RNA–Protein interactions for RNA: ENST00000504223.1

SH3TC1-208, Transcript of SH3 domain and tetratricopeptide repeats 1, humanhuman

TSL 3

Gene SH3TC1, Length 698 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3TC1-208ENST00000504223 NISCHQ9Y2I1 1504 aa44.54■■■■■ 4.72
SH3TC1-208ENST00000504223 CCDC180Q9P1Z9 1646 aa39.76■■■■□ 3.96
SH3TC1-208ENST00000504223 ABCC9O60706 1549 aa39.31■■■■□ 3.88
SH3TC1-208ENST00000504223 RB1CC1Q8TDY2 1594 aa37.62■■■■□ 3.61
SH3TC1-208ENST00000504223 NACADO15069 1562 aa37.49■■■■□ 3.59
SH3TC1-208ENST00000504223 DCAF8L2P0C7V8 631 aa37.27■■■■□ 3.56
SH3TC1-208ENST00000504223 MYO15BQ96JP2 1530 aa37.17■■■■□ 3.54
SH3TC1-208ENST00000504223 ZCCHC6Q5VYS8 1495 aaKnown RBP37.03■■■■□ 3.52
SH3TC1-208ENST00000504223 DCAF1Q9Y4B6 1507 aa36.85■■■■□ 3.49
SH3TC1-208ENST00000504223 UNC13AQ9UPW8 1703 aa36.75■■■■□ 3.47
SH3TC1-208ENST00000504223 PABPN1Q86U42 306 aaKnown RBP eCLIP36.66■■■■□ 3.46
SH3TC1-208ENST00000504223 BICRAQ9NZM4 1560 aa36.56■■■■□ 3.44
SH3TC1-208ENST00000504223 DNAJC5BQ9UF47 199 aa36.52■■■■□ 3.44
SH3TC1-208ENST00000504223 SCRIBQ14160 1630 aa36.23■■■■□ 3.39
SH3TC1-208ENST00000504223 SHROOM4Q9ULL8 1493 aa36.13■■■■□ 3.37
SH3TC1-208ENST00000504223 EIF4G1Q04637 1599 aaKnown RBP35.6■■■■□ 3.29
SH3TC1-208ENST00000504223 CC2D2AQ9P2K1 1620 aa35.54■■■■□ 3.28
SH3TC1-208ENST00000504223 CECR2Q9BXF3 1484 aa35.38■■■■□ 3.25
SH3TC1-208ENST00000504223 SMARCA4P51532 1647 aa34.64■■■■□ 3.14
SH3TC1-208ENST00000504223 NCAPD3P42695 1498 aa34.63■■■■□ 3.13
SH3TC1-208ENST00000504223 ATAD2BQ9ULI0 1458 aa34.58■■■■□ 3.13
SH3TC1-208ENST00000504223 BAZ1AQ9NRL2 1556 aaPredicted RBP34.53■■■■□ 3.12
SH3TC1-208ENST00000504223 SMARCA2P51531 1590 aa34.48■■■■□ 3.11
SH3TC1-208ENST00000504223 HMGXB3Q12766 1538 aa34.4■■■■□ 3.1
SH3TC1-208ENST00000504223 PEG3Q9GZU2 1588 aa34.35■■■■□ 3.09
SH3TC1-208ENST00000504223 MROH2BQ7Z745 1585 aa34.32■■■■□ 3.09
SH3TC1-208ENST00000504223 BAZ1BQ9UIG0 1483 aaKnown RBP34.24■■■■□ 3.07
SH3TC1-208ENST00000504223 WIZO95785 1651 aa33.93■■■■□ 3.02
SH3TC1-208ENST00000504223 NESP48681 1621 aa33.92■■■■□ 3.02
SH3TC1-208ENST00000504223 ERCC6Q03468 1493 aa33.88■■■■□ 3.01
SH3TC1-208ENST00000504223 RSF1Q96T23 1441 aaPredicted RBP33.78■■■■□ 3
