Protein–RNA interactions for Protein: Q9H0D6

XRN2, 5'-3' exoribonuclease 2, humanhuman

Known RBP eCLIP

Length 950 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
XRN2Q9H0D6 MLXIPL-203ENST00000354613 3215 ntTSL 1 (best) BASIC14.51□□□□□ -0.092e-7■■■■□ 19.9
XRN2Q9H0D6 MLXIPL-205ENST00000429400 3173 ntTSL 1 (best) BASIC14.38□□□□□ -0.112e-7■■■■□ 19.9
XRN2Q9H0D6 MLXIPL-204ENST00000414749 3224 ntAPPRIS ALT2 TSL 1 (best) BASIC14.03□□□□□ -0.162e-7■■■■□ 19.9
XRN2Q9H0D6 MLXIPL-202ENST00000345114 3079 ntTSL 1 (best)13.38□□□□□ -0.272e-7■■■■□ 19.9
XRN2Q9H0D6 SF3A2-203ENST00000587637 501 ntTSL 220.61■□□□□ 0.891e-6■■■■□ 19.9
XRN2Q9H0D6 SF3A2-206ENST00000592314 885 ntTSL 518.36■□□□□ 0.531e-6■■■■□ 19.9
XRN2Q9H0D6 SF3A2-201ENST00000221494 1963 ntAPPRIS P2 TSL 1 (best) BASIC16.02■□□□□ 0.161e-6■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-204ENST00000428708 2095 ntAPPRIS ALT2 TSL 1 (best) BASIC18.95■□□□□ 0.623e-7■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-219ENST00000575245 2229 ntTSL 5 BASIC17.12■□□□□ 0.333e-7■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-205ENST00000435091 2129 ntAPPRIS ALT2 TSL 1 (best) BASIC16.92■□□□□ 0.33e-7■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-201ENST00000321280 1939 ntAPPRIS ALT2 TSL 1 (best) BASIC16.42■□□□□ 0.223e-7■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-209ENST00000572329 2133 ntTSL 216.04■□□□□ 0.163e-7■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-220ENST00000575712 2512 ntAPPRIS ALT2 TSL 1 (best) BASIC15.33■□□□□ 0.043e-7■■■■□ 19.9
XRN2Q9H0D6 BAIAP2-202ENST00000321300 2879 ntAPPRIS P4 TSL 1 (best) BASIC13.18□□□□□ -0.33e-7■■■■□ 19.9
XRN2Q9H0D6 PAM16-215ENST00000577031 548 ntTSL 4 BASIC18.07■□□□□ 0.482e-6■■■■□ 19.9
XRN2Q9H0D6 GNG4-202ENST00000366598 1721 ntAPPRIS P1 TSL 1 (best) BASIC15.92■□□□□ 0.142e-6■■■■□ 19.9
XRN2Q9H0D6 GNG4-204ENST00000450593 4978 ntAPPRIS P1 TSL 4 BASIC12.7□□□□□ -0.382e-6■■■■□ 19.9
XRN2Q9H0D6 ZFPM1-201ENST00000319555 5380 ntAPPRIS P1 TSL 1 (best) BASIC23.71■■□□□ 1.392e-6■■■■□ 19.8
XRN2Q9H0D6 UBALD2-203ENST00000589240 660 ntTSL 2 BASIC33.65■■■□□ 2.981e-10■■■■□ 19.8
XRN2Q9H0D6 UBALD2-201ENST00000327490 1593 ntAPPRIS P1 TSL 1 (best) BASIC26.96■■□□□ 1.911e-10■■■■□ 19.8
XRN2Q9H0D6 MVD-211ENST00000565720 436 ntTSL 322.05■■□□□ 1.128e-8■■■■□ 19.8
XRN2Q9H0D6 HMGCR-208ENST00000509431 421 ntTSL 217.58■□□□□ 0.45e-7■■■■□ 19.8
