RNA–Protein interactions for RNA: ENST00000567648.1

VAC14-209, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 702 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-209ENST00000567648 NISCHQ9Y2I1 1504 aa42.88■■■■■ 4.46
VAC14-209ENST00000567648 CCDC180Q9P1Z9 1646 aa38.4■■■■□ 3.74
VAC14-209ENST00000567648 ABCC9O60706 1549 aa38.26■■■■□ 3.72
VAC14-209ENST00000567648 RB1CC1Q8TDY2 1594 aa36.38■■■■□ 3.41
VAC14-209ENST00000567648 NACADO15069 1562 aa36.16■■■■□ 3.38
VAC14-209ENST00000567648 DCAF8L2P0C7V8 631 aa35.98■■■■□ 3.35
VAC14-209ENST00000567648 UNC13AQ9UPW8 1703 aa35.88■■■■□ 3.33
VAC14-209ENST00000567648 DNAJC5BQ9UF47 199 aa35.76■■■■□ 3.32
VAC14-209ENST00000567648 MYO15BQ96JP2 1530 aa35.67■■■■□ 3.3
VAC14-209ENST00000567648 ZCCHC6Q5VYS8 1495 aaKnown RBP35.63■■■■□ 3.29
VAC14-209ENST00000567648 PABPN1Q86U42 306 aaKnown RBP eCLIP35.61■■■■□ 3.29
VAC14-209ENST00000567648 BICRAQ9NZM4 1560 aa35.52■■■■□ 3.28
VAC14-209ENST00000567648 DCAF1Q9Y4B6 1507 aa35.34■■■■□ 3.25
VAC14-209ENST00000567648 SCRIBQ14160 1630 aa35.13■■■■□ 3.21
VAC14-209ENST00000567648 SHROOM4Q9ULL8 1493 aa34.74■■■■□ 3.15
VAC14-209ENST00000567648 CC2D2AQ9P2K1 1620 aa34.59■■■■□ 3.13
VAC14-209ENST00000567648 EIF4G1Q04637 1599 aaKnown RBP34.53■■■■□ 3.12
VAC14-209ENST00000567648 CECR2Q9BXF3 1484 aa34.36■■■■□ 3.09
VAC14-209ENST00000567648 SMARCA4P51532 1647 aa33.47■■■□□ 2.95
VAC14-209ENST00000567648 ATAD2BQ9ULI0 1458 aa33.38■■■□□ 2.93
VAC14-209ENST00000567648 NCAPD3P42695 1498 aa33.37■■■□□ 2.93
VAC14-209ENST00000567648 SMARCA2P51531 1590 aa33.22■■■□□ 2.91
VAC14-209ENST00000567648 BAZ1AQ9NRL2 1556 aaPredicted RBP33.22■■■□□ 2.91
VAC14-209ENST00000567648 HMGXB3Q12766 1538 aa33.21■■■□□ 2.91
VAC14-209ENST00000567648 MROH2BQ7Z745 1585 aa33.15■■■□□ 2.9
VAC14-209ENST00000567648 PEG3Q9GZU2 1588 aa33.09■■■□□ 2.89
VAC14-209ENST00000567648 BAZ1BQ9UIG0 1483 aaKnown RBP33.04■■■□□ 2.88
VAC14-209ENST00000567648 NESP48681 1621 aa33■■■□□ 2.87
VAC14-209ENST00000567648 ERCC6Q03468 1493 aa32.87■■■□□ 2.85
VAC14-209ENST00000567648 WIZO95785 1651 aa32.81■■■□□ 2.84
VAC14-209ENST00000567648 CUX2O14529 1486 aa32.73■■■□□ 2.83
VAC14-209ENST00000567648 THOC2Q8NI27 1593 aaKnown RBP32.63■■■□□ 2.81
