Protein–RNA interactions for Protein: P35900

KRT20, Keratin, type I cytoskeletal 20, humanhuman

Predictions only

Length 424 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
KRT20P35900 SLC5A10-205ENST00000417251 1984 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 PDLIM2-221ENST00000622702 1490 ntTSL 5 BASIC18.26■□□□□ 0.51
KRT20P35900 AC020763.4-201ENST00000623414 4170 ntBASIC18.26■□□□□ 0.51
KRT20P35900 ECE1-205ENST00000436918 2328 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 EPOR-208ENST00000592375 2086 ntTSL 2 BASIC18.26■□□□□ 0.51
KRT20P35900 AC124283.5-201ENST00000624661 1809 ntBASIC18.26■□□□□ 0.51
KRT20P35900 AC116351.2-201ENST00000606540 1585 ntBASIC18.25■□□□□ 0.51
KRT20P35900 CTSH-201ENST00000220166 2190 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 NDRG2-215ENST00000553503 2162 ntAPPRIS ALT1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 KIAA1549-201ENST00000422774 6283 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 NECAB3-202ENST00000375238 1942 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 MRGPRE-201ENST00000389832 1409 ntAPPRIS P1 TSL 2 BASIC18.25■□□□□ 0.51
KRT20P35900 HAUS4-204ENST00000490506 1447 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 ETV7-205ENST00000538992 1434 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT20P35900 GPR3-201ENST00000374024 2115 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 POFUT2-201ENST00000331343 4825 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 C17orf58-201ENST00000334461 1535 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT20P35900 ANKRD6-202ENST00000369408 5258 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 ZNF346-201ENST00000358149 2314 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 OLFM1-202ENST00000277415 1014 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 CHPF-202ENST00000373891 1079 ntTSL 2 BASIC18.25■□□□□ 0.51
KRT20P35900 FAM163B-202ENST00000496132 811 ntAPPRIS P1 TSL 3 BASIC18.25■□□□□ 0.51
KRT20P35900 AC026427.1-201ENST00000508993 555 ntTSL 3 BASIC18.25■□□□□ 0.51
KRT20P35900 IRX5-204ENST00000560154 879 ntTSL 5 BASIC18.25■□□□□ 0.51
KRT20P35900 NAT14-204ENST00000591590 1011 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 IRX5-205ENST00000620085 881 ntTSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 IL15RA-222ENST00000622442 1160 ntAPPRIS ALT2 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 EXTL3-201ENST00000220562 6483 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 FAM72C-202ENST00000584486 2297 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 LSR-214ENST00000621372 2274 ntAPPRIS P4 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 AC018553.1-201ENST00000616682 1458 ntBASIC18.25■□□□□ 0.51
KRT20P35900 CRKL-201ENST00000354336 5325 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 LRWD1-201ENST00000292616 2215 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 GJB3-202ENST00000373366 2217 ntAPPRIS P1 TSL 1 (best) BASIC18.25■□□□□ 0.51
KRT20P35900 AP001626.1-201ENST00000424890 2854 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 TNPO2-201ENST00000356861 4962 ntAPPRIS ALT1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 NAAA-206ENST00000507956 1300 ntAPPRIS ALT2 TSL 2 BASIC18.24■□□□□ 0.51
KRT20P35900 RDH13-203ENST00000415061 1871 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 SYT7-208ENST00000542670 1887 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT20P35900 C5orf17-202ENST00000512559 1984 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT20P35900 ASB18-201ENST00000409749 1401 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 AC007383.3-201ENST00000453039 1411 ntTSL 3 BASIC18.24■□□□□ 0.51
KRT20P35900 FBXL7-202ENST00000504595 4562 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 RNF169-201ENST00000299563 7823 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 AGFG1-201ENST00000310078 8668 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 GGT2-201ENST00000401924 2366 ntAPPRIS P1 TSL 5 BASIC18.24■□□□□ 0.51