XRN2Q9H0D6 UBALD2-202ENST00000587913 286 ntTSL 313.59□□□□□ -0.231e-10■■■■□ 19.8
XRN2Q9H0D6 HMGCR-201ENST00000287936 4585 ntAPPRIS P1 TSL 1 (best) BASIC10.11□□□□□ -0.795e-7■■■■□ 19.8
XRN2Q9H0D6 HMGCR-202ENST00000343975 3681 ntTSL 1 (best) BASIC9.12□□□□□ -0.955e-7■■■■□ 19.8
XRN2Q9H0D6 HMGCR-209ENST00000511206 3395 ntAPPRIS P1 TSL 2 BASIC6.85□□□□□ -1.315e-7■■■■□ 19.8
XRN2Q9H0D6 OAZ1-205ENST00000589361 679 ntTSL 1 (best)18.5■□□□□ 0.553e-16■■■■□ 19.8
XRN2Q9H0D6 GIPC1-205ENST00000586027 1386 ntAPPRIS P1 TSL 2 BASIC35.91■■■■□ 3.343e-6■■■■□ 19.8
XRN2Q9H0D6 QRICH1-205ENST00000430979 583 ntTSL 434.06■■■■□ 3.043e-6■■■■□ 19.8
XRN2Q9H0D6 QRICH1-206ENST00000437939 510 ntTSL 532.43■■■□□ 2.783e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-202ENST00000393028 1483 ntTSL 3 BASIC31.72■■■□□ 2.673e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-201ENST00000345425 1782 ntAPPRIS P1 TSL 1 (best) BASIC31.25■■■□□ 2.593e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-208ENST00000558856 574 ntTSL 430.38■■■□□ 2.455e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-210ENST00000559036 685 ntTSL 230.38■■■□□ 2.455e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-209ENST00000558983 847 ntTSL 330.06■■■□□ 2.45e-6■■■■□ 19.8
XRN2Q9H0D6 WDFY3-204ENST00000502713 425 ntTSL 329.69■■■□□ 2.343e-6■■■■□ 19.8
XRN2Q9H0D6 E4F1-202ENST00000562589 817 ntTSL 529.47■■■□□ 2.313e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL21-203ENST00000463043 667 ntTSL 5 BASIC29.37■■■□□ 2.293e-6■■■■□ 19.8
XRN2Q9H0D6 THOP1-204ENST00000585673 784 ntTSL 328.97■■■□□ 2.233e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-212ENST00000560493 732 ntTSL 428.4■■■□□ 2.145e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-214ENST00000461469 560 ntTSL 328.14■■■□□ 2.13e-6■■■■□ 19.8
XRN2Q9H0D6 MRPS34-202ENST00000397375 1024 ntAPPRIS P1 TSL 1 (best) BASIC27.76■■■□□ 2.033e-6■■■■□ 19.8
XRN2Q9H0D6 RHBDL1-203ENST00000450775 1566 ntTSL 227.57■■■□□ 23e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-203ENST00000393033 1926 ntAPPRIS P1 TSL 1 (best) BASIC26.83■■□□□ 1.893e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-211ENST00000444719 762 ntTSL 326.43■■□□□ 1.823e-6■■■■□ 19.8
XRN2Q9H0D6 GATA2-AS1-201ENST00000464242 1163 ntTSL 2 BASIC26.39■■□□□ 1.821e-7■■■■□ 19.8