SH3TC1-208ENST00000504223 LAMC3Q9Y6N6 1575 aa33.75■■■□□ 2.99
SH3TC1-208ENST00000504223 CUX2O14529 1486 aa33.73■■■□□ 2.99
SH3TC1-208ENST00000504223 CADPSQ9ULU8 1353 aa33.58■■■□□ 2.97
SH3TC1-208ENST00000504223 TOP2AP11388 1531 aaKnown RBP33.53■■■□□ 2.96
SH3TC1-208ENST00000504223 PDS5BQ9NTI5 1447 aa33.53■■■□□ 2.96
SH3TC1-208ENST00000504223 THOC2Q8NI27 1593 aaKnown RBP33.51■■■□□ 2.95
SH3TC1-208ENST00000504223 KIF21AQ7Z4S6 1674 aa33.47■■■□□ 2.95
SH3TC1-208ENST00000504223 CFTRP13569 1480 aa33.31■■■□□ 2.92
SH3TC1-208ENST00000504223 MRC2Q9UBG0 1479 aa33.23■■■□□ 2.91
SH3TC1-208ENST00000504223 DNAJC5Q9H3Z4 198 aa33.19■■■□□ 2.9
SH3TC1-208ENST00000504223 FANCD2Q9BXW9 1451 aa33.18■■■□□ 2.9
SH3TC1-208ENST00000504223 CEP164Q9UPV0 1460 aa33.17■■■□□ 2.9
SH3TC1-208ENST00000504223 WDR62O43379 1518 aa33.16■■■□□ 2.9
SH3TC1-208ENST00000504223 CCDC88BA6NC98 1476 aa33.14■■■□□ 2.9
SH3TC1-208ENST00000504223 PRDM2Q13029 1718 aa32.94■■■□□ 2.86
SH3TC1-208ENST00000504223 URB2Q14146 1524 aaKnown RBP32.91■■■□□ 2.86
SH3TC1-208ENST00000504223 SUPT5HO00267 1087 aaKnown RBP32.65■■■□□ 2.82
SH3TC1-208ENST00000504223 TOPBP1Q92547 1522 aa32.61■■■□□ 2.81
SH3TC1-208ENST00000504223 ABCC8Q09428 1581 aa32.55■■■□□ 2.8
SH3TC1-208ENST00000504223 DNMBPQ6XZF7 1577 aa32.53■■■□□ 2.8
SH3TC1-208ENST00000504223 IFT140Q96RY7 1462 aa32.51■■■□□ 2.79
SH3TC1-208ENST00000504223 ZNF608Q9ULD9 1512 aaPredicted RBP32.42■■■□□ 2.78
SH3TC1-208ENST00000504223 POLA1P09884 1462 aaPredicted RBP32.32■■■□□ 2.76
SH3TC1-208ENST00000504223 TARBP1Q13395 1621 aaKnown RBP32.31■■■□□ 2.76
SH3TC1-208ENST00000504223 EIF4G3O43432 1585 aaKnown RBP32.26■■■□□ 2.75
SH3TC1-208ENST00000504223 CUX1P39880 1505 aa32.21■■■□□ 2.75
SH3TC1-208ENST00000504223 OSCARQ8IYS5 282 aa32.21■■■□□ 2.75
SH3TC1-208ENST00000504223 RAD54L2Q9Y4B4 1467 aa32.17■■■□□ 2.74
SH3TC1-208ENST00000504223 AQRO60306 1485 aaKnown RBP eCLIP32.16■■■□□ 2.74
SH3TC1-208ENST00000504223 FGD5Q6ZNL6 1462 aa32.16■■■□□ 2.74
SH3TC1-208ENST00000504223 SOGA1O94964 1423 aa32.15■■■□□ 2.74
SH3TC1-208ENST00000504223 TDRD9Q8NDG6 1382 aaKnown RBP32.03■■■□□ 2.72
SH3TC1-208ENST00000504223 WDR97A6NE52 1622 aa32.01■■■□□ 2.72
SH3TC1-208ENST00000504223 CHD1O14646 1710 aa31.89■■■□□ 2.69
SH3TC1-208ENST00000504223 SNAPC4Q5SXM2 1469 aa31.85■■■□□ 2.69