VAC14-209ENST00000567648 KIF21AQ7Z4S6 1674 aa32.62■■■□□ 2.81
VAC14-209ENST00000567648 LAMC3Q9Y6N6 1575 aa32.62■■■□□ 2.81
VAC14-209ENST00000567648 DNAJC5Q9H3Z4 198 aa32.46■■■□□ 2.79
VAC14-209ENST00000567648 RSF1Q96T23 1441 aaPredicted RBP32.44■■■□□ 2.78
VAC14-209ENST00000567648 CADPSQ9ULU8 1353 aa32.36■■■□□ 2.77
VAC14-209ENST00000567648 PDS5BQ9NTI5 1447 aa32.31■■■□□ 2.76
VAC14-209ENST00000567648 TOP2AP11388 1531 aaKnown RBP32.28■■■□□ 2.76
VAC14-209ENST00000567648 MRC2Q9UBG0 1479 aa32.15■■■□□ 2.74
VAC14-209ENST00000567648 WDR62O43379 1518 aa32.13■■■□□ 2.73
VAC14-209ENST00000567648 CFTRP13569 1480 aa32.1■■■□□ 2.73
VAC14-209ENST00000567648 FANCD2Q9BXW9 1451 aa32.06■■■□□ 2.72
VAC14-209ENST00000567648 CEP164Q9UPV0 1460 aa32.05■■■□□ 2.72
VAC14-209ENST00000567648 PRDM2Q13029 1718 aa31.94■■■□□ 2.7
VAC14-209ENST00000567648 CCDC88BA6NC98 1476 aa31.91■■■□□ 2.7
VAC14-209ENST00000567648 URB2Q14146 1524 aaKnown RBP31.89■■■□□ 2.7
VAC14-209ENST00000567648 TOPBP1Q92547 1522 aa31.52■■■□□ 2.64
VAC14-209ENST00000567648 ZNF608Q9ULD9 1512 aaPredicted RBP31.49■■■□□ 2.63
VAC14-209ENST00000567648 DNMBPQ6XZF7 1577 aa31.41■■■□□ 2.62
VAC14-209ENST00000567648 IFT140Q96RY7 1462 aa31.36■■■□□ 2.61
VAC14-209ENST00000567648 EIF4G3O43432 1585 aaKnown RBP31.32■■■□□ 2.6
VAC14-209ENST00000567648 TARBP1Q13395 1621 aaKnown RBP31.29■■■□□ 2.6
VAC14-209ENST00000567648 ABCC8Q09428 1581 aa31.24■■■□□ 2.59
VAC14-209ENST00000567648 POLA1P09884 1462 aaPredicted RBP31.22■■■□□ 2.59
VAC14-209ENST00000567648 TRIM41Q8WV44 630 aa31.19■■■□□ 2.58
VAC14-209ENST00000567648 OSCARQ8IYS5 282 aa31.16■■■□□ 2.58
VAC14-209ENST00000567648 RAD54L2Q9Y4B4 1467 aa31.15■■■□□ 2.58
VAC14-209ENST00000567648 AQRO60306 1485 aaKnown RBP eCLIP31.14■■■□□ 2.58
VAC14-209ENST00000567648 CUX1P39880 1505 aa31.13■■■□□ 2.57
VAC14-209ENST00000567648 CHD1O14646 1710 aa31.1■■■□□ 2.57
VAC14-209ENST00000567648 SUPT5HO00267 1087 aaKnown RBP31.1■■■□□ 2.57
VAC14-209ENST00000567648 FGD5Q6ZNL6 1462 aa31.06■■■□□ 2.56
VAC14-209ENST00000567648 RIMBP3CA6NJZ7 1639 aa31.02■■■□□ 2.56
VAC14-209ENST00000567648 RIMBP3BA6NNM3 1639 aa31.02■■■□□ 2.56
VAC14-209ENST00000567648 RIMBP3Q9UFD9 1639 aa31.02■■■□□ 2.56
