Protein–RNA interactions for Protein: Q96FZ7

CHMP6, Charged multivesicular body protein 6, humanhuman

Predictions only

Length 201 aa.

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Protein RNA Prediction (catRAPID) Interaction (ENCODE eCLIP)
Gene UniProt Accession Transcript Symbol Ensembl Transcript ID Length Transcript Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6Q96FZ7 NRM-203ENST00000376421 1734 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 ZNF843-203ENST00000618063 1765 ntAPPRIS P2 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 CLDND1-203ENST00000394181 2170 ntTSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 RNPS1-202ENST00000320225 2241 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 PMEPA1-202ENST00000341744 4845 ntAPPRIS P1 TSL 1 (best) BASIC19.39■□□□□ 0.69
CHMP6Q96FZ7 AP003071.5-201ENST00000641568 2695 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 ST6GALNAC4-201ENST00000335791 1691 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 EIF2B4-201ENST00000347454 1792 ntAPPRIS P3 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 NF2-203ENST00000353887 1845 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 RTCA-202ENST00000370126 538 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 MADD-208ENST00000405573 1823 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 IGFALS-202ENST00000415638 2136 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 SKP2-208ENST00000546211 1589 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 EARS2-210ENST00000564501 2027 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 HSD17B14-204ENST00000599157 991 ntTSL 3 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 AP001160.3-201ENST00000601484 763 ntBASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 FGF8-207ENST00000618991 856 ntTSL 3 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 ABHD1-207ENST00000621324 1078 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 SLC35A3-213ENST00000638988 1286 ntTSL 5 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 TLNRD1-201ENST00000267984 4845 ntAPPRIS P1 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 SEPT2-245ENST00000616972 3446 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 CNOT6-202ENST00000393356 6303 ntAPPRIS P1 TSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 ADPGK-AS1-201ENST00000563592 2730 ntTSL 2 BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 VHL-202ENST00000345392 2696 ntTSL 1 (best) BASIC19.38■□□□□ 0.69
CHMP6Q96FZ7 CHTOP-204ENST00000368694 2096 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 PLCL2-204ENST00000615277 4147 ntAPPRIS ALT2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 BIRC8-201ENST00000426466 2026 ntAPPRIS P1 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 PRDM11-201ENST00000424263 1858 ntAPPRIS P3 TSL 2 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 RNF157-201ENST00000269391 4955 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 FAM234A-203ENST00000399932 3213 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 SPEG-203ENST00000396688 1457 ntTSL 3 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 SLC39A3-202ENST00000455372 2940 ntTSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 CXorf40A-204ENST00000423421 1403 ntAPPRIS P3 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 AC087633.2-202ENST00000565166 1439 ntBASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 AL645608.1-202ENST00000417705 1389 ntTSL 3 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 TALDO1-201ENST00000319006 1346 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 UCN-201ENST00000296099 795 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 BCKDHB-203ENST00000369760 743 ntTSL 3 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 C19orf12-205ENST00000392278 895 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 AC073343.2-201ENST00000413182 548 ntTSL 4 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 AL031963.3-201ENST00000606441 850 ntBASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 TRAPPC12-201ENST00000324266 2508 ntAPPRIS P2 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 GGNBP2-210ENST00000611219 2315 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 CD177-203ENST00000618265 2222 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 SIM2-201ENST00000290399 4442 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 AGPAT3-201ENST00000291572 5546 ntAPPRIS P1 TSL 1 (best) BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 PHF20L1-209ENST00000395386 6237 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 PRDM8-203ENST00000504452 3706 ntAPPRIS P1 TSL 5 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 MAP3K11-210ENST00000532507 1812 ntTSL 2 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 TCF4-201ENST00000354452 3482 ntAPPRIS ALT1 TSL 5 BASIC19.37■□□□□ 0.69
CHMP6Q96FZ7 ANKRD65-204ENST00000520296 1632 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 N4BP3-201ENST00000274605 6080 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 MEPCE-202ENST00000414441 2261 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 GLIS1-202ENST00000628545 2807 ntAPPRIS ALT2 TSL 5 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 MPP5-201ENST00000261681 5552 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 GBGT1-203ENST00000372040 1980 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 ZNF211-203ENST00000299871 2577 ntAPPRIS ALT2 TSL 3 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 AC118553.2-203ENST00000639037 2590 ntAPPRIS P5 TSL 5 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 ABALON-201ENST00000629058 1903 ntBASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 PRR36-202ENST00000618550 4456 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 LGALS7B-201ENST00000314980 483 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 LARP6-202ENST00000344870 527 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 HTATIP2-208ENST00000532505 595 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 AC007993.2-201ENST00000592842 521 ntTSL 4 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 GFY-201ENST00000576655 1876 ntAPPRIS P1 TSL 5 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 SPTBN4-202ENST00000352632 8676 ntAPPRIS P2 TSL 5 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 MBD1-206ENST00000382948 2434 ntAPPRIS P3 TSL 2 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 LRRC36-201ENST00000329956 2395 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 ITGA7-201ENST00000257879 4120 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 IDH3G-202ENST00000370092 1712 ntTSL 5 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 RPS6KA3-201ENST00000379565 7918 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 PHF1-201ENST00000374512 2224 ntTSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 PLEKHG2-202ENST00000409797 2205 ntAPPRIS ALT2 TSL 2 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 CDKN1B-201ENST00000228872 2657 ntAPPRIS P1 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 NOMO2-212ENST00000622306 4252 ntAPPRIS P3 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 MADCAM1-201ENST00000215637 1572 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 NFKBIZ-201ENST00000326151 2058 ntTSL 2 BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 SMARCC2-201ENST00000267064 4076 ntAPPRIS P4 TSL 1 (best) BASIC19.36■□□□□ 0.69
CHMP6Q96FZ7 KDM1A-201ENST00000356634 3033 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 COL18A1-204ENST00000400337 5436 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 ADRM1-201ENST00000253003 1478 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 SREBF2-201ENST00000361204 5240 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 AC004854.2-201ENST00000608450 1441 ntBASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 ESPN-216ENST00000636330 4731 ntAPPRIS ALT2 TSL 5 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 ING5-201ENST00000313552 5196 ntAPPRIS P3 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 SMG5-201ENST00000361813 4559 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 FN3KRP-201ENST00000269373 1849 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 MRGPRG-AS1-201ENST00000420873 1818 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 CD276-201ENST00000318424 2738 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 PHF12-205ENST00000577226 7679 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 FAIM-202ENST00000360570 1157 ntAPPRIS ALT1 TSL 3 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 NRL-201ENST00000396995 810 ntTSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 AC062017.1-203ENST00000413029 455 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 AC097381.1-201ENST00000429019 1296 ntBASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 MAPKAPK3-201ENST00000357955 2500 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 RAB28-208ENST00000630951 1679 ntTSL 5 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 HOXA9-201ENST00000343483 2060 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 PCCA-202ENST00000376285 2494 ntAPPRIS P1 TSL 1 (best) BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 SYT15-202ENST00000374323 6428 ntTSL 2 BASIC19.35■□□□□ 0.69
CHMP6Q96FZ7 SH2D3C-203ENST00000373277 2750 ntAPPRIS ALT2 TSL 1 (best) BASIC19.35■□□□□ 0.69
Retrieved 100 of 98,524 protein–RNA pairs in 44.3 ms