KRT20P35900 GAS2L1-210ENST00000621062 2483 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 UBE2O-201ENST00000319380 5436 ntAPPRIS P2 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 MAL-201ENST00000309988 1112 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 LRRC26-201ENST00000371542 1209 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 GTF2A2-203ENST00000396061 758 ntAPPRIS P1 TSL 2 BASIC18.24■□□□□ 0.51
KRT20P35900 PSMB11-201ENST00000408907 2110 ntAPPRIS P1 BASIC18.24■□□□□ 0.51
KRT20P35900 POU5F1P3-201ENST00000428824 1078 ntBASIC18.24■□□□□ 0.51
KRT20P35900 CMTM3-207ENST00000564060 824 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT20P35900 CMTM3-211ENST00000565922 615 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 AC006058.3-201ENST00000606217 1069 ntBASIC18.24■□□□□ 0.51
KRT20P35900 AL121829.2-201ENST00000620908 328 ntBASIC18.24■□□□□ 0.51
KRT20P35900 HIGD1A-201ENST00000321331 1373 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 TRMU-202ENST00000381019 1381 ntTSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 RNF146-201ENST00000309649 2624 ntAPPRIS P3 TSL 4 BASIC18.24■□□□□ 0.51
KRT20P35900 GRB10-205ENST00000401949 2627 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 FDXR-217ENST00000582944 1766 ntTSL 2 BASIC18.24■□□□□ 0.51
KRT20P35900 SAXO1-202ENST00000380534 2099 ntAPPRIS P3 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 CYTH1-209ENST00000589296 2159 ntTSL 5 BASIC18.24■□□□□ 0.51
KRT20P35900 BRAF-201ENST00000288602 2480 ntAPPRIS P1 TSL 1 (best) BASIC18.24■□□□□ 0.51
KRT20P35900 TPPP3-204ENST00000562206 1410 ntAPPRIS P1 TSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 CMTM7-201ENST00000334983 2038 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 OGG1-203ENST00000302036 2220 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 SCARF1-202ENST00000348987 2619 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 SYDE2-202ENST00000341460 5512 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
KRT20P35900 KIAA1522-202ENST00000373480 5294 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 KIAA1522-203ENST00000373481 5293 ntAPPRIS ALT2 TSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 CSPG5-202ENST00000383738 4161 ntAPPRIS ALT2 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 ZDHHC3-205ENST00000424952 2687 ntAPPRIS P1 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 ACTR8-202ENST00000482349 2091 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 PRKCSH-209ENST00000589838 1898 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 SLC1A6-202ENST00000430939 1794 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 DDR1-228ENST00000376575 732 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 AC079145.1-201ENST00000416575 541 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 CCDC107-206ENST00000426546 1242 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 LINC00969-218ENST00000452844 583 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT20P35900 TTTY14-205ENST00000454875 544 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 LINC00969-221ENST00000457233 1279 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 ZNF529-AS1-202ENST00000475219 1033 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 LCN6-203ENST00000476567 1015 ntTSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 TSPAN14-209ENST00000481124 808 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 THEM4-205ENST00000489410 643 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 PNN-205ENST00000556530 601 ntTSL 2 BASIC18.23■□□□□ 0.51
KRT20P35900 MIR4651-201ENST00000582622 73 ntBASIC18.23■□□□□ 0.51
KRT20P35900 AC008403.3-201ENST00000598924 454 ntBASIC18.23■□□□□ 0.51
KRT20P35900 ADD3-AS1-204ENST00000627565 388 ntTSL 3 BASIC18.23■□□□□ 0.51
KRT20P35900 SLC22A23-203ENST00000406686 5658 ntAPPRIS P2 TSL 5 BASIC18.23■□□□□ 0.51
KRT20P35900 DAG1-222ENST00000545947 5829 ntAPPRIS P1 TSL 5 BASIC18.23■□□□□ 0.51
KRT20P35900 LRRC27-203ENST00000368613 2113 ntAPPRIS P3 TSL 1 (best) BASIC18.23■□□□□ 0.51
KRT20P35900 DIAPH1-201ENST00000253811 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KRT20P35900 DIAPH1-202ENST00000389054 5795 ntAPPRIS P4 TSL 5 BASIC18.23■□□□□ 0.51
KRT20P35900 DIAPH1-204ENST00000398557 5789 ntAPPRIS ALT2 TSL 5 BASIC18.23■□□□□ 0.51
KRT20P35900 KMT5B-206ENST00000405515 2869 ntTSL 5 BASIC18.23■□□□□ 0.51
Retrieved 100 of 98,524 protein–RNA pairs in 22.6 ms