RNA–Protein interactions for RNA: ENST00000588381.1

CDIP1-212, Transcript of cell death inducing p53 target 1, humanhuman

TSL 3

Gene CDIP1, Length 484 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDIP1-212ENST00000588381 NISCHQ9Y2I1 1504 aa43.56■■■■■ 4.56
CDIP1-212ENST00000588381 CCDC180Q9P1Z9 1646 aa38.92■■■■□ 3.82
CDIP1-212ENST00000588381 ABCC9O60706 1549 aa38.61■■■■□ 3.77
CDIP1-212ENST00000588381 RB1CC1Q8TDY2 1594 aa36.95■■■■□ 3.51
CDIP1-212ENST00000588381 NACADO15069 1562 aa36.8■■■■□ 3.48
CDIP1-212ENST00000588381 DCAF8L2P0C7V8 631 aa36.63■■■■□ 3.45
CDIP1-212ENST00000588381 MYO15BQ96JP2 1530 aa36.46■■■■□ 3.43
CDIP1-212ENST00000588381 ZCCHC6Q5VYS8 1495 aaKnown RBP36.14■■■■□ 3.38
CDIP1-212ENST00000588381 DCAF1Q9Y4B6 1507 aa36.07■■■■□ 3.36
CDIP1-212ENST00000588381 PABPN1Q86U42 306 aaKnown RBP eCLIP36.03■■■■□ 3.36
CDIP1-212ENST00000588381 DNAJC5BQ9UF47 199 aa36.02■■■■□ 3.36
CDIP1-212ENST00000588381 UNC13AQ9UPW8 1703 aa35.98■■■■□ 3.35
CDIP1-212ENST00000588381 BICRAQ9NZM4 1560 aa35.81■■■■□ 3.32
CDIP1-212ENST00000588381 SHROOM4Q9ULL8 1493 aa35.49■■■■□ 3.27
CDIP1-212ENST00000588381 SCRIBQ14160 1630 aa35.39■■■■□ 3.26
CDIP1-212ENST00000588381 EIF4G1Q04637 1599 aaKnown RBP34.92■■■■□ 3.18
CDIP1-212ENST00000588381 CC2D2AQ9P2K1 1620 aa34.91■■■■□ 3.18
CDIP1-212ENST00000588381 CECR2Q9BXF3 1484 aa34.8■■■■□ 3.16
CDIP1-212ENST00000588381 NCAPD3P42695 1498 aa34.01■■■■□ 3.03
CDIP1-212ENST00000588381 ATAD2BQ9ULI0 1458 aa33.89■■■■□ 3.02
CDIP1-212ENST00000588381 SMARCA4P51532 1647 aa33.86■■■■□ 3.01
CDIP1-212ENST00000588381 SMARCA2P51531 1590 aa33.81■■■■□ 3
CDIP1-212ENST00000588381 BAZ1AQ9NRL2 1556 aaPredicted RBP33.8■■■■□ 3
CDIP1-212ENST00000588381 HMGXB3Q12766 1538 aa33.72■■■□□ 2.99
CDIP1-212ENST00000588381 PEG3Q9GZU2 1588 aa33.61■■■□□ 2.97
CDIP1-212ENST00000588381 BAZ1BQ9UIG0 1483 aaKnown RBP33.55■■■□□ 2.96
CDIP1-212ENST00000588381 MROH2BQ7Z745 1585 aa33.52■■■□□ 2.96
CDIP1-212ENST00000588381 ERCC6Q03468 1493 aa33.35■■■□□ 2.93
CDIP1-212ENST00000588381 CUX2O14529 1486 aa33.25■■■□□ 2.91
CDIP1-212ENST00000588381 NESP48681 1621 aa33.24■■■□□ 2.91
CDIP1-212ENST00000588381 LAMC3Q9Y6N6 1575 aa33.14■■■□□ 2.9
CDIP1-212ENST00000588381 WIZO95785 1651 aa33.09■■■□□ 2.89
