Protein–RNA interactions for Protein: P55055

NR1H2, Oxysterols receptor LXR-beta, humanhuman

Predictions only

Length 460 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
NR1H2P55055 RABEP2-202ENST00000358201 2821 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 RHOB-201ENST00000272233 2372 ntAPPRIS P1 BASIC18.19■□□□□ 0.5
NR1H2P55055 SCARB1-203ENST00000415380 2731 ntTSL 2 BASIC18.19■□□□□ 0.5
NR1H2P55055 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 ADAMTS7-201ENST00000388820 5490 ntAPPRIS P1 TSL 1 (best) BASIC18.19■□□□□ 0.5
NR1H2P55055 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 PTTG1IP-204ENST00000445724 2497 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H2P55055 CERS4-208ENST00000559336 1515 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 C2CD2L-201ENST00000336702 4771 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 SLC25A48-201ENST00000274513 1880 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H2P55055 SLC25A20-201ENST00000319017 1879 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 NMRAL1-213ENST00000574733 1719 ntAPPRIS P1 TSL 5 BASIC18.18■□□□□ 0.5
NR1H2P55055 TDP2-202ENST00000378198 2071 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 EPS8L1-209ENST00000588359 1407 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H2P55055 WIZP1-201ENST00000531444 2299 ntBASIC18.18■□□□□ 0.5
NR1H2P55055 EFTUD1P1-204ENST00000560401 1798 ntBASIC18.18■□□□□ 0.5
NR1H2P55055 TRAPPC5-201ENST00000317378 790 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 PBX1-209ENST00000485769 834 ntTSL 2 BASIC18.18■□□□□ 0.5
NR1H2P55055 TRIM35-203ENST00000521253 1215 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 OGFR-204ENST00000621591 1194 ntTSL 5 BASIC18.18■□□□□ 0.5
NR1H2P55055 ZNF768-202ENST00000562803 1999 ntAPPRIS ALT2 TSL 3 BASIC18.18■□□□□ 0.5
NR1H2P55055 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 LCORL-201ENST00000326877 5604 ntTSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 NAT16-204ENST00000455377 1492 ntAPPRIS P2 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 NKD2-202ENST00000296849 2155 ntAPPRIS P3 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 MREG-201ENST00000263268 1314 ntAPPRIS P1 TSL 2 BASIC18.18■□□□□ 0.5
NR1H2P55055 MMP23B-201ENST00000356026 1326 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 PDLIM4-201ENST00000253754 2282 ntAPPRIS P1 TSL 1 (best) BASIC18.18■□□□□ 0.5
NR1H2P55055 MAFF-201ENST00000338483 2490 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 CBS-203ENST00000398158 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 CLUH-201ENST00000435359 5224 ntAPPRIS P2 TSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 OPN5-204ENST00000489301 1931 ntAPPRIS ALT2 TSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 TM9SF1-203ENST00000524835 1938 ntTSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 CBR1-205ENST00000530908 1924 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 CBSL-206ENST00000624406 2453 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 AC132008.2-203ENST00000418868 1552 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 SLC25A46-202ENST00000447245 1575 ntTSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 QPRT-202ENST00000395384 2343 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 ZNF133-210ENST00000535822 2341 ntTSL 3 BASIC18.17■□□□□ 0.5
NR1H2P55055 PRR5-201ENST00000006251 1767 ntTSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 ACBD4-203ENST00000398322 1986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 RBM17P2-201ENST00000616397 1405 ntBASIC18.17■□□□□ 0.5
NR1H2P55055 DYNLT3-201ENST00000378578 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 MIPEPP3-201ENST00000412105 444 ntBASIC18.17■□□□□ 0.5
NR1H2P55055 AL121761.1-202ENST00000412571 415 ntTSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 AP2S1-207ENST00000599990 829 ntAPPRIS ALT1 TSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 TARDBP-228ENST00000629725 1031 ntTSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 AC066615.1-201ENST00000640911 628 ntBASIC18.17■□□□□ 0.5
