RNA–Protein interactions for RNA: ENST00000274605.5

N4BP3-201, Transcript of NEDD4 binding protein 3, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene N4BP3, Length 6,080 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
N4BP3-201ENST00000274605 DCAF8L2P0C7V8 631 aa31.39■■■□□ 2.62
N4BP3-201ENST00000274605 SUPT5HO00267 1087 aaKnown RBP29.74■■■□□ 2.35
N4BP3-201ENST00000274605 SHROOM4Q9ULL8 1493 aa29.24■■■□□ 2.27
N4BP3-201ENST00000274605 NISCHQ9Y2I1 1504 aa29.23■■■□□ 2.27
N4BP3-201ENST00000274605 EHMT2Q96KQ7 1210 aa29.11■■■□□ 2.25
N4BP3-201ENST00000274605 APLP2Q06481 763 aa28.23■■■□□ 2.11
N4BP3-201ENST00000274605 FAM9AQ8IZU1 332 aaPredicted RBP28.16■■■□□ 2.1
N4BP3-201ENST00000274605 TTBK1Q5TCY1 1321 aaPredicted RBP28.1■■■□□ 2.09
N4BP3-201ENST00000274605 PELP1Q8IZL8 1130 aaKnown RBP28.06■■■□□ 2.08
N4BP3-201ENST00000274605 RANGAP1P46060 587 aaPredicted RBP27.77■■■□□ 2.04
N4BP3-201ENST00000274605 PCGF6Q9BYE7 350 aa27.77■■■□□ 2.04
N4BP3-201ENST00000274605 ATP1B4Q9UN42 357 aaPredicted RBP27.46■■□□□ 1.99
N4BP3-201ENST00000274605 TRIM41Q8WV44 630 aa27.42■■□□□ 1.98
N4BP3-201ENST00000274605 CCER1Q8TC90 406 aaPredicted RBP27.31■■□□□ 1.96
N4BP3-201ENST00000274605 UBTFP17480 764 aaKnown RBP27.2■■□□□ 1.94
N4BP3-201ENST00000274605 CENPBP07199 599 aaPredicted RBP27.14■■□□□ 1.94
N4BP3-201ENST00000274605 ERICH6Q7L0X2 663 aa27.09■■□□□ 1.93
N4BP3-201ENST00000274605 ZEB1P37275 1124 aaPredicted RBP27.08■■□□□ 1.93
N4BP3-201ENST00000274605 PPARGC1BQ86YN6 1023 aaKnown RBP26.96■■□□□ 1.91
N4BP3-201ENST00000274605 YTHDC1Q96MU7 727 aaKnown RBP26.89■■□□□ 1.89
N4BP3-201ENST00000274605 NEFLP07196 543 aa26.67■■□□□ 1.86
N4BP3-201ENST00000274605 ITGAEP38570 1179 aa26.51■■□□□ 1.83
N4BP3-201ENST00000274605 TRIM26Q12899 539 aaPredicted RBP26.41■■□□□ 1.82
N4BP3-201ENST00000274605 HNRNPUL2-BSCL2H3BQZ7 746 aaPredicted RBP26.41■■□□□ 1.82
N4BP3-201ENST00000274605 HNRNPUL2Q1KMD3 747 aaKnown RBP26.41■■□□□ 1.82
N4BP3-201ENST00000274605 MYT1LQ9UL68 1186 aa26.4■■□□□ 1.82
N4BP3-201ENST00000274605 POLR3GLQ9BT43 218 aa26.37■■□□□ 1.81
N4BP3-201ENST00000274605 LOC105371045A0A1W2PR82 267 aa26.32■■□□□ 1.8
N4BP3-201ENST00000274605 CNGB1Q14028 1251 aaPredicted RBP26.21■■□□□ 1.79
N4BP3-201ENST00000274605 HRCP23327 699 aa26.14■■□□□ 1.78
N4BP3-201ENST00000274605 CHIC1Q5VXU3 224 aa26.07■■□□□ 1.76
