RNA–Protein interactions for RNA: ENST00000564512.1

VAC14-205, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 1 (best)

Gene VAC14, Length 515 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-205ENST00000564512 NISCHQ9Y2I1 1504 aa43.89■■■■■ 4.62
VAC14-205ENST00000564512 CCDC180Q9P1Z9 1646 aa38.92■■■■□ 3.82
VAC14-205ENST00000564512 ABCC9O60706 1549 aa37.08■■■■□ 3.53
VAC14-205ENST00000564512 ZCCHC6Q5VYS8 1495 aaKnown RBP36.76■■■■□ 3.48
VAC14-205ENST00000564512 DCAF1Q9Y4B6 1507 aa36.45■■■■□ 3.43
VAC14-205ENST00000564512 MYO15BQ96JP2 1530 aa36.35■■■■□ 3.41
VAC14-205ENST00000564512 NACADO15069 1562 aa36.27■■■■□ 3.4
VAC14-205ENST00000564512 RB1CC1Q8TDY2 1594 aa36.14■■■■□ 3.38
VAC14-205ENST00000564512 DCAF8L2P0C7V8 631 aa35.94■■■■□ 3.34
VAC14-205ENST00000564512 UNC13AQ9UPW8 1703 aa35.52■■■■□ 3.28
VAC14-205ENST00000564512 SCRIBQ14160 1630 aa35.38■■■■□ 3.25
VAC14-205ENST00000564512 BICRAQ9NZM4 1560 aa35.06■■■■□ 3.2
VAC14-205ENST00000564512 SHROOM4Q9ULL8 1493 aa34.82■■■■□ 3.16
VAC14-205ENST00000564512 PABPN1Q86U42 306 aaKnown RBP eCLIP34.6■■■■□ 3.13
VAC14-205ENST00000564512 EIF4G1Q04637 1599 aaKnown RBP34.03■■■■□ 3.04
VAC14-205ENST00000564512 CECR2Q9BXF3 1484 aa34.03■■■■□ 3.04
VAC14-205ENST00000564512 BAZ1AQ9NRL2 1556 aaPredicted RBP33.99■■■■□ 3.03
VAC14-205ENST00000564512 SMARCA4P51532 1647 aa33.97■■■■□ 3.03
VAC14-205ENST00000564512 MROH2BQ7Z745 1585 aa33.81■■■■□ 3
VAC14-205ENST00000564512 CC2D2AQ9P2K1 1620 aa33.71■■■□□ 2.99
VAC14-205ENST00000564512 PEG3Q9GZU2 1588 aa33.69■■■□□ 2.98
VAC14-205ENST00000564512 RSF1Q96T23 1441 aaPredicted RBP33.62■■■□□ 2.97
VAC14-205ENST00000564512 SMARCA2P51531 1590 aa33.55■■■□□ 2.96
VAC14-205ENST00000564512 WIZO95785 1651 aa33.54■■■□□ 2.96
VAC14-205ENST00000564512 ATAD2BQ9ULI0 1458 aa33.5■■■□□ 2.95
VAC14-205ENST00000564512 HMGXB3Q12766 1538 aa33.41■■■□□ 2.94
VAC14-205ENST00000564512 NCAPD3P42695 1498 aa33.38■■■□□ 2.93
VAC14-205ENST00000564512 DNAJC5BQ9UF47 199 aa33.28■■■□□ 2.92
VAC14-205ENST00000564512 BAZ1BQ9UIG0 1483 aaKnown RBP33.25■■■□□ 2.91
VAC14-205ENST00000564512 TOP2AP11388 1531 aaKnown RBP33.24■■■□□ 2.91
VAC14-205ENST00000564512 SUPT5HO00267 1087 aaKnown RBP33.03■■■□□ 2.88
VAC14-205ENST00000564512 CCDC88BA6NC98 1476 aa32.73■■■□□ 2.83
VAC14-205ENST00000564512 PRDM2Q13029 1718 aa32.54■■■□□ 2.8
VAC14-205ENST00000564512 LAMC3Q9Y6N6 1575 aa32.49■■■□□ 2.79
VAC14-205ENST00000564512 CFTRP13569 1480 aa32.42■■■□□ 2.78
VAC14-205ENST00000564512 CADPSQ9ULU8 1353 aa32.37■■■□□ 2.77
VAC14-205ENST00000564512 NESP48681 1621 aa32.33■■■□□ 2.77
VAC14-205ENST00000564512 KIF21AQ7Z4S6 1674 aa32.16■■■□□ 2.74
VAC14-205ENST00000564512 PDS5BQ9NTI5 1447 aa32.09■■■□□ 2.73
VAC14-205ENST00000564512 FANCD2Q9BXW9 1451 aa32.05■■■□□ 2.72
VAC14-205ENST00000564512 CEP164Q9UPV0 1460 aa31.97■■■□□ 2.71
VAC14-205ENST00000564512 THOC2Q8NI27 1593 aaKnown RBP31.89■■■□□ 2.7
VAC14-205ENST00000564512 ERCC6Q03468 1493 aa31.88■■■□□ 2.69
VAC14-205ENST00000564512 MRC2Q9UBG0 1479 aa31.79■■■□□ 2.68
VAC14-205ENST00000564512 ABCC8Q09428 1581 aa31.78■■■□□ 2.68
VAC14-205ENST00000564512 DNMBPQ6XZF7 1577 aa31.75■■■□□ 2.67
VAC14-205ENST00000564512 WDR62O43379 1518 aa31.75■■■□□ 2.67
VAC14-205ENST00000564512 BIVM-ERCC5R4GMW8 1640 aa31.74■■■□□ 2.67
VAC14-205ENST00000564512 URB2Q14146 1524 aaKnown RBP31.73■■■□□ 2.67
VAC14-205ENST00000564512 CUX1P39880 1505 aa31.7■■■□□ 2.66
VAC14-205ENST00000564512 SYNJ1O43426 1573 aa31.68■■■□□ 2.66
VAC14-205ENST00000564512 TOP2BQ02880 1626 aa31.67■■■□□ 2.66
VAC14-205ENST00000564512 WRNQ14191 1432 aaPredicted RBP eCLIP31.67■■■□□ 2.66
VAC14-205ENST00000564512 TOPBP1Q92547 1522 aa31.66■■■□□ 2.66
VAC14-205ENST00000564512 FGD5Q6ZNL6 1462 aa31.45■■■□□ 2.62
VAC14-205ENST00000564512 POLA1P09884 1462 aaPredicted RBP31.43■■■□□ 2.62
VAC14-205ENST00000564512 CUX2O14529 1486 aa31.42■■■□□ 2.62
VAC14-205ENST00000564512 WDR97A6NE52 1622 aa31.39■■■□□ 2.62
VAC14-205ENST00000564512 TARBP1Q13395 1621 aaKnown RBP31.35■■■□□ 2.61
VAC14-205ENST00000564512 CHIC1Q5VXU3 224 aa31.33■■■□□ 2.61
VAC14-205ENST00000564512 IFT140Q96RY7 1462 aa31.27■■■□□ 2.6
VAC14-205ENST00000564512 ABCA10Q8WWZ4 1543 aa31.21■■■□□ 2.59
VAC14-205ENST00000564512 RAD54L2Q9Y4B4 1467 aa31.21■■■□□ 2.59
VAC14-205ENST00000564512 TRIM41Q8WV44 630 aa31.2■■■□□ 2.59
VAC14-205ENST00000564512 SOGA1O94964 1423 aa31.2■■■□□ 2.59
VAC14-205ENST00000564512 ABCA5Q8WWZ7 1642 aa31.14■■■□□ 2.58
VAC14-205ENST00000564512 EIF4G3O43432 1585 aaKnown RBP31.09■■■□□ 2.57
VAC14-205ENST00000564512 ZNF608Q9ULD9 1512 aaPredicted RBP31.03■■■□□ 2.56
VAC14-205ENST00000564512 PBRM1Q86U86 1689 aa31.03■■■□□ 2.56
VAC14-205ENST00000564512 KIF27Q86VH2 1401 aa30.93■■■□□ 2.54
VAC14-205ENST00000564512 GAPVD1Q14C86 1478 aa30.91■■■□□ 2.54
VAC14-205ENST00000564512 TDRD9Q8NDG6 1382 aaKnown RBP30.9■■■□□ 2.54
VAC14-205ENST00000564512 ERICH3Q5RHP9 1530 aa30.88■■■□□ 2.53
VAC14-205ENST00000564512 EEA1Q15075 1411 aa30.88■■■□□ 2.53
VAC14-205ENST00000564512 AQRO60306 1485 aaKnown RBP eCLIP30.88■■■□□ 2.53
VAC14-205ENST00000564512 RUSC2Q8N2Y8 1516 aa30.87■■■□□ 2.53
VAC14-205ENST00000564512 GRIN2BQ13224 1484 aa30.83■■■□□ 2.53
VAC14-205ENST00000564512 CUL7Q14999 1698 aa30.81■■■□□ 2.52
VAC14-205ENST00000564512 ADAMTS12P58397 1594 aa30.76■■■□□ 2.52
VAC14-205ENST00000564512 MAGI1Q96QZ7 1491 aaPredicted RBP30.74■■■□□ 2.51
VAC14-205ENST00000564512 SNAPC4Q5SXM2 1469 aa30.7■■■□□ 2.51
VAC14-205ENST00000564512 IGF1RP08069 1367 aa30.68■■■□□ 2.5
VAC14-205ENST00000564512 KIF21BO75037 1637 aa30.62■■■□□ 2.49
VAC14-205ENST00000564512 CHD1O14646 1710 aa30.61■■■□□ 2.49
VAC14-205ENST00000564512 PRXQ9BXM0 1461 aa30.59■■■□□ 2.49
VAC14-205ENST00000564512 FHAD1B1AJZ9 1412 aa30.59■■■□□ 2.49
VAC14-205ENST00000564512 SYNJ2O15056 1496 aa30.57■■■□□ 2.48
VAC14-205ENST00000564512 CSRNP3Q8WYN3 585 aa30.54■■■□□ 2.48
VAC14-205ENST00000564512 CARMIL1Q5VZK9 1371 aa30.51■■■□□ 2.47
VAC14-205ENST00000564512 RAPGEF2Q9Y4G8 1499 aa30.48■■■□□ 2.47
VAC14-205ENST00000564512 GRIN2AQ12879 1464 aa30.47■■■□□ 2.47
VAC14-205ENST00000564512 FAM9AQ8IZU1 332 aaPredicted RBP30.47■■■□□ 2.47
VAC14-205ENST00000564512 CTTNBP2Q8WZ74 1663 aa30.39■■■□□ 2.46
VAC14-205ENST00000564512 GOLGA3Q08378 1498 aa30.37■■■□□ 2.45
VAC14-205ENST00000564512 CEP170Q5SW79 1584 aa30.35■■■□□ 2.45
VAC14-205ENST00000564512 NUP160Q12769 1436 aa30.32■■■□□ 2.44
VAC14-205ENST00000564512 CHMP7Q8WUX9 453 aaPredicted RBP30.28■■■□□ 2.44
VAC14-205ENST00000564512 CLASP1Q7Z460 1538 aa30.25■■■□□ 2.43
VAC14-205ENST00000564512 FBLN2P98095 1184 aa30.18■■■□□ 2.42
VAC14-205ENST00000564512 IQGAP2Q13576 1575 aa30.17■■■□□ 2.42
Retrieved 100 of 20,778 RNA–protein pairs in 19.4 ms