CDIP1-212ENST00000588381 RSF1Q96T23 1441 aaPredicted RBP32.99■■■□□ 2.87
CDIP1-212ENST00000588381 PDS5BQ9NTI5 1447 aa32.99■■■□□ 2.87
CDIP1-212ENST00000588381 CADPSQ9ULU8 1353 aa32.97■■■□□ 2.87
CDIP1-212ENST00000588381 DNAJC5Q9H3Z4 198 aa32.95■■■□□ 2.87
CDIP1-212ENST00000588381 THOC2Q8NI27 1593 aaKnown RBP32.83■■■□□ 2.85
CDIP1-212ENST00000588381 KIF21AQ7Z4S6 1674 aa32.78■■■□□ 2.84
CDIP1-212ENST00000588381 TOP2AP11388 1531 aaKnown RBP32.74■■■□□ 2.83
CDIP1-212ENST00000588381 CFTRP13569 1480 aa32.65■■■□□ 2.82
CDIP1-212ENST00000588381 MRC2Q9UBG0 1479 aa32.61■■■□□ 2.81
CDIP1-212ENST00000588381 CEP164Q9UPV0 1460 aa32.54■■■□□ 2.8
CDIP1-212ENST00000588381 FANCD2Q9BXW9 1451 aa32.54■■■□□ 2.8
CDIP1-212ENST00000588381 WDR62O43379 1518 aa32.52■■■□□ 2.8
CDIP1-212ENST00000588381 CCDC88BA6NC98 1476 aa32.4■■■□□ 2.78
CDIP1-212ENST00000588381 URB2Q14146 1524 aaKnown RBP32.22■■■□□ 2.75
CDIP1-212ENST00000588381 PRDM2Q13029 1718 aa32.21■■■□□ 2.75
CDIP1-212ENST00000588381 ABCC8Q09428 1581 aa32■■■□□ 2.71
CDIP1-212ENST00000588381 TOPBP1Q92547 1522 aa31.95■■■□□ 2.7
CDIP1-212ENST00000588381 IFT140Q96RY7 1462 aa31.91■■■□□ 2.7
CDIP1-212ENST00000588381 DNMBPQ6XZF7 1577 aa31.85■■■□□ 2.69
CDIP1-212ENST00000588381 OSCARQ8IYS5 282 aa31.84■■■□□ 2.69
CDIP1-212ENST00000588381 ZNF608Q9ULD9 1512 aaPredicted RBP31.76■■■□□ 2.68
CDIP1-212ENST00000588381 SUPT5HO00267 1087 aaKnown RBP31.7■■■□□ 2.67
CDIP1-212ENST00000588381 POLA1P09884 1462 aaPredicted RBP31.64■■■□□ 2.66
CDIP1-212ENST00000588381 TARBP1Q13395 1621 aaKnown RBP31.62■■■□□ 2.65
CDIP1-212ENST00000588381 EIF4G3O43432 1585 aaKnown RBP31.57■■■□□ 2.64
CDIP1-212ENST00000588381 SOGA1O94964 1423 aa31.55■■■□□ 2.64
CDIP1-212ENST00000588381 AQRO60306 1485 aaKnown RBP eCLIP31.54■■■□□ 2.64
CDIP1-212ENST00000588381 TRIM41Q8WV44 630 aa31.5■■■□□ 2.63
CDIP1-212ENST00000588381 RAD54L2Q9Y4B4 1467 aa31.48■■■□□ 2.63
CDIP1-212ENST00000588381 CUX1P39880 1505 aa31.48■■■□□ 2.63
CDIP1-212ENST00000588381 FGD5Q6ZNL6 1462 aa31.46■■■□□ 2.63
CDIP1-212ENST00000588381 TDRD9Q8NDG6 1382 aaKnown RBP31.41■■■□□ 2.62
CDIP1-212ENST00000588381 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
CDIP1-212ENST00000588381 FBLN2P98095 1184 aa31.29■■■□□ 2.6
