307 ERICH3Q5RHP9 1530 aa35.16■■■■□ 3.22
MTHFD1L-201ENST00000367307 ERCC6L2Q5T890 1561 aa35.16■■■■□ 3.22
MTHFD1L-201ENST00000367307 SHROOM2Q13796 1616 aa35.01■■■■□ 3.19
MTHFD1L-201ENST00000367307 PRG4Q92954 1404 aaPredicted RBP34.89■■■■□ 3.18
MTHFD1L-201ENST00000367307 JPH4Q96JJ6 628 aa34.88■■■■□ 3.17
MTHFD1L-201ENST00000367307 IGF1RP08069 1367 aa34.79■■■■□ 3.16
MTHFD1L-201ENST00000367307 RUSC2Q8N2Y8 1516 aa34.79■■■■□ 3.16
Retrieved 100 of 20,778 RNA–protein pairs in 12.2 ms