SH3TC1-208ENST00000504223 TRIM41Q8WV44 630 aa31.85■■■□□ 2.69
SH3TC1-208ENST00000504223 ABCA10Q8WWZ4 1543 aa31.84■■■□□ 2.69
SH3TC1-208ENST00000504223 GRIN2BQ13224 1484 aa31.84■■■□□ 2.69
SH3TC1-208ENST00000504223 SYNJ1O43426 1573 aa31.83■■■□□ 2.69
SH3TC1-208ENST00000504223 WRNQ14191 1432 aaPredicted RBP eCLIP31.83■■■□□ 2.69
SH3TC1-208ENST00000504223 TOP2BQ02880 1626 aa31.82■■■□□ 2.68
SH3TC1-208ENST00000504223 BIVM-ERCC5R4GMW8 1640 aa31.82■■■□□ 2.68
SH3TC1-208ENST00000504223 MAGI1Q96QZ7 1491 aaPredicted RBP31.79■■■□□ 2.68
SH3TC1-208ENST00000504223 FBLN2P98095 1184 aa31.79■■■□□ 2.68
SH3TC1-208ENST00000504223 RIMBP3CA6NJZ7 1639 aa31.78■■■□□ 2.68
SH3TC1-208ENST00000504223 RIMBP3BA6NNM3 1639 aa31.78■■■□□ 2.68
SH3TC1-208ENST00000504223 RIMBP3Q9UFD9 1639 aa31.78■■■□□ 2.68
SH3TC1-208ENST00000504223 GAPVD1Q14C86 1478 aa31.77■■■□□ 2.68
SH3TC1-208ENST00000504223 ABCA5Q8WWZ7 1642 aa31.76■■■□□ 2.67
SH3TC1-208ENST00000504223 ARHGEF11O15085 1522 aa31.74■■■□□ 2.67
SH3TC1-208ENST00000504223 PBRM1Q86U86 1689 aa31.71■■■□□ 2.67
SH3TC1-208ENST00000504223 SYNJ2O15056 1496 aa31.69■■■□□ 2.66
SH3TC1-208ENST00000504223 CHMP7Q8WUX9 453 aaPredicted RBP31.66■■■□□ 2.66
SH3TC1-208ENST00000504223 CLASP1Q7Z460 1538 aa31.61■■■□□ 2.65
SH3TC1-208ENST00000504223 ADAMTS12P58397 1594 aa31.48■■■□□ 2.63
SH3TC1-208ENST00000504223 ARAP1Q96P48 1450 aa31.46■■■□□ 2.63
SH3TC1-208ENST00000504223 ERICH3Q5RHP9 1530 aa31.44■■■□□ 2.62
SH3TC1-208ENST00000504223 GRIN2AQ12879 1464 aa31.43■■■□□ 2.62
SH3TC1-208ENST00000504223 CYB5RLQ6IPT4 315 aa31.42■■■□□ 2.62
SH3TC1-208ENST00000504223 FHAD1B1AJZ9 1412 aa31.4■■■□□ 2.62
SH3TC1-208ENST00000504223 NUP160Q12769 1436 aa31.33■■■□□ 2.61
SH3TC1-208ENST00000504223 CEP170Q5SW79 1584 aa31.3■■■□□ 2.6
SH3TC1-208ENST00000504223 KIF27Q86VH2 1401 aa31.19■■■□□ 2.58
SH3TC1-208ENST00000504223 IGF1RP08069 1367 aa31.15■■■□□ 2.58
SH3TC1-208ENST00000504223 SHROOM2Q13796 1616 aa31.14■■■□□ 2.58
SH3TC1-208ENST00000504223 ERCC6L2Q5T890 1561 aa31.13■■■□□ 2.57
SH3TC1-208ENST00000504223 CUL7Q14999 1698 aa31.05■■■□□ 2.56
SH3TC1-208ENST00000504223 RUSC2Q8N2Y8 1516 aa31.04■■■□□ 2.56
SH3TC1-208ENST00000504223 PRG4Q92954 1404 aaPredicted RBP30.96■■■□□ 2.55
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms