RNA–Protein interactions for RNA: ENST00000587057.5

POLRMT-201, Transcript of RNA polymerase mitochondrial, humanhuman

TSL 5

Gene POLRMT, Length 1,229 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
POLRMT-201ENST00000587057 NISCHQ9Y2I1 1504 aa46.1■■■■■ 4.97
POLRMT-201ENST00000587057 ABCC9O60706 1549 aa42.37■■■■■ 4.37
POLRMT-201ENST00000587057 CCDC180Q9P1Z9 1646 aa41.58■■■■■ 4.25
POLRMT-201ENST00000587057 DNAJC5BQ9UF47 199 aa40.38■■■■■ 4.05
POLRMT-201ENST00000587057 RB1CC1Q8TDY2 1594 aa40.01■■■■□ 3.99
POLRMT-201ENST00000587057 NACADO15069 1562 aa39.55■■■■□ 3.92
POLRMT-201ENST00000587057 PABPN1Q86U42 306 aaKnown RBP eCLIP39.33■■■■□ 3.89
POLRMT-201ENST00000587057 DCAF8L2P0C7V8 631 aa39.2■■■■□ 3.87
POLRMT-201ENST00000587057 UNC13AQ9UPW8 1703 aa38.95■■■■□ 3.83
POLRMT-201ENST00000587057 BICRAQ9NZM4 1560 aa38.78■■■■□ 3.8
POLRMT-201ENST00000587057 MYO15BQ96JP2 1530 aa38.75■■■■□ 3.79
POLRMT-201ENST00000587057 SHROOM4Q9ULL8 1493 aa38.31■■■■□ 3.72
POLRMT-201ENST00000587057 ZCCHC6Q5VYS8 1495 aaKnown RBP38.3■■■■□ 3.72
POLRMT-201ENST00000587057 CECR2Q9BXF3 1484 aa38.28■■■■□ 3.72
POLRMT-201ENST00000587057 CC2D2AQ9P2K1 1620 aa38.21■■■■□ 3.71
POLRMT-201ENST00000587057 DCAF1Q9Y4B6 1507 aa38.1■■■■□ 3.69
POLRMT-201ENST00000587057 EIF4G1Q04637 1599 aaKnown RBP37.95■■■■□ 3.67
POLRMT-201ENST00000587057 SCRIBQ14160 1630 aa37.84■■■■□ 3.65
POLRMT-201ENST00000587057 DNAJC5Q9H3Z4 198 aa37.72■■■■□ 3.63
POLRMT-201ENST00000587057 CUX2O14529 1486 aa36.89■■■■□ 3.5
POLRMT-201ENST00000587057 ERCC6Q03468 1493 aa36.7■■■■□ 3.47
POLRMT-201ENST00000587057 NCAPD3P42695 1498 aa36.51■■■■□ 3.44
POLRMT-201ENST00000587057 ATAD2BQ9ULI0 1458 aa36.28■■■■□ 3.4
POLRMT-201ENST00000587057 HMGXB3Q12766 1538 aa36.17■■■■□ 3.38
POLRMT-201ENST00000587057 SMARCA2P51531 1590 aa36.16■■■■□ 3.38
POLRMT-201ENST00000587057 NESP48681 1621 aa36.13■■■■□ 3.37
POLRMT-201ENST00000587057 SMARCA4P51532 1647 aa36.02■■■■□ 3.36
POLRMT-201ENST00000587057 THOC2Q8NI27 1593 aaKnown RBP35.93■■■■□ 3.34
POLRMT-201ENST00000587057 BAZ1BQ9UIG0 1483 aaKnown RBP35.92■■■■□ 3.34
POLRMT-201ENST00000587057 LAMC3Q9Y6N6 1575 aa35.81■■■■□ 3.32
POLRMT-201ENST00000587057 BAZ1AQ9NRL2 1556 aaPredicted RBP35.79■■■■□ 3.32
POLRMT-201ENST00000587057 TRIM41Q8WV44 630 aa35.77■■■■□ 3.32
POLRMT-201ENST00000587057 PDS5BQ9NTI5 1447 aa35.69■■■■□ 3.3
POLRMT-201ENST00000587057 PEG3Q9GZU2 1588 aa35.68■■■■□ 3.3
POLRMT-201ENST00000587057 KIF21AQ7Z4S6 1674 aa35.61■■■■□ 3.29
POLRMT-201ENST00000587057 MROH2BQ7Z745 1585 aa35.52■■■■□ 3.28
POLRMT-201ENST00000587057 MRC2Q9UBG0 1479 aa35.39■■■■□ 3.26
POLRMT-201ENST00000587057 CADPSQ9ULU8 1353 aa35.38■■■■□ 3.26
POLRMT-201ENST00000587057 WDR62O43379 1518 aa35.31■■■■□ 3.24
POLRMT-201ENST00000587057 WIZO95785 1651 aa35.17■■■■□ 3.22
POLRMT-201ENST00000587057 CEP164Q9UPV0 1460 aa35.1■■■■□ 3.21
POLRMT-201ENST00000587057 OSCARQ8IYS5 282 aa35.08■■■■□ 3.21
POLRMT-201ENST00000587057 FANCD2Q9BXW9 1451 aa34.97■■■■□ 3.19
POLRMT-201ENST00000587057 RSF1Q96T23 1441 aaPredicted RBP34.92■■■■□ 3.18
POLRMT-201ENST00000587057 CFTRP13569 1480 aa34.8■■■■□ 3.16
POLRMT-201ENST00000587057 TOP2AP11388 1531 aaKnown RBP34.74■■■■□ 3.15
POLRMT-201ENST00000587057 URB2Q14146 1524 aaKnown RBP34.7■■■■□ 3.14
POLRMT-201ENST00000587057 RIMBP3CA6NJZ7 1639 aa34.63■■■■□ 3.13
POLRMT-201ENST00000587057 RIMBP3BA6NNM3 1639 aa34.63■■■■□ 3.13
POLRMT-201ENST00000587057 RIMBP3Q9UFD9 1639 aa34.63■■■■□ 3.13
POLRMT-201ENST00000587057 ARHGEF11O15085 1522 aa34.48■■■■□ 3.11
POLRMT-201ENST00000587057 IFT140Q96RY7 1462 aa34.44■■■■□ 3.1
POLRMT-201ENST00000587057 ZNF608Q9ULD9 1512 aaPredicted RBP34.4■■■■□ 3.1
POLRMT-201ENST00000587057 PRDM2Q13029 1718 aa34.31■■■■□ 3.08
POLRMT-201ENST00000587057 CYB5RLQ6IPT4 315 aa34.3■■■■□ 3.08
POLRMT-201ENST00000587057 CCDC88BA6NC98 1476 aa34.3■■■■□ 3.08
POLRMT-201ENST00000587057 TOPBP1Q92547 1522 aa34.2■■■■□ 3.07
POLRMT-201ENST00000587057 TRHP20396 242 aaPredicted RBP34.2■■■■□ 3.07
POLRMT-201ENST00000587057 EIF4G3O43432 1585 aaKnown RBP34.17■■■■□ 3.06
POLRMT-201ENST00000587057 ABCC8Q09428 1581 aa34.13■■■■□ 3.05
POLRMT-201ENST00000587057 ARAP1Q96P48 1450 aa34.07■■■■□ 3.05
POLRMT-201ENST00000587057 DNMBPQ6XZF7 1577 aa34.02■■■■□ 3.04
POLRMT-201ENST00000587057 CHD1O14646 1710 aa34.01■■■■□ 3.04
POLRMT-201ENST00000587057 FBLN2P98095 1184 aa34■■■■□ 3.03
POLRMT-201ENST00000587057 AQRO60306 1485 aaKnown RBP eCLIP34■■■■□ 3.036e-9■■■■□ 20.2
POLRMT-201ENST00000587057 TARBP1Q13395 1621 aaKnown RBP33.92■■■■□ 3.02