VAC14-209ENST00000567648 SOGA1O94964 1423 aa30.97■■■□□ 2.55
VAC14-209ENST00000567648 WDR97A6NE52 1622 aa30.96■■■□□ 2.55
VAC14-209ENST00000567648 TDRD9Q8NDG6 1382 aaKnown RBP30.95■■■□□ 2.55
VAC14-209ENST00000567648 ARHGEF11O15085 1522 aa30.89■■■□□ 2.54
VAC14-209ENST00000567648 SNAPC4Q5SXM2 1469 aa30.85■■■□□ 2.53
VAC14-209ENST00000567648 PBRM1Q86U86 1689 aa30.78■■■□□ 2.52
VAC14-209ENST00000567648 FBLN2P98095 1184 aa30.76■■■□□ 2.51
VAC14-209ENST00000567648 ABCA5Q8WWZ7 1642 aa30.71■■■□□ 2.51
VAC14-209ENST00000567648 SYNJ1O43426 1573 aa30.7■■■□□ 2.5
VAC14-209ENST00000567648 GRIN2BQ13224 1484 aa30.68■■■□□ 2.5
VAC14-209ENST00000567648 CLASP1Q7Z460 1538 aa30.67■■■□□ 2.5
VAC14-209ENST00000567648 ABCA10Q8WWZ4 1543 aa30.67■■■□□ 2.5
VAC14-209ENST00000567648 BIVM-ERCC5R4GMW8 1640 aa30.66■■■□□ 2.5
VAC14-209ENST00000567648 MAGI1Q96QZ7 1491 aaPredicted RBP30.66■■■□□ 2.5
VAC14-209ENST00000567648 ARAP1Q96P48 1450 aa30.65■■■□□ 2.5
VAC14-209ENST00000567648 GAPVD1Q14C86 1478 aa30.63■■■□□ 2.49
VAC14-209ENST00000567648 TOP2BQ02880 1626 aa30.62■■■□□ 2.49
VAC14-209ENST00000567648 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
VAC14-209ENST00000567648 WRNQ14191 1432 aaPredicted RBP eCLIP30.54■■■□□ 2.48
VAC14-209ENST00000567648 CYB5RLQ6IPT4 315 aa30.52■■■□□ 2.48
VAC14-209ENST00000567648 CHMP7Q8WUX9 453 aaPredicted RBP30.51■■■□□ 2.47
VAC14-209ENST00000567648 ADAMTS12P58397 1594 aa30.46■■■□□ 2.47
VAC14-209ENST00000567648 CEP170Q5SW79 1584 aa30.36■■■□□ 2.45
VAC14-209ENST00000567648 GRIN2AQ12879 1464 aa30.35■■■□□ 2.45
VAC14-209ENST00000567648 ERCC6L2Q5T890 1561 aa30.33■■■□□ 2.45
VAC14-209ENST00000567648 ERICH3Q5RHP9 1530 aa30.25■■■□□ 2.43
VAC14-209ENST00000567648 NUP160Q12769 1436 aa30.24■■■□□ 2.43
VAC14-209ENST00000567648 FHAD1B1AJZ9 1412 aa30.21■■■□□ 2.43
VAC14-209ENST00000567648 SHROOM2Q13796 1616 aa30.17■■■□□ 2.42
VAC14-209ENST00000567648 TRHP20396 242 aaPredicted RBP30.06■■■□□ 2.4
VAC14-209ENST00000567648 RUSC2Q8N2Y8 1516 aa30.04■■■□□ 2.4
VAC14-209ENST00000567648 IGF1RP08069 1367 aa29.91■■■□□ 2.38
VAC14-209ENST00000567648 PRG4Q92954 1404 aaPredicted RBP29.89■■■□□ 2.38
VAC14-209ENST00000567648 CUL7Q14999 1698 aa29.88■■■□□ 2.37
Retrieved 100 of 20,778 RNA–protein pairs in 14 ms