XRN2Q9H0D6 C1orf35-201ENST00000272139 1427 ntAPPRIS P1 TSL 1 (best) BASIC26.09■■□□□ 1.773e-6■■■■□ 19.8
XRN2Q9H0D6 TSEN54-205ENST00000578415 994 ntTSL 325.85■■□□□ 1.733e-6■■■■□ 19.8
XRN2Q9H0D6 TRIM65-202ENST00000540128 886 ntTSL 325.53■■□□□ 1.683e-6■■■■□ 19.8
XRN2Q9H0D6 BDH1-211ENST00000468710 609 ntTSL 225.39■■□□□ 1.665e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-217ENST00000485985 644 ntTSL 225.35■■□□□ 1.653e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-205ENST00000430278 523 ntTSL 425.35■■□□□ 1.653e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-207ENST00000433968 578 ntTSL 425.35■■□□□ 1.653e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-210ENST00000434503 930 ntTSL 525.35■■□□□ 1.653e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-211ENST00000497928 711 ntTSL 525.25■■□□□ 1.633e-6■■■■□ 19.8
XRN2Q9H0D6 SLC39A5-203ENST00000419232 833 ntTSL 324.92■■□□□ 1.583e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-203ENST00000414218 451 ntTSL 524.8■■□□□ 1.563e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-209ENST00000434453 2229 ntTSL 524.76■■□□□ 1.553e-6■■■■□ 19.8
XRN2Q9H0D6 CMTM8-202ENST00000458535 996 ntTSL 1 (best) BASIC24.73■■□□□ 1.553e-6■■■■□ 19.8
XRN2Q9H0D6 PTPRU-203ENST00000415600 1590 ntTSL 524.51■■□□□ 1.512e-11■■■■□ 19.8
XRN2Q9H0D6 LMBR1-219ENST00000498034 478 ntTSL 324.5■■□□□ 1.513e-6■■■■□ 19.8
XRN2Q9H0D6 PRKCSH-216ENST00000592445 598 ntTSL 224.4■■□□□ 1.53e-6■■■■□ 19.8
XRN2Q9H0D6 BDH1-208ENST00000445160 539 ntTSL 524.4■■□□□ 1.55e-6■■■■□ 19.8
XRN2Q9H0D6 C1orf35-205ENST00000485896 1429 ntTSL 224.31■■□□□ 1.483e-6■■■■□ 19.8
XRN2Q9H0D6 LMBR1-208ENST00000434278 678 ntTSL 524.06■■□□□ 1.443e-6■■■■□ 19.8
XRN2Q9H0D6 E4F1-207ENST00000565413 940 ntTSL 324.05■■□□□ 1.443e-6■■■■□ 19.8
XRN2Q9H0D6 WWP1-210ENST00000523863 796 ntTSL 323.81■■□□□ 1.42e-11■■■■□ 19.8
XRN2Q9H0D6 KIAA1522-201ENST00000294521 878 ntAPPRIS ALT2 TSL 2 BASIC23.69■■□□□ 1.383e-6■■■■□ 19.8
XRN2Q9H0D6 BDH1-216ENST00000492681 544 ntTSL 523.65■■□□□ 1.385e-6■■■■□ 19.8
XRN2Q9H0D6 ENTPD2-201ENST00000312665 1500 ntTSL 1 (best) BASIC23.57■■□□□ 1.363e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL22-208ENST00000470335 824 ntTSL 223.08■■□□□ 1.296e-8■■■■□ 19.8
XRN2Q9H0D6 CMTM8-201ENST00000307526 1174 ntAPPRIS P1 TSL 1 (best) BASIC23.05■■□□□ 1.283e-6■■■■□ 19.8
XRN2Q9H0D6 KRT19-201ENST00000361566 1390 ntAPPRIS P1 TSL 1 (best) BASIC22.88■■□□□ 1.253e-6■■■■□ 19.8