POLRMT-201ENST00000587057 AEBP2Q6ZN18 517 aaPredicted RBP33.82■■■■□ 3
POLRMT-201ENST00000587057 POLA1P09884 1462 aaPredicted RBP33.81■■■■□ 3
POLRMT-201ENST00000587057 SUPT5HO00267 1087 aaKnown RBP33.72■■■□□ 2.99
POLRMT-201ENST00000587057 TDRD9Q8NDG6 1382 aaKnown RBP33.68■■■□□ 2.98
POLRMT-201ENST00000587057 RAD54L2Q9Y4B4 1467 aa33.68■■■□□ 2.98
POLRMT-201ENST00000587057 SOGA1O94964 1423 aa33.67■■■□□ 2.98
POLRMT-201ENST00000587057 SNAPC4Q5SXM2 1469 aa33.66■■■□□ 2.98
POLRMT-201ENST00000587057 CLASP1Q7Z460 1538 aa33.66■■■□□ 2.98
POLRMT-201ENST00000587057 CHMP7Q8WUX9 453 aaPredicted RBP33.63■■■□□ 2.97
POLRMT-201ENST00000587057 SYNJ1O43426 1573 aa33.62■■■□□ 2.97
POLRMT-201ENST00000587057 WDR97A6NE52 1622 aa33.6■■■□□ 2.97
POLRMT-201ENST00000587057 MAGI1Q96QZ7 1491 aaPredicted RBP33.56■■■□□ 2.96
POLRMT-201ENST00000587057 FGD5Q6ZNL6 1462 aa33.49■■■□□ 2.95
POLRMT-201ENST00000587057 GRIN2BQ13224 1484 aa33.48■■■□□ 2.95
POLRMT-201ENST00000587057 SYNJ2O15056 1496 aa33.45■■■□□ 2.95
POLRMT-201ENST00000587057 GAPVD1Q14C86 1478 aa33.39■■■□□ 2.94
POLRMT-201ENST00000587057 CUX1P39880 1505 aa33.37■■■□□ 2.93
POLRMT-201ENST00000587057 PBRM1Q86U86 1689 aa33.2■■■□□ 2.91
POLRMT-201ENST00000587057 ABCA10Q8WWZ4 1543 aa33.07■■■□□ 2.89
POLRMT-201ENST00000587057 ABCA5Q8WWZ7 1642 aa33.06■■■□□ 2.88
POLRMT-201ENST00000587057 ERCC6L2Q5T890 1561 aa33.04■■■□□ 2.88
POLRMT-201ENST00000587057 GRIN2AQ12879 1464 aa33.02■■■□□ 2.88
POLRMT-201ENST00000587057 BIVM-ERCC5R4GMW8 1640 aa32.99■■■□□ 2.87
POLRMT-201ENST00000587057 WRNQ14191 1432 aaPredicted RBP eCLIP32.98■■■□□ 2.87
POLRMT-201ENST00000587057 TOP2BQ02880 1626 aa32.98■■■□□ 2.87
POLRMT-201ENST00000587057 CEP170Q5SW79 1584 aa32.96■■■□□ 2.87
POLRMT-201ENST00000587057 NUP160Q12769 1436 aa32.94■■■□□ 2.86
POLRMT-201ENST00000587057 ADAMTS12P58397 1594 aa32.88■■■□□ 2.85
POLRMT-201ENST00000587057 SHROOM2Q13796 1616 aa32.84■■■□□ 2.85
POLRMT-201ENST00000587057 FHAD1B1AJZ9 1412 aa32.81■■■□□ 2.84
POLRMT-201ENST00000587057 KIF13AQ9H1H9 1805 aa32.78■■■□□ 2.84
POLRMT-201ENST00000587057 PRG4Q92954 1404 aaPredicted RBP32.7■■■□□ 2.83
POLRMT-201ENST00000587057 FAM69CQ0P6D2 419 aa32.67■■■□□ 2.82
POLRMT-201ENST00000587057 ERICH3Q5RHP9 1530 aa32.65■■■□□ 2.82
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms