Protein–RNA interactions for Protein: P27797

CALR, Calreticulin, humanhuman

Known RBP Predictions only

Length 417 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CALRP27797 RAB7A-201ENST00000265062 2244 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALRP27797 FAM208A-201ENST00000355628 5239 ntAPPRIS ALT2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALRP27797 YY1AP1-210ENST00000368339 3073 ntAPPRIS ALT2 TSL 2 BASIC18.35■□□□□ 0.53
CALRP27797 SCN3B-202ENST00000392770 6061 ntAPPRIS P1 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALRP27797 FAM53A-201ENST00000308132 2802 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CALRP27797 COQ8A-203ENST00000366779 5523 ntAPPRIS P1 TSL 2 BASIC18.35■□□□□ 0.53
CALRP27797 OTUB1-210ENST00000541478 1803 ntTSL 5 BASIC18.35■□□□□ 0.53
CALRP27797 LRP10-201ENST00000359591 6886 ntAPPRIS P2 TSL 1 (best) BASIC18.35■□□□□ 0.53
CALRP27797 SFXN1-201ENST00000321442 4231 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 RBM42-201ENST00000262633 1680 ntAPPRIS P2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 ZNF622-201ENST00000308683 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 GNB1L-202ENST00000403325 1699 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 GNAI1-201ENST00000351004 3347 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 TAF5L-201ENST00000258281 3112 ntAPPRIS P1 TSL 5 BASIC18.34■□□□□ 0.53
CALRP27797 MIB2-202ENST00000378708 3012 ntAPPRIS ALT2 TSL 5 BASIC18.34■□□□□ 0.53
CALRP27797 COQ10B-201ENST00000263960 2239 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 SYTL1-208ENST00000543823 2229 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 RMI2-201ENST00000312499 1457 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 FAM107A-203ENST00000447756 1432 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 NUDT16L1-204ENST00000586536 1406 ntTSL 2 BASIC18.34■□□□□ 0.53
CALRP27797 RREB1-202ENST00000349384 7440 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 BMP7-201ENST00000395863 4013 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 COX20-203ENST00000411948 2631 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 NUMBL-202ENST00000540131 1931 ntAPPRIS ALT2 TSL 2 BASIC18.34■□□□□ 0.53
CALRP27797 SPAG16-201ENST00000272898 1059 ntTSL 5 BASIC18.34■□□□□ 0.53
CALRP27797 SSC5D-202ENST00000587166 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 PGAM5-204ENST00000543955 1773 ntTSL 2 BASIC18.34■□□□□ 0.53
CALRP27797 SIPA1-209ENST00000534313 3521 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 DDIT4-201ENST00000307365 1748 ntAPPRIS P1 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 AC121338.2-201ENST00000622535 1744 ntBASIC18.34■□□□□ 0.53
CALRP27797 PANO1-201ENST00000620120 1680 ntAPPRIS P1 BASIC18.34■□□□□ 0.53
CALRP27797 FIP1L1-202ENST00000337488 2198 ntTSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 QRICH2-205ENST00000636395 5677 ntAPPRIS ALT2 TSL 1 (best) BASIC18.34■□□□□ 0.53
CALRP27797 PRR5-ARHGAP8-201ENST00000352766 2043 ntAPPRIS P1 TSL 2 BASIC18.33■□□□□ 0.53
CALRP27797 GCH1-207ENST00000622544 2923 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALRP27797 EMC8-202ENST00000435200 1935 ntTSL 2 BASIC18.33■□□□□ 0.53
CALRP27797 ISLR2-202ENST00000419208 2306 ntTSL 1 (best) BASIC18.33■□□□□ 0.53
CALRP27797 DOK4-201ENST00000340099 2772 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALRP27797 RRBP1-204ENST00000377813 5041 ntAPPRIS ALT2 TSL 1 (best) BASIC18.33■□□□□ 0.53
CALRP27797 SKOR1-204ENST00000554240 3597 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.53
CALRP27797 RFTN1-201ENST00000334133 2982 ntAPPRIS P2 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 TMEM170A-202ENST00000561878 1072 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 LAT-217ENST00000630764 610 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALRP27797 LDHD-201ENST00000300051 2067 ntAPPRIS P3 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 OSCAR-208ENST00000611261 2061 ntAPPRIS P4 TSL 5 BASIC18.33■□□□□ 0.52
CALRP27797 SPAG1-201ENST00000251809 3748 ntAPPRIS P1 TSL 5 BASIC18.33■□□□□ 0.52
CALRP27797 DNAJC5-201ENST00000360864 5213 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 NLGN4X-203ENST00000381093 5865 ntAPPRIS P2 TSL 2 BASIC18.33■□□□□ 0.52