XRN2Q9H0D6 POLRMT-201ENST00000587057 1229 ntTSL 522.65■■□□□ 1.225e-7■■■■□ 19.8
XRN2Q9H0D6 SLC39A5-208ENST00000447080 380 ntTSL 522.55■■□□□ 1.23e-6■■■■□ 19.8
XRN2Q9H0D6 KRT19-202ENST00000455635 641 ntTSL 322.49■■□□□ 1.193e-6■■■■□ 19.8
XRN2Q9H0D6 KLHL21-204ENST00000467612 1056 ntTSL 3 BASIC22.36■■□□□ 1.173e-6■■■■□ 19.8
XRN2Q9H0D6 GIPC1-210ENST00000589497 853 ntTSL 522.2■■□□□ 1.143e-6■■■■□ 19.8
XRN2Q9H0D6 WDFY3-208ENST00000509172 453 ntTSL 322.19■■□□□ 1.143e-6■■■■□ 19.8
XRN2Q9H0D6 POLRMT-203ENST00000589961 490 ntTSL 322.13■■□□□ 1.135e-7■■■■□ 19.8
XRN2Q9H0D6 ACSF3-202ENST00000378345 1541 ntTSL 1 (best) BASIC21.98■■□□□ 1.113e-6■■■■□ 19.8
XRN2Q9H0D6 MEF2A-207ENST00000558812 2186 ntTSL 2 BASIC21.86■■□□□ 1.095e-6■■■■□ 19.8
XRN2Q9H0D6 C19orf48-207ENST00000596655 1639 ntTSL 221.85■■□□□ 1.092e-8■■■■□ 19.8
XRN2Q9H0D6 ISG15-203ENST00000624697 788 ntAPPRIS ALT2 TSL 3 BASIC21.57■■□□□ 1.043e-6■■■■□ 19.8
XRN2Q9H0D6 E4F1-206ENST00000565090 2028 ntTSL 1 (best) BASIC21.49■■□□□ 1.033e-6■■■■□ 19.8
XRN2Q9H0D6 TBC1D9B-213ENST00000521669 592 ntTSL 221.47■■□□□ 1.033e-6■■■■□ 19.8
XRN2Q9H0D6 SH3TC1-208ENST00000504223 698 ntTSL 321.45■■□□□ 1.023e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-210ENST00000497674 563 ntTSL 221.41■■□□□ 1.023e-6■■■■□ 19.8
XRN2Q9H0D6 GORASP2-204ENST00000454751 624 ntTSL 521.41■■□□□ 1.023e-6■■■■□ 19.8
XRN2Q9H0D6 TBPL1-203ENST00000367871 808 ntTSL 2 BASIC21.2■□□□□ 0.983e-6■■■■□ 19.8
XRN2Q9H0D6 TBPL1-202ENST00000367869 623 ntTSL 321.15■□□□□ 0.983e-6■■■■□ 19.8
XRN2Q9H0D6 C1orf35-203ENST00000469781 2256 ntTSL 221.12■□□□□ 0.973e-6■■■■□ 19.8
XRN2Q9H0D6 CDIP1-212ENST00000588381 484 ntTSL 321.11■□□□□ 0.973e-6■■■■□ 19.8
XRN2Q9H0D6 KCNQ1-202ENST00000335475 2159 ntAPPRIS ALT2 TSL 1 (best) BASIC20.92■□□□□ 0.943e-6■■■■□ 19.8
XRN2Q9H0D6 DENND4B-201ENST00000361217 5706 ntAPPRIS P2 TSL 1 (best) BASIC20.74■□□□□ 0.912e-9■■■■□ 19.8
XRN2Q9H0D6 VAC14-205ENST00000564512 515 ntTSL 1 (best)20.7■□□□□ 0.93e-6■■■■□ 19.8
XRN2Q9H0D6 NOP2-214ENST00000542867 848 ntTSL 520.68■□□□□ 0.93e-6■■■■□ 19.8
XRN2Q9H0D6 MRPS34-201ENST00000177742 1040 ntTSL 1 (best) BASIC20.64■□□□□ 0.893e-6■■■■□ 19.8
XRN2Q9H0D6 VAC14-209ENST00000567648 702 ntTSL 320.63■□□□□ 0.893e-6■■■■□ 19.8
XRN2Q9H0D6 NR2F1-205ENST00000615873 1427 ntTSL 1 (best) BASIC20.6■□□□□ 0.893e-6■■■■□ 19.8
Retrieved 100 of 21,068 protein–RNA pairs in 111 ms