NR1H2P55055 DPP3P2-201ENST00000416030 1696 ntBASIC18.17■□□□□ 0.5
NR1H2P55055 CAMKV-205ENST00000467248 1688 ntTSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 SPATS2L-218ENST00000451764 2250 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 SNAP23-201ENST00000249647 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 STX3-201ENST00000337979 3299 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 DNM1-211ENST00000627061 2724 ntTSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 ITGB7-209ENST00000550743 2138 ntTSL 5 BASIC18.17■□□□□ 0.5
NR1H2P55055 EIF3C-211ENST00000566866 2986 ntAPPRIS P1 TSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 TBC1D10A-204ENST00000403477 1950 ntAPPRIS ALT2 TSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 FDXR-204ENST00000442102 1967 ntTSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 MOB3C-202ENST00000319928 2822 ntAPPRIS P1 TSL 2 BASIC18.17■□□□□ 0.5
NR1H2P55055 SNX24-211ENST00000513881 1563 ntTSL 1 (best) BASIC18.17■□□□□ 0.5
NR1H2P55055 LLGL2-203ENST00000392550 3509 ntAPPRIS P2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 ANAPC13-204ENST00000510994 1840 ntAPPRIS P1 TSL 2 BASIC18.16■□□□□ 0.5
NR1H2P55055 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 SLC47A2-201ENST00000325411 2258 ntAPPRIS P3 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 LRPPRC-202ENST00000409659 1610 ntTSL 5 BASIC18.16■□□□□ 0.5
NR1H2P55055 ASIC3-202ENST00000349064 1895 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 ZNF517-201ENST00000359971 2335 ntAPPRIS P1 TSL 4 BASIC18.16■□□□□ 0.5
NR1H2P55055 SNTB2-201ENST00000336278 9789 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 OIP5-201ENST00000220514 1236 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 RPL29-204ENST00000479017 670 ntAPPRIS P1 TSL 3 BASIC18.16■□□□□ 0.5
NR1H2P55055 AP000785.1-201ENST00000527314 613 ntTSL 4 BASIC18.16■□□□□ 0.5
NR1H2P55055 FBXL12-203ENST00000586073 582 ntTSL 2 BASIC18.16■□□□□ 0.5
NR1H2P55055 ETHE1-205ENST00000600651 1052 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 FGF8-207ENST00000618991 856 ntTSL 3 BASIC18.16■□□□□ 0.5
NR1H2P55055 AC093762.2-201ENST00000641700 291 ntAPPRIS P1 BASIC18.16■□□□□ 0.5
NR1H2P55055 TBC1D4-204ENST00000431480 6347 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 PIGQ-206ENST00000422307 2052 ntTSL 3 BASIC18.16■□□□□ 0.5
NR1H2P55055 PTGER3-201ENST00000306666 2333 ntAPPRIS ALT2 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 CENPN-201ENST00000299572 1398 ntTSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 SLC25A46-201ENST00000355943 2385 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 GPR139-202ENST00000570682 1613 ntAPPRIS P1 TSL 1 (best) BASIC18.16■□□□□ 0.5
NR1H2P55055 PCDHA13-201ENST00000289272 5260 ntAPPRIS P2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 ATG101-201ENST00000336854 1439 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 AC087457.1-201ENST00000503496 2727 ntTSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 IGSF9B-206ENST00000533871 5050 ntAPPRIS P2 TSL 5 BASIC18.15■□□□□ 0.5
NR1H2P55055 CLIP2-202ENST00000361545 5445 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 ATPAF1-214ENST00000576409 4158 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 HSD17B12-201ENST00000278353 2571 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 MAEA-201ENST00000264750 2058 ntTSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 AC006333.2-201ENST00000607957 2099 ntBASIC18.15■□□□□ 0.5
NR1H2P55055 FITM1-201ENST00000267426 1194 ntAPPRIS P1 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 RNPS1-201ENST00000301730 1276 ntAPPRIS P1 TSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 ZNF295-AS1-201ENST00000412906 952 ntTSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 KRBOX1-AS1-201ENST00000447834 2134 ntTSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 C17orf107-202ENST00000521575 1275 ntAPPRIS ALT2 TSL 1 (best) BASIC18.15■□□□□ 0.5
NR1H2P55055 PHB2-213ENST00000546111 858 ntTSL 2 BASIC18.15■□□□□ 0.5
NR1H2P55055 AC034102.6-201ENST00000550947 559 ntTSL 4 BASIC18.15■□□□□ 0.5
Retrieved 100 of 98,524 protein–RNA pairs in 46.6 ms