CDIP1-212ENST00000588381 CHD1O14646 1710 aa31.24■■■□□ 2.59
CDIP1-212ENST00000588381 RIMBP3CA6NJZ7 1639 aa31.24■■■□□ 2.59
CDIP1-212ENST00000588381 RIMBP3BA6NNM3 1639 aa31.24■■■□□ 2.59
CDIP1-212ENST00000588381 RIMBP3Q9UFD9 1639 aa31.24■■■□□ 2.59
CDIP1-212ENST00000588381 GRIN2BQ13224 1484 aa31.22■■■□□ 2.59
CDIP1-212ENST00000588381 ARHGEF11O15085 1522 aa31.21■■■□□ 2.59
CDIP1-212ENST00000588381 SNAPC4Q5SXM2 1469 aa31.21■■■□□ 2.59
CDIP1-212ENST00000588381 MAGI1Q96QZ7 1491 aaPredicted RBP31.21■■■□□ 2.59
CDIP1-212ENST00000588381 ABCA10Q8WWZ4 1543 aa31.18■■■□□ 2.58
CDIP1-212ENST00000588381 CHMP7Q8WUX9 453 aaPredicted RBP31.17■■■□□ 2.58
CDIP1-212ENST00000588381 GAPVD1Q14C86 1478 aa31.15■■■□□ 2.58
CDIP1-212ENST00000588381 WRNQ14191 1432 aaPredicted RBP eCLIP31.13■■■□□ 2.57
CDIP1-212ENST00000588381 SYNJ2O15056 1496 aa31.09■■■□□ 2.57
CDIP1-212ENST00000588381 TOP2BQ02880 1626 aa31.07■■■□□ 2.56
CDIP1-212ENST00000588381 BIVM-ERCC5R4GMW8 1640 aa31.04■■■□□ 2.56
CDIP1-212ENST00000588381 ABCA5Q8WWZ7 1642 aa31.03■■■□□ 2.56
CDIP1-212ENST00000588381 CYB5RLQ6IPT4 315 aa31.02■■■□□ 2.56
CDIP1-212ENST00000588381 SYNJ1O43426 1573 aa31■■■□□ 2.55
CDIP1-212ENST00000588381 PBRM1Q86U86 1689 aa31■■■□□ 2.55
CDIP1-212ENST00000588381 CLASP1Q7Z460 1538 aa30.98■■■□□ 2.55
CDIP1-212ENST00000588381 ARAP1Q96P48 1450 aa30.9■■■□□ 2.54
CDIP1-212ENST00000588381 GRIN2AQ12879 1464 aa30.8■■■□□ 2.52
CDIP1-212ENST00000588381 ERICH3Q5RHP9 1530 aa30.79■■■□□ 2.52
CDIP1-212ENST00000588381 FHAD1B1AJZ9 1412 aa30.79■■■□□ 2.52
CDIP1-212ENST00000588381 ADAMTS12P58397 1594 aa30.76■■■□□ 2.52
CDIP1-212ENST00000588381 NUP160Q12769 1436 aa30.72■■■□□ 2.51
CDIP1-212ENST00000588381 CEP170Q5SW79 1584 aa30.62■■■□□ 2.49
CDIP1-212ENST00000588381 TRHP20396 242 aaPredicted RBP30.55■■■□□ 2.48
CDIP1-212ENST00000588381 KIF27Q86VH2 1401 aa30.53■■■□□ 2.48
CDIP1-212ENST00000588381 IGF1RP08069 1367 aa30.51■■■□□ 2.47
CDIP1-212ENST00000588381 SHROOM2Q13796 1616 aa30.5■■■□□ 2.47
CDIP1-212ENST00000588381 JPH4Q96JJ6 628 aa30.46■■■□□ 2.47
CDIP1-212ENST00000588381 ERCC6L2Q5T890 1561 aa30.45■■■□□ 2.47
CDIP1-212ENST00000588381 PRG4Q92954 1404 aaPredicted RBP30.38■■■□□ 2.45
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms