RNA–Protein interactions for RNA: ENST00000215637.7

MADCAM1-201, Transcript of mucosal vascular addressin cell adhesion molecule 1, humanhuman

APPRIS P4 TSL 1 (best) BASIC

Gene MADCAM1, Length 1,572 nt, Biotype protein coding.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MADCAM1-201ENST00000215637 NISCHQ9Y2I1 1504 aa48.75■■■■■ 5.39
MADCAM1-201ENST00000215637 CCDC180Q9P1Z9 1646 aa43.1■■■■■ 4.49
MADCAM1-201ENST00000215637 ABCC9O60706 1549 aa41.85■■■■■ 4.29
MADCAM1-201ENST00000215637 ZCCHC6Q5VYS8 1495 aaKnown RBP40.76■■■■■ 4.12
MADCAM1-201ENST00000215637 DCAF8L2P0C7V8 631 aa40.61■■■■■ 4.09
MADCAM1-201ENST00000215637 NACADO15069 1562 aa40.4■■■■■ 4.06
MADCAM1-201ENST00000215637 RB1CC1Q8TDY2 1594 aa40.37■■■■■ 4.05
MADCAM1-201ENST00000215637 DCAF1Q9Y4B6 1507 aa40.37■■■■■ 4.05
MADCAM1-201ENST00000215637 MYO15BQ96JP2 1530 aa40.29■■■■■ 4.04
MADCAM1-201ENST00000215637 UNC13AQ9UPW8 1703 aa39.45■■■■□ 3.91
MADCAM1-201ENST00000215637 SCRIBQ14160 1630 aa39.37■■■■□ 3.89
MADCAM1-201ENST00000215637 PABPN1Q86U42 306 aaKnown RBP eCLIP39.21■■■■□ 3.87
MADCAM1-201ENST00000215637 BICRAQ9NZM4 1560 aa39.12■■■■□ 3.85
MADCAM1-201ENST00000215637 SHROOM4Q9ULL8 1493 aa38.86■■■■□ 3.81
MADCAM1-201ENST00000215637 DNAJC5BQ9UF47 199 aa38.1■■■■□ 3.69
MADCAM1-201ENST00000215637 EIF4G1Q04637 1599 aaKnown RBP38.08■■■■□ 3.69
MADCAM1-201ENST00000215637 CECR2Q9BXF3 1484 aa37.91■■■■□ 3.66
MADCAM1-201ENST00000215637 CC2D2AQ9P2K1 1620 aa37.84■■■■□ 3.65
MADCAM1-201ENST00000215637 BAZ1AQ9NRL2 1556 aaPredicted RBP37.73■■■■□ 3.63
MADCAM1-201ENST00000215637 SMARCA4P51532 1647 aa37.72■■■■□ 3.63
MADCAM1-201ENST00000215637 MROH2BQ7Z745 1585 aa37.6■■■■□ 3.61
MADCAM1-201ENST00000215637 RSF1Q96T23 1441 aaPredicted RBP37.37■■■■□ 3.57
MADCAM1-201ENST00000215637 ATAD2BQ9ULI0 1458 aa37.36■■■■□ 3.57
MADCAM1-201ENST00000215637 PEG3Q9GZU2 1588 aa37.34■■■■□ 3.57
MADCAM1-201ENST00000215637 SMARCA2P51531 1590 aa37.33■■■■□ 3.57
MADCAM1-201ENST00000215637 NCAPD3P42695 1498 aa37.28■■■■□ 3.56
MADCAM1-201ENST00000215637 WIZO95785 1651 aa37.24■■■■□ 3.55
MADCAM1-201ENST00000215637 HMGXB3Q12766 1538 aa37.11■■■■□ 3.53
MADCAM1-201ENST00000215637 BAZ1BQ9UIG0 1483 aaKnown RBP37.09■■■■□ 3.53
MADCAM1-201ENST00000215637 TOP2AP11388 1531 aaKnown RBP36.86■■■■□ 3.49
MADCAM1-201ENST00000215637 SUPT5HO00267 1087 aaKnown RBP36.85■■■■□ 3.49
MADCAM1-201ENST00000215637 CCDC88BA6NC98 1476 aa36.41■■■■□ 3.42
MADCAM1-201ENST00000215637 NESP48681 1621 aa36.31■■■■□ 3.4
MADCAM1-201ENST00000215637 LAMC3Q9Y6N6 1575 aa36.24■■■■□ 3.39
MADCAM1-201ENST00000215637 CADPSQ9ULU8 1353 aa36.23■■■■□ 3.39
MADCAM1-201ENST00000215637 CFTRP13569 1480 aa36.07■■■■□ 3.37
MADCAM1-201ENST00000215637 ERCC6Q03468 1493 aa36.05■■■■□ 3.36
MADCAM1-201ENST00000215637 PDS5BQ9NTI5 1447 aa36.01■■■■□ 3.36
MADCAM1-201ENST00000215637 PRDM2Q13029 1718 aa35.93■■■■□ 3.34
MADCAM1-201ENST00000215637 KIF21AQ7Z4S6 1674 aa35.88■■■■□ 3.33
MADCAM1-201ENST00000215637 FANCD2Q9BXW9 1451 aa35.82■■■■□ 3.32
MADCAM1-201ENST00000215637 CEP164Q9UPV0 1460 aa35.74■■■■□ 3.31
MADCAM1-201ENST00000215637 THOC2Q8NI27 1593 aaKnown RBP35.64■■■■□ 3.3
MADCAM1-201ENST00000215637 MRC2Q9UBG0 1479 aa35.6■■■■□ 3.29
MADCAM1-201ENST00000215637 CUX2O14529 1486 aa35.49■■■■□ 3.27
MADCAM1-201ENST00000215637 WDR62O43379 1518 aa35.45■■■■□ 3.27
MADCAM1-201ENST00000215637 URB2Q14146 1524 aaKnown RBP35.43■■■■□ 3.26
MADCAM1-201ENST00000215637 ABCC8Q09428 1581 aa35.31■■■■□ 3.24
MADCAM1-201ENST00000215637 TOPBP1Q92547 1522 aa35.28■■■■□ 3.24
MADCAM1-201ENST00000215637 DNMBPQ6XZF7 1577 aa35.26■■■■□ 3.24
MADCAM1-201ENST00000215637 CUX1P39880 1505 aa35.24■■■■□ 3.23
MADCAM1-201ENST00000215637 WRNQ14191 1432 aaPredicted RBP eCLIP35.21■■■■□ 3.23
MADCAM1-201ENST00000215637 SYNJ1O43426 1573 aa35.15■■■■□ 3.22
MADCAM1-201ENST00000215637 BIVM-ERCC5R4GMW8 1640 aa35.11■■■■□ 3.21
MADCAM1-201ENST00000215637 TOP2BQ02880 1626 aa35.11■■■■□ 3.21
MADCAM1-201ENST00000215637 POLA1P09884 1462 aaPredicted RBP35.01■■■■□ 3.19
MADCAM1-201ENST00000215637 FGD5Q6ZNL6 1462 aa34.99■■■■□ 3.19
MADCAM1-201ENST00000215637 IFT140Q96RY7 1462 aa34.97■■■■□ 3.19
MADCAM1-201ENST00000215637 SOGA1O94964 1423 aa34.9■■■■□ 3.18
MADCAM1-201ENST00000215637 RAD54L2Q9Y4B4 1467 aa34.87■■■■□ 3.17
MADCAM1-201ENST00000215637 TARBP1Q13395 1621 aaKnown RBP34.85■■■■□ 3.17
MADCAM1-201ENST00000215637 ZNF608Q9ULD9 1512 aaPredicted RBP34.8■■■■□ 3.16
MADCAM1-201ENST00000215637 CHIC1Q5VXU3 224 aa34.78■■■■□ 3.16
MADCAM1-201ENST00000215637 TRIM41Q8WV44 630 aa34.76■■■■□ 3.16
MADCAM1-201ENST00000215637 WDR97A6NE52 1622 aa34.74■■■■□ 3.15
MADCAM1-201ENST00000215637 ABCA10Q8WWZ4 1543 aa34.69■■■■□ 3.14
MADCAM1-201ENST00000215637 TDRD9Q8NDG6 1382 aaKnown RBP34.67■■■■□ 3.14
MADCAM1-201ENST00000215637 AQRO60306 1485 aaKnown RBP eCLIP34.66■■■■□ 3.14
MADCAM1-201ENST00000215637 EIF4G3O43432 1585 aaKnown RBP34.65■■■■□ 3.14
MADCAM1-201ENST00000215637 ABCA5Q8WWZ7 1642 aa34.54■■■■□ 3.12
MADCAM1-201ENST00000215637 GAPVD1Q14C86 1478 aa34.48■■■■□ 3.11
MADCAM1-201ENST00000215637 GRIN2BQ13224 1484 aa34.42■■■■□ 3.1
MADCAM1-201ENST00000215637 KIF27Q86VH2 1401 aa34.4■■■■□ 3.1
MADCAM1-201ENST00000215637 PBRM1Q86U86 1689 aa34.4■■■■□ 3.1
MADCAM1-201ENST00000215637 RUSC2Q8N2Y8 1516 aa34.33■■■■□ 3.09
MADCAM1-201ENST00000215637 SNAPC4Q5SXM2 1469 aa34.33■■■■□ 3.09
MADCAM1-201ENST00000215637 MAGI1Q96QZ7 1491 aaPredicted RBP34.29■■■■□ 3.08
MADCAM1-201ENST00000215637 ERICH3Q5RHP9 1530 aa34.29■■■■□ 3.08
MADCAM1-201ENST00000215637 FBLN2P98095 1184 aa34.24■■■■□ 3.07
MADCAM1-201ENST00000215637 IGF1RP08069 1367 aa34.19■■■■□ 3.06
MADCAM1-201ENST00000215637 CHMP7Q8WUX9 453 aaPredicted RBP34.18■■■■□ 3.06
MADCAM1-201ENST00000215637 EEA1Q15075 1411 aa34.17■■■■□ 3.06
MADCAM1-201ENST00000215637 CHD1O14646 1710 aa34.17■■■■□ 3.06
MADCAM1-201ENST00000215637 OSCARQ8IYS5 282 aa34.16■■■■□ 3.06
MADCAM1-201ENST00000215637 SYNJ2O15056 1496 aa34.16■■■■□ 3.06
MADCAM1-201ENST00000215637 ADAMTS12P58397 1594 aa34.15■■■■□ 3.06
MADCAM1-201ENST00000215637 CUL7Q14999 1698 aa34.12■■■■□ 3.05
MADCAM1-201ENST00000215637 FHAD1B1AJZ9 1412 aa34.09■■■■□ 3.05
MADCAM1-201ENST00000215637 DNAJC5Q9H3Z4 198 aa34.05■■■■□ 3.04
MADCAM1-201ENST00000215637 FAM9AQ8IZU1 332 aaPredicted RBP34.03■■■■□ 3.04
MADCAM1-201ENST00000215637 CSRNP3Q8WYN3 585 aa34■■■■□ 3.03
MADCAM1-201ENST00000215637 CARMIL1Q5VZK9 1371 aa33.99■■■■□ 3.03
MADCAM1-201ENST00000215637 GRIN2AQ12879 1464 aa33.98■■■■□ 3.03
MADCAM1-201ENST00000215637 PRXQ9BXM0 1461 aa33.94■■■■□ 3.02
MADCAM1-201ENST00000215637 RAPGEF2Q9Y4G8 1499 aa33.88■■■■□ 3.01
MADCAM1-201ENST00000215637 KIF21BO75037 1637 aa33.82■■■■□ 3
MADCAM1-201ENST00000215637 NUP160Q12769 1436 aa33.8■■■■□ 3
MADCAM1-201ENST00000215637 CEP170Q5SW79 1584 aa33.78■■■■□ 3
MADCAM1-201ENST00000215637 CLASP1Q7Z460 1538 aa33.77■■■■□ 3
MADCAM1-201ENST00000215637 GOLGA3Q08378 1498 aa33.64■■■□□ 2.98
Retrieved 100 of 20,778 RNA–protein pairs in 58.5 ms