N4BP3-201ENST00000274605 DAXXQ9UER7 740 aaPredicted RBP25.96■■□□□ 1.75
N4BP3-201ENST00000274605 SLC4A1APQ9BWU0 796 aaKnown RBP25.87■■□□□ 1.73
N4BP3-201ENST00000274605 MYT1Q01538 1121 aa25.74■■□□□ 1.71
N4BP3-201ENST00000274605 FAM50AQ14320 339 aaKnown RBP25.74■■□□□ 1.71
N4BP3-201ENST00000274605 PABPN1Q86U42 306 aaKnown RBP eCLIP25.69■■□□□ 1.7
N4BP3-201ENST00000274605 TRIM52Q96A61 297 aa25.61■■□□□ 1.69
N4BP3-201ENST00000274605 DIEXFQ68CQ4 756 aaKnown RBP25.6■■□□□ 1.69
N4BP3-201ENST00000274605 NEUROD1Q13562 356 aa25.56■■□□□ 1.68
N4BP3-201ENST00000274605 ABCC9O60706 1549 aa25.54■■□□□ 1.68
N4BP3-201ENST00000274605 CLSPNQ9HAW4 1339 aa25.49■■□□□ 1.67
N4BP3-201ENST00000274605 ZNF316A6NFI3 1004 aaPredicted RBP25.38■■□□□ 1.65
N4BP3-201ENST00000274605 ZNF326Q5BKZ1 582 aaKnown RBP25.38■■□□□ 1.65
N4BP3-201ENST00000274605 FBLN2P98095 1184 aa25.32■■□□□ 1.64
N4BP3-201ENST00000274605 BCANQ96GW7 911 aa25.3■■□□□ 1.64
N4BP3-201ENST00000274605 RTL5Q5HYW3 569 aaPredicted RBP25.27■■□□□ 1.64
N4BP3-201ENST00000274605 ARID3CA6NKF2 412 aa25.18■■□□□ 1.62
N4BP3-201ENST00000274605 ANP32CO43423 234 aa25.16■■□□□ 1.62
N4BP3-201ENST00000274605 P3H3Q8IVL6 736 aa25.15■■□□□ 1.62
N4BP3-201ENST00000274605 GTF3C3Q9Y5Q9 886 aa25.08■■□□□ 1.6
N4BP3-201ENST00000274605 BCL11AQ9H165 835 aa25.04■■□□□ 1.6
N4BP3-201ENST00000274605 SLC24A1O60721 1099 aa25.01■■□□□ 1.59
N4BP3-201ENST00000274605 ZBTB47Q9UFB7 747 aaPredicted RBP24.95■■□□□ 1.58
N4BP3-201ENST00000274605 ZNF777Q9ULD5 760 aaPredicted RBP24.93■■□□□ 1.58
N4BP3-201ENST00000274605 CDK11AQ9UQ88 783 aaPredicted RBP24.92■■□□□ 1.58
N4BP3-201ENST00000274605 CANXP27824 592 aaKnown RBP24.91■■□□□ 1.58
N4BP3-201ENST00000274605 CSRNP3Q8WYN3 585 aa24.86■■□□□ 1.57
N4BP3-201ENST00000274605 NEFMP07197 916 aa24.75■■□□□ 1.55
N4BP3-201ENST00000274605 CHGAP10645 457 aaKnown RBP24.6■■□□□ 1.53
N4BP3-201ENST00000274605 PLPPR3Q6T4P5 718 aa24.59■■□□□ 1.53
N4BP3-201ENST00000274605 NPM2Q86SE8 214 aaKnown RBP24.59■■□□□ 1.53
N4BP3-201ENST00000274605 ACIN1Q9UKV3 1341 aaKnown RBP24.59■■□□□ 1.53
N4BP3-201ENST00000274605 SCRIBQ14160 1630 aa24.55■■□□□ 1.52
N4BP3-201ENST00000274605 ESF1Q9H501 851 aaKnown RBP24.52■■□□□ 1.52
N4BP3-201ENST00000274605 TONSLQ96HA7 1378 aa24.51■■□□□ 1.51
N4BP3-201ENST00000274605 ANP32AP39687 249 aaKnown RBP24.5■■□□□ 1.51
N4BP3-201ENST00000274605 STAG3Q9UJ98 1225 aa24.49■■□□□ 1.51
N4BP3-201ENST00000274605 CHIC2Q9UKJ5 165 aa24.45■■□□□ 1.5
N4BP3-201ENST00000274605 FKBP8Q14318 412 aa24.45■■□□□ 1.5
N4BP3-201ENST00000274605 SALL2Q9Y467 1007 aaPredicted RBP24.44■■□□□ 1.5
N4BP3-201ENST00000274605 FAM9BQ8IZU0 186 aa24.44■■□□□ 1.5
N4BP3-201ENST00000274605 DDX10Q13206 875 aaKnown RBP24.43■■□□□ 1.5
N4BP3-201ENST00000274605 HNRNPUQ00839 825 aaKnown RBP eCLIP24.4■■□□□ 1.5
N4BP3-201ENST00000274605 GRWD1Q9BQ67 446 aaKnown RBP eCLIP24.4■■□□□ 1.5
N4BP3-201ENST00000274605 NPM1P06748 294 aaKnown RBP eCLIP24.31■■□□□ 1.48
N4BP3-201ENST00000274605 KDM2AQ9Y2K7 1162 aa24.26■■□□□ 1.47
N4BP3-201ENST00000274605 HSP90AA1P07900 732 aaKnown RBP24.24■■□□□ 1.47
N4BP3-201ENST00000274605 TMC1Q8TDI8 760 aa24.2■■□□□ 1.47
N4BP3-201ENST00000274605 HIRIP3Q9BW71 556 aaPredicted RBP24.17■■□□□ 1.46
N4BP3-201ENST00000274605 SENP3Q9H4L4 574 aaPredicted RBP24.16■■□□□ 1.46
N4BP3-201ENST00000274605 UPF2Q9HAU5 1272 aaKnown RBP24.14■■□□□ 1.45
N4BP3-201ENST00000274605 DCAF1Q9Y4B6 1507 aa24.13■■□□□ 1.45
N4BP3-201ENST00000274605 TSPY4P0CV99 314 aa24.12■■□□□ 1.45
N4BP3-201ENST00000274605 TSPY10P0CW01 314 aa24.12■■□□□ 1.45
N4BP3-201ENST00000274605 WDR43Q15061 677 aaKnown RBP eCLIP24.11■■□□□ 1.45
N4BP3-201ENST00000274605 ZCCHC6Q5VYS8 1495 aaKnown RBP24.11■■□□□ 1.45
N4BP3-201ENST00000274605 MTUS2Q5JR59 1369 aa24.1■■□□□ 1.45
N4BP3-201ENST00000274605 CCDC136Q96JN2 1154 aa24.09■■□□□ 1.45
N4BP3-201ENST00000274605 MRS2Q9HD23 443 aa24.09■■□□□ 1.45
N4BP3-201ENST00000274605 ANP32BQ92688 251 aaKnown RBP24.07■■□□□ 1.44
N4BP3-201ENST00000274605 CHMP7Q8WUX9 453 aaPredicted RBP24.07■■□□□ 1.44
N4BP3-201ENST00000274605 IRX6P78412 446 aaPredicted RBP24.06■■□□□ 1.44
N4BP3-201ENST00000274605 SCAF1Q9H7N4 1312 aaKnown RBP24.05■■□□□ 1.44
N4BP3-201ENST00000274605 RRP7BPQ9NSQ0 103 aa24.04■■□□□ 1.44
N4BP3-201ENST00000274605 GOLGA6L2Q8N9W4 650 aaPredicted RBP24.01■■□□□ 1.43
N4BP3-201ENST00000274605 PLEKHG5O94827 1062 aa24■■□□□ 1.43
N4BP3-201ENST00000274605 NBR1Q14596 966 aa23.98■■□□□ 1.43
N4BP3-201ENST00000274605 MIER1Q8N108 512 aa23.98■■□□□ 1.43
N4BP3-201ENST00000274605 EIF5BO60841 1220 aaKnown RBP23.97■■□□□ 1.43
N4BP3-201ENST00000274605 ARXQ96QS3 562 aa23.96■■□□□ 1.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.6 ms