CALRP27797 CAPN5-205ENST00000529629 2333 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 SNUPN-201ENST00000308588 1513 ntAPPRIS P1 TSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 POFUT1-201ENST00000375730 1507 ntTSL 1 (best) BASIC18.33■□□□□ 0.52
CALRP27797 EEF1D-203ENST00000419152 1452 ntAPPRIS ALT2 TSL 5 BASIC18.33■□□□□ 0.52
CALRP27797 AC007225.1-201ENST00000566331 1836 ntBASIC18.33■□□□□ 0.52
CALRP27797 FHL1-219ENST00000618438 2178 ntTSL 3 BASIC18.32■□□□□ 0.52
CALRP27797 NARF-205ENST00000412079 1760 ntTSL 5 BASIC18.32■□□□□ 0.52
CALRP27797 ASB7-203ENST00000558747 2133 ntTSL 5 BASIC18.32■□□□□ 0.52
CALRP27797 PRDM12-201ENST00000253008 2476 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 NYX-201ENST00000342595 2713 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 AP000347.2-202ENST00000421064 3041 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 NFE2L3-201ENST00000056233 3686 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 EIF4G1-212ENST00000424196 5653 ntTSL 2 BASIC18.32■□□□□ 0.52
CALRP27797 OSBPL1A-204ENST00000399443 3317 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 EHD3-201ENST00000322054 4636 ntAPPRIS P1 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 ARFIP2-205ENST00000525235 852 ntTSL 2 BASIC18.32■□□□□ 0.52
CALRP27797 GPAA1-202ENST00000361036 1840 ntTSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 RNF187-201ENST00000305943 3017 ntAPPRIS ALT2 TSL 1 (best) BASIC18.32■□□□□ 0.52
CALRP27797 AC005906.2-203ENST00000640962 2091 ntTSL 5 BASIC18.32■□□□□ 0.52
CALRP27797 OPA1-204ENST00000361828 6381 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CALRP27797 DTX3-201ENST00000337737 2029 ntAPPRIS P3 TSL 2 BASIC18.32■□□□□ 0.52
CALRP27797 RASGRF1-202ENST00000419573 6294 ntTSL 2 BASIC18.32■□□□□ 0.52
CALRP27797 MTMR14-206ENST00000420925 1427 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CALRP27797 HOMER3-203ENST00000433218 1418 ntAPPRIS ALT1 TSL 5 BASIC18.32■□□□□ 0.52
CALRP27797 CAPRIN1-207ENST00000529307 2266 ntAPPRIS ALT2 TSL 2 BASIC18.32■□□□□ 0.52
CALRP27797 TCF3P1-201ENST00000423021 1937 ntBASIC18.31■□□□□ 0.52
CALRP27797 TCEA1-201ENST00000396401 2718 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 ATXN2-219ENST00000550104 4648 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 DDX31-201ENST00000310532 2408 ntTSL 2 BASIC18.31■□□□□ 0.52
CALRP27797 ARL15-201ENST00000502271 3248 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 AL354751.1-201ENST00000412768 1863 ntBASIC18.31■□□□□ 0.52
CALRP27797 HELZ2-204ENST00000467148 8064 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 ITGB2-207ENST00000397854 2592 ntTSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 HOXC-AS1-201ENST00000505700 548 ntTSL 2 BASIC18.31■□□□□ 0.52
CALRP27797 PPM1D-201ENST00000305921 4778 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 ZNF131-206ENST00000505606 3209 ntAPPRIS P1 TSL 5 BASIC18.31■□□□□ 0.52
CALRP27797 AC093484.2-201ENST00000580996 2166 ntBASIC18.31■□□□□ 0.52
CALRP27797 SMUG1-215ENST00000508394 1697 ntAPPRIS P1 TSL 2 BASIC18.31■□□□□ 0.52
CALRP27797 TPD52L1-213ENST00000534000 2356 ntAPPRIS P3 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 ARNTL2-209ENST00000546179 1861 ntAPPRIS ALT2 TSL 2 BASIC18.31■□□□□ 0.52
CALRP27797 RAB11FIP1-201ENST00000287263 6253 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 CNOT6-207ENST00000618123 6250 ntAPPRIS P1 TSL 1 (best) BASIC18.31■□□□□ 0.52
CALRP27797 SHTN1-201ENST00000260777 5308 ntAPPRIS ALT2 TSL 2 BASIC18.3■□□□□ 0.52
CALRP27797 TRAM1-201ENST00000262213 2785 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALRP27797 SEPT5-210ENST00000455784 2070 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALRP27797 SNAI3-AS1-205ENST00000568633 2096 ntBASIC18.3■□□□□ 0.52
CALRP27797 PLEKHB2-204ENST00000409158 2277 ntTSL 2 BASIC18.3■□□□□ 0.52
CALRP27797 C6orf47-202ENST00000375911 2475 ntAPPRIS P1 BASIC18.3■□□□□ 0.52
CALRP27797 LRCH3-207ENST00000441090 2034 ntTSL 2 BASIC18.3■□□□□ 0.52
CALRP27797 NPR3-203ENST00000415167 1753 ntAPPRIS P3 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALRP27797 TMEM127-202ENST00000432959 3099 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
CALRP27797 CARD10-201ENST00000251973 3934 ntAPPRIS P1 TSL 1 (best) BASIC18.3■□□□□ 0.52
Retrieved 100 of 98,524 protein–RNA pairs